Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 63,389 (bp)   Positions: 84
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NHsd (KNAW) 
.0
.0
.001
.0
.001
.711
.0
.004
.001
.269
.482
.025
.912
.003
.038
.007
.001
.525
.03
.002
.001
.001
.011
.564
.044
--
--
.001
.002
.009
.002
.12
.126
.001
.019
.013
.282
.005
.0
.003
.008
.007
.001
.003
.001
.0
.002
.005
.14
.121
.046
.043
.099
.0
.0
.001
.006
--
.0
.001
.051
.476
.059
.009
.115
.0
.008
.0
.031
.0
.009
.021
.002
--
--
--
.982
.969
.001
.059
.071
.0
.002
.003
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Elk3
Elk3
Elk3
Elk3
Elk3
Elk3
Elk3
Elk3
Elk3
T
C
T
G
A
G
C
C
G
C
A
A
49
T
2
C
G
G
G
T
C
A
A
C
C
14
12
C
G
G
T
A
4
C
C
T
T
6
T
A
2
G
T
T
T
T
T
T
T
A
T
T
4
T
T
C
T
G
20
18
A
G
4
A
2
C
A
T
C
2
T
C
C
C
2
35
C
T
C
G
A
C
12
8
  34,152,192
  34,152,308
  34,152,331
  34,152,390
  34,152,399
  34,152,660
  34,153,134
  34,153,187
  34,153,190
  34,153,242
  34,153,389
  34,153,391
  34,153,730
  34,153,966
  34,154,878
  34,155,736
  34,157,152
  34,157,365
  34,157,616
  34,157,676
  34,158,080
  34,158,889
  34,159,123
  34,159,415
  34,160,969
  34,160,980
  34,160,982
  34,161,136
  34,162,566
  34,162,623
  34,162,914
  34,163,445
  34,163,446
  34,164,162
  34,164,593
  34,164,673
  34,164,826
  34,165,447
  34,166,708
  34,167,164
  34,167,204
  34,168,863
  34,169,470
  34,169,484
  34,169,934
  34,169,998
  34,170,823
  34,170,966
  34,171,027
  34,171,200
  34,171,213
  34,171,357
  34,171,524
  34,172,615
  34,172,619
  34,172,991
  34,173,226
  34,176,981
  34,177,588
  34,177,590
  34,179,903
  34,183,266
  34,183,965
  34,184,425
  34,185,393
  34,185,539
  34,186,119
  34,186,621
  34,187,767
  34,190,330
  34,191,671
  34,191,745
  34,194,141
  34,194,464
  34,194,473
  34,194,654
  34,194,781
  34,194,789
  34,196,061
  34,202,293
  34,204,202
  34,211,750
  34,212,248
  34,212,252
C
3
C
T
T
A
T
T
T
T
G
G
-
C
-
T
T
A
C
A
G
G
G
T
T
14/-
12/-
T
?
A
C
A/9
-
A
G
4
G
-
C
C
-
A
C
C
G
C
G
C
G
2
C
C
-
C
C
T
25
13
-
18/-
G
T
-
T
-
A
G
C
3
-
G
2
T
-
-
-
-
-
G
G/9
A/3
15
12/-
8/-