Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 93,764 (bp)   Positions: 258
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
MR/N (KNAW) 
.001
.0
.0
.997
.207
.02
1.0
.005
.0
.0
.003
.005
.0
.011
.046
.002
.001
.0
.001
.0
.001
.01
.001
.032
--
.006
.002
.003
.008
.0
.003
.001
.257
.0
.019
.0
.002
.0
.999
1.0
.79
.026
.001
.03
.001
.002
.001
.03
.832
.01
.0
.001
.003
.003
.0
.0
.001
.17
.012
.012
.03
.032
.005
.011
.096
.001
.0
.014
.01
.004
.105
.199
.236
.0
.001
.012
.003
.0
.002
.001
.114
.1
.096
.0
.001
.0
.002
.05
.001
.0
.055
.008
.0
.003
.011
.002
.012
.039
.023
.025
.003
.005
.539
.328
.93
.007
.024
.105
.0
.0
.003
.042
.05
.017
.038
.002
.0
.001
.064
--
.075
.0
.003
.006
.0
.002
.475
.505
.98
.96
.03
.184
.001
.229
.001
.125
.0
.026
.0
.0
.043
.026
.002
.451
.004
.003
.028
.025
.014
.0
.056
.003
.004
.0
.0
.0
.004
.011
.069
.005
.006
.0
.001
.043
.008
.008
.234
.159
.069
.011
.001
.0
.001
.111
.002
.0
.976
.191
.283
.0
.956
.003
.001
.023
.004
.001
.01
.001
.001
.0
.984
.054
.016
.001
.172
.056
.003
.019
.079
.098
.992
.011
.015
.763
.691
.144
.002
.0
.0
.14
.003
.014
.012
.0
.001
.001
.003
.0
.067
.033
.038
.059
.075
.388
.097
.047
--
--
--
--
--
--
--
--
--
.008
.001
.0
.011
.0
.043
.019
.035
.003
.012
.022
.15
.015
.003
.014
.027
.628
1.0
.992
.001
.962
.014
.002
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
C
T
C
2
G
C
A
G
C
G
T
G
C
T
C
T
C
A
A
T
C
C
A
T
G
T
G
C
G
T
G
G
T
T
T
T
T
3
T
G
A
T
C
T
T
C
T
A
2
T
A
A
T
T
A
T
G
G
C
A
C
G
C
A
C
T
G
C
C
T
C
C
G
T
C
C
G
A
A
C
C
C
A
G
T
T
G
T
A
T
T
A
3
A
T
G
C
A
2
C
G
A
G
G
C
G
2
A
C
T
A
G
G
C
G
A
C
G
C
A
G
A
T
C
T
T
A
2
28
G
C
A
C
T
A
G
G
G
A
C
C
A
A
G
C
T
C
G
A
G
C
C
T
C
C
G
G
G
G
T
A
T
T
A
G
A
T
G
C
G
A
G
C
5
C
A
A
T
A
G
G
G
G
G
C
8
C
C
A
T
T
T
A
C
G
A
G
C
T
T
C
A
A
T
A
G
A
C
G
T
A
T
T
G
C
G
T
A
C
T
G
A
T
A
A
C
G
A
T
G
G
G
T
T
C
3
G
T
T
G
C
T
G
A
T
G
C
C
T
A
A
T
A
C
T
T
C
  128,739,546
  128,742,286
  128,742,313
  128,742,542
  128,743,117
  128,743,636
  128,746,980
  128,747,886
  128,749,632
  128,749,658
  128,753,551
  128,755,705
  128,756,370
  128,756,648
  128,757,052
  128,757,114
  128,760,084
  128,761,147
  128,761,278
  128,762,872
  128,762,930
  128,762,942
  128,763,012
  128,763,689
  128,764,249
  128,764,670
  128,764,964
  128,764,969
  128,765,435
  128,765,794
  128,766,107
  128,766,550
  128,766,615
  128,767,444
  128,767,512
  128,767,984
  128,768,099
  128,768,112
  128,768,313
  128,768,345
  128,768,920
  128,769,582
  128,769,679
  128,769,693
  128,769,895
  128,772,351
  128,772,710
  128,772,894
  128,774,166
  128,774,638
  128,774,673
  128,774,675
  128,774,681
  128,774,838
  128,774,874
  128,775,148
  128,775,444
  128,775,827
  128,776,036
  128,776,119
  128,776,301
  128,776,842
  128,777,022
  128,778,255
  128,778,450
  128,778,763
  128,779,104
  128,779,302
  128,779,701
  128,779,764
  128,782,338
  128,782,367
  128,782,519
  128,782,774
  128,782,994
  128,783,221
  128,783,307
  128,783,621
  128,783,855
  128,783,941
  128,784,981
  128,785,097
  128,785,318
  128,786,039
  128,786,125
  128,786,492
  128,786,829
  128,787,480
  128,787,906
  128,788,084
  128,788,177
  128,788,592
  128,788,724
  128,788,913
  128,789,379
  128,793,684
  128,796,105
  128,796,179
  128,796,348
  128,799,875
  128,800,984
  128,801,968
  128,803,530
  128,803,661
  128,803,757
  128,803,950
  128,804,010
  128,804,396
  128,804,640
  128,804,831
  128,804,956
  128,804,977
  128,805,120
  128,805,131
  128,805,215
  128,805,466
  128,805,519
  128,805,952
  128,806,523
  128,806,617
  128,806,850
  128,807,314
  128,807,414
  128,807,557
  128,807,969
  128,808,637
  128,808,668
  128,808,669
  128,808,761
  128,808,766
  128,808,972
  128,809,408
  128,810,269
  128,810,402
  128,810,498
  128,810,684
  128,810,691
  128,810,716
  128,810,726
  128,810,828
  128,810,836
  128,810,845
  128,810,994
  128,811,261
  128,811,314
  128,811,529
  128,811,632
  128,811,927
  128,812,016
  128,812,397
  128,812,667
  128,812,785
  128,812,905
  128,812,959
  128,812,978
  128,813,053
  128,813,145
  128,813,248
  128,813,287
  128,813,438
  128,813,533
  128,813,780
  128,813,883
  128,813,938
  128,814,321
  128,814,609
  128,814,644
  128,814,724
  128,814,734
  128,815,009
  128,815,113
  128,815,301
  128,815,416
  128,816,800
  128,816,967
  128,817,297
  128,817,589
  128,818,311
  128,818,514
  128,818,560
  128,818,734
  128,818,936
  128,819,005
  128,819,041
  128,819,219
  128,819,292
  128,819,399
  128,819,520
  128,820,048
  128,820,051
  128,820,283
  128,820,332
  128,820,737
  128,820,750
  128,820,894
  128,820,898
  128,820,914
  128,820,930
  128,821,017
  128,821,027
  128,821,141
  128,821,202
  128,821,203
  128,821,220
  128,821,222
  128,821,363
  128,821,484
  128,821,489
  128,821,524
  128,821,534
  128,821,557
  128,821,629
  128,821,695
  128,821,719
  128,821,726
  128,821,757
  128,821,779
  128,821,790
  128,821,797
  128,821,939
  128,821,973
  128,821,993
  128,822,065
  128,822,342
  128,822,439
  128,822,483
  128,822,708
  128,822,773
  128,822,848
  128,822,881
  128,822,974
  128,823,048
  128,823,064
  128,823,099
  128,823,182
  128,823,269
  128,823,278
  128,823,313
  128,823,319
  128,823,573
  128,823,845
  128,824,067
  128,824,083
  128,824,092
  128,824,103
  128,824,392
  128,824,509
  128,824,852
  128,825,295
  128,825,694
  128,826,070
  128,828,528
  128,828,711
  128,829,648
  128,831,322
  128,832,086
  128,832,289
  128,832,531
T/2
C/G
C
G
-
-
T
A/2
A
T
A
G
A
T
-
G
C
-
C
2
G
T
C/T
T
C
A
C
A
5
A
-
T
A
4
C
C
G
C
-
4
C
C
C
T
C
C
T
A
G
-
C
G
4
G
T/C
C
G
T
A
G
G
A
A
T
2
T
G
T
T
T
A
T
T
A
C
A
T
A
C
C
C/T
G
T
A/-
C
C
2
A
C
2
C
C
2
-
C
C
T
T
AT/6
-
T
A
-
2
A
G
T
-
G
T
A
T
A
A
A
C
G
T
A
T
G
A
G
A
T
C
A
G
2/-
-
A
G
A/G
T
A
G
A
2
A
G
C/T
C/T
T
T
A
T
C
T
A
G
A
G
A
C
T
T
A
A
A
2
C
G
A
C
C
T
G
C
T
T
A
G
A
T
-
T
G
G
T/A
G
3
C
A
A
C
G
-
T
T
T
C
T/2
A
G
T
T
C
A
T
C
A
C/T
A/G
G
G
G
A
G
T
17
-
T
G
C
A
G
11
C
G
G
C
A
G
G
C
G
A
T
G
C
G/C
G/A
C
C
C
T
-
A
C
A
T
T
A
T
T
C
A
A
A
G
-
A/3
2
A/2
A
G
C
T