Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 46,843 (bp)   Positions: 155
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SBN/Ygl (KNAW) 
.044
.304
.268
.004
.014
.229
.001
.002
.012
.014
.016
.0
.012
.011
.0
.004
.998
.0
.006
.01
.002
.0
.0
.0
.001
.001
.0
.0
.035
.004
.01
.001
.001
.0
.031
.006
.0
.001
.995
.998
.008
.043
1.0
.063
.001
.042
--
--
--
.016
.028
.018
.05
.112
--
--
--
--
--
--
--
--
.015
.007
.001
.023
.147
.008
.155
.001
.0
.066
.22
.004
.024
.048
.003
.044
.009
.001
.001
.003
.0
.129
.003
.194
.001
.01
.0
.003
.001
.001
.0
.012
.009
.501
.007
.033
.462
--
--
--
--
--
--
.291
.283
.017
.037
.35
.304
.129
.002
.133
.104
.0
.021
.001
.02
.002
.003
.0
.008
.0
.015
.01
.038
.019
.014
.021
.327
.328
.253
--
.039
.035
.038
.021
.005
.057
.067
.059
.015
.174
.014
.031
.0
.0
.008
.003
.006
.0
.026
.126
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
Esyt3
T
G
T
A
G
2
T
A
G
G
G
G
C
C
G
G
A
G
A
T
C
C
T
C
G
G
G
T
G
G
G
C
C
G
C
G
T
G
T
A
C
G
T
G
G
T
G
C
A
12
10
C
A
T
A
C
A
A
G
C
G
2
A
G
G
A
C
G
3
A
C
A
G
C
G
C
C
T
A
A
A
A
T
T
A
T
A
C
T
G
6
G
G
T
T
T
G
A
6
A
G
C
4
2
T
A
T
T
T
C
C
C
G
C
G
C
T
C
T
G
G
A
T
T
4
A
C
G
T
A
T
15
G
T
G
T
A
A
T
C
6
C
A
G
G
T
C
T
G
G
T
G
4
7
T
  106,981,464
  106,981,520
  106,981,947
  106,982,232
  106,982,424
  106,982,441
  106,982,474
  106,983,637
  106,984,396
  106,984,397
  106,984,417
  106,984,446
  106,985,026
  106,987,588
  106,987,933
  106,988,275
  106,988,635
  106,988,723
  106,988,741
  106,988,959
  106,989,204
  106,989,247
  106,989,282
  106,989,849
  106,989,950
  106,989,955
  106,990,371
  106,990,529
  106,990,721
  106,991,052
  106,991,055
  106,991,061
  106,991,093
  106,991,696
  106,991,729
  106,991,865
  106,992,371
  106,992,614
  106,992,949
  106,992,958
  106,993,209
  106,993,412
  106,993,743
  106,994,655
  106,994,939
  106,995,320
  106,995,415
  106,995,421
  106,995,520
  106,995,722
  106,995,724
  106,996,444
  106,996,524
  106,996,585
  106,996,682
  106,996,727
  106,996,952
  106,996,954
  106,996,955
  106,996,958
  106,996,995
  106,997,129
  106,997,187
  107,000,600
  107,000,668
  107,001,201
  107,001,959
  107,002,936
  107,003,281
  107,003,814
  107,004,188
  107,004,254
  107,005,520
  107,006,047
  107,006,074
  107,006,162
  107,006,346
  107,006,381
  107,006,436
  107,006,532
  107,006,585
  107,006,644
  107,006,756
  107,006,851
  107,006,887
  107,007,296
  107,007,766
  107,007,898
  107,008,011
  107,008,854
  107,009,047
  107,009,322
  107,009,889
  107,009,909
  107,010,078
  107,010,325
  107,010,679
  107,010,758
  107,011,312
  107,011,737
  107,012,027
  107,012,035
  107,012,112
  107,012,114
  107,012,146
  107,012,319
  107,012,320
  107,012,416
  107,013,170
  107,014,338
  107,014,486
  107,014,704
  107,014,810
  107,015,373
  107,015,394
  107,015,657
  107,015,794
  107,015,839
  107,015,963
  107,016,790
  107,016,890
  107,016,893
  107,016,950
  107,016,998
  107,017,582
  107,017,634
  107,017,705
  107,018,156
  107,018,698
  107,018,899
  107,018,980
  107,018,983
  107,019,380
  107,020,575
  107,020,664
  107,020,739
  107,020,740
  107,021,243
  107,021,269
  107,021,530
  107,021,543
  107,021,607
  107,021,840
  107,021,861
  107,022,200
  107,022,509
  107,023,327
  107,023,612
  107,024,860
  107,025,167
  107,025,311
  107,025,567
  107,026,354
  107,026,397
  107,026,890
C
A
5
G
C
-
7
G
T
4
A
A
T
A
A
A
G
7
G
C
A
T
C
T
A
C
C
C
A
A
A
T
T
2
T
2
C
A
C
G
2
A
C
T
A
C
A
T
-
12/-
10/-
T
T
G
G
A
G
C
A
T
A
-
G
A
A
2
G
A
-
10
A
G
C
A
C
T
T
C
G
C
G
G
A
C
T
C
G
T
G
A
-
C
A
C
C
2
GA/3
G
-
C
3
3
4/-
2/-
C
6
A
C
C
A
T
T
7/5
3
A
T
-
T
C
C
2
2
C
C
-
G
7/9
A
C
G
C
-
A
2
A
G
G
G
C
T
-
G
G
A
A
G
T
C
A
A
G
A
-
-
C