Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 25,843 (bp)   Positions: 91
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SBH/Ygl (KNAW) 
.996
.063
.071
.787
.001
.204
.261
.363
.021
.033
.101
.023
.001
--
--
.003
.013
--
--
--
.008
.005
.005
.001
.087
.108
.154
.013
.001
.39
--
.466
.13
.007
.018
--
.117
.028
.022
.094
.127
.053
.005
.014
.437
--
.038
.013
.001
.127
.0
.025
.0
.065
.001
.007
.039
.0
.007
.003
.061
.713
.106
.585
.449
.054
.057
.059
.059
.056
.036
.618
.008
.002
.379
.164
.343
.314
.004
--
--
.189
--
--
.003
.074
--
.593
.978
.0
.244
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
Fastkd1
C
T
T
8
T
A
T
C
C
C
T
A
G
36
117
C
A
C
T
2
G
C
T
G
T
T
G
C
T
G
C
T
T
A
G
A
A
G
C
4
2
T
G
T
C
G
32
T
G
A
G
C
A
6
T
A
G
G
G
A
C
A
A
A
G
A
A
A
A
A
2
A
T
G
T
G
5
4
T
T
C
T
A
A
2
161
T
G
3
T
C
  62,537,724
  62,538,145
  62,538,396
  62,539,009
  62,539,293
  62,539,379
  62,539,415
  62,539,430
  62,539,817
  62,540,788
  62,540,888
  62,541,360
  62,541,920
  62,542,717
  62,542,772
  62,543,195
  62,543,259
  62,543,503
  62,543,622
  62,543,674
  62,543,717
  62,544,227
  62,544,716
  62,544,975
  62,544,998
  62,545,001
  62,545,026
  62,545,373
  62,546,741
  62,547,402
  62,547,456
  62,547,773
  62,548,649
  62,548,741
  62,549,460
  62,549,684
  62,550,207
  62,550,466
  62,550,846
  62,550,861
  62,550,863
  62,551,263
  62,552,871
  62,552,934
  62,553,109
  62,553,325
  62,553,497
  62,553,664
  62,553,806
  62,553,910
  62,554,170
  62,554,248
  62,554,258
  62,554,589
  62,554,855
  62,555,095
  62,555,102
  62,555,158
  62,555,183
  62,555,218
  62,555,348
  62,555,412
  62,555,415
  62,556,103
  62,556,131
  62,556,159
  62,556,161
  62,556,164
  62,556,167
  62,556,170
  62,556,337
  62,556,484
  62,556,546
  62,557,018
  62,557,314
  62,557,745
  62,558,079
  62,558,080
  62,558,447
  62,558,985
  62,559,049
  62,559,083
  62,559,642
  62,559,707
  62,560,211
  62,560,684
  62,561,088
  62,561,448
  62,561,851
  62,562,273
  62,562,672
A
C
C
8/-
C
G
C
T
T
T
A
T
A
-
-
-
G
T
C
-
7
T
-
A
C
C
A
A
2
19/17
5/6
C
7/9
G
A
25
-
A
G
4/-
-
C
A
C
T
14/15
-
-
A
G
A
G
C
-
28
G
A
A
T
G
T
G
G
5
A
2
6/3
C
C
A/C
2/-
3
A
A
A
A
5/-
4/-
C
-
T
100
G
G
2/-
-
A
A
-
G
T