Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 435,481 (bp)   Positions: 57
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LE/Stm (KyushuU) 
.962
.005
.01
.039
.983
.998
.998
.975
.707
.85
.612
.0
.0
.002
.027
.0
1.0
.999
.846
.955
.943
.982
1.0
.001
.05
.003
.423
1.0
.993
.269
.156
.521
.534
.001
.002
.974
.992
1.0
.0
.004
.239
.011
.143
.992
.947
.972
.435
.012
.072
.983
1.0
.039
1.0
.144
.193
.859
.149
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ephb1
Ephb1
Ephb1
Ephb1
Ephb1
Ephb1
G
C
A
A
G
A
C
C
T
G
G
T
G
A
T
T
G
G
A
T
C
C
A
T
A
C
G
A
T
A
C
T
C
A
A
G
T
T
2
C
C
A
G
A
G
C
C
G
G
A
T
G
T
T
C
T
T
  109,783,475
  109,785,225
  109,792,083
  109,801,200
  109,807,356
  109,829,687
  109,851,494
  109,851,578
  109,853,736
  109,863,694
  109,865,113
  109,878,524
  109,878,698
  109,878,721
  109,879,372
  109,905,744
  109,907,776
  109,926,475
  109,931,252
  109,939,302
  109,939,477
  109,941,560
  109,945,714
  109,949,225
  109,952,232
  109,952,241
  109,957,050
  109,957,088
  109,976,581
  110,004,703
  110,031,842
  110,036,458
  110,047,419
  110,048,375
  110,049,435
  110,056,561
  110,079,770
  110,079,893
  110,084,060
  110,084,063
  110,098,359
  110,128,490
  110,128,665
  110,136,283
  110,145,167
  110,147,791
  110,156,446
  110,156,545
  110,156,546
  110,166,014
  110,166,029
  110,167,612
  110,169,578
  110,171,399
  110,178,759
  110,198,262
  110,215,765
G/T
C/7
A/G
A/T
G/A
A/2
C/G
C/T
T/C
G/A
G/A
T/C
G/A
A/-
T/C
T/G
G/A
G/2
A/G
T/-
C/T
C/T
A/G
T/8
A/C
CA/A
G/A
A/10
T/C
A/G
C/T
T/C
C/2
A/-
A/G
G/C
T/C
T/C
2/-
C/T
C/T
A/-
G/T
A/3
G/A
C/T
C/G
G/2
G/T
A/G
T/C
G/C
T/C
T/C
C/T
T/C
T/C