Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 52,546 (bp)   Positions: 174
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/EurMcwi (MCW) 
.0
.001
.001
.035
.001
.0
1.0
.062
.003
.006
.186
.0
.002
.001
.0
.0
.026
.004
.001
.055
.001
.011
.005
.533
.001
.025
.003
.049
.193
.001
.083
.0
.023
.005
.009
.009
.008
.001
.001
.001
.024
.097
.119
.573
.03
.113
.001
.007
.0
.293
.299
.206
.255
.25
.218
.018
.021
.002
.0
.0
.002
.0
.001
.001
.01
.09
.001
.008
.01
.371
.183
.003
.02
.008
.0
.002
.0
.05
.032
.037
.041
.258
.038
.003
.016
.352
.175
.16
.37
.266
.029
.016
.018
--
--
--
.102
.445
.429
.381
.013
.094
.013
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.194
.488
.198
.013
.504
.004
.114
.133
.07
.172
.001
.008
.001
.0
.001
.02
.001
.001
.003
.041
--
--
--
--
--
--
.004
.034
.081
.01
.0
.0
.077
--
--
.01
.013
.001
.254
.011
.235
.094
.004
.003
.013
--
--
.028
.123
.242
.001
.098
.0
.127
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
Dcps
T
T
T
T
C
A
T
A
T
T
A
G
G
T
G
G
T
C
T
A
G
G
G
C
G
A
A
T
4
C
A
T
G
T
C
3
2
G
A
A
T
A
A
G
G
G
C
T
T
A
2
A
T
C
G
G
T
G
T
G
A
G
G
A
C
C
T
G
G
A
T
A
C
T
T
C
T
C
C
G
C
G
T
A
T
T
A
3
C
C
A
T
3
G
G
C
2
T
T
G
G
C
G
A
C
A
T
G
A
A
G
A
G
C
C
G
A
C
C
C
A
C
T
G
G
T
C
T
C
G
G
A
G
T
T
G
A
A
G
C
G
C
A
C
T
C
G
G
T
A
G
A
T
G
G
A
2
C
T
T
A
2
2
T
A
C
G
G
T
A
T
A
T
T
  36,341,601
  36,341,797
  36,341,871
  36,341,879
  36,342,274
  36,342,431
  36,342,740
  36,342,885
  36,343,407
  36,343,719
  36,344,282
  36,344,691
  36,345,611
  36,345,655
  36,346,100
  36,346,334
  36,346,488
  36,346,776
  36,346,794
  36,347,204
  36,347,254
  36,347,682
  36,348,065
  36,348,198
  36,348,254
  36,348,524
  36,348,546
  36,349,052
  36,349,099
  36,349,246
  36,349,306
  36,349,429
  36,349,952
  36,350,234
  36,350,252
  36,350,444
  36,350,445
  36,350,714
  36,350,870
  36,350,871
  36,351,281
  36,351,349
  36,351,574
  36,351,629
  36,351,735
  36,351,841
  36,352,044
  36,353,466
  36,353,677
  36,353,991
  36,354,172
  36,354,275
  36,354,522
  36,354,526
  36,354,567
  36,354,822
  36,354,950
  36,355,268
  36,355,297
  36,355,637
  36,355,691
  36,355,872
  36,355,897
  36,355,924
  36,355,927
  36,356,293
  36,356,528
  36,356,834
  36,356,850
  36,356,912
  36,356,942
  36,357,221
  36,357,494
  36,357,565
  36,357,779
  36,357,808
  36,358,143
  36,358,260
  36,358,535
  36,358,539
  36,358,653
  36,358,868
  36,359,169
  36,359,387
  36,359,807
  36,360,493
  36,360,640
  36,360,649
  36,360,879
  36,360,892
  36,360,948
  36,363,173
  36,363,392
  36,363,405
  36,363,408
  36,363,453
  36,363,598
  36,363,696
  36,363,699
  36,363,708
  36,363,776
  36,364,036
  36,364,397
  36,366,002
  36,366,146
  36,366,148
  36,366,162
  36,366,348
  36,366,398
  36,366,760
  36,367,046
  36,367,362
  36,367,456
  36,368,022
  36,368,324
  36,368,339
  36,368,346
  36,368,364
  36,368,474
  36,368,615
  36,369,097
  36,370,283
  36,370,600
  36,370,795
  36,371,273
  36,371,311
  36,371,748
  36,371,750
  36,371,946
  36,372,020
  36,372,153
  36,373,271
  36,373,295
  36,373,405
  36,373,418
  36,374,109
  36,374,163
  36,374,164
  36,374,288
  36,374,346
  36,374,741
  36,374,809
  36,374,976
  36,375,292
  36,375,373
  36,375,513
  36,377,114
  36,377,343
  36,377,383
  36,381,167
  36,381,325
  36,383,691
  36,384,774
  36,384,921
  36,386,127
  36,387,776
  36,387,795
  36,388,196
  36,389,378
  36,389,413
  36,390,575
  36,391,019
  36,391,099
  36,391,124
  36,391,149
  36,391,304
  36,391,324
  36,391,475
  36,391,735
  36,392,249
  36,392,403
  36,392,746
  36,393,002
  36,393,086
A
3
C
A
G
G
T/G
C
C
C
G
2
C
C
A
2
C
T
C
G
-
A
A
T
A
G
G
C
-
T
G
C
A
C
T
3/-
2/-
A
G
G
C
2
G
A
A
A
G
C
C
C
-
C
C
T
T
A
C
T
C
T
-
C
A
G
2
T
C
T
-
-
G
G
A
C
G
T
C
T
T
A
T
A
18
G
C
C
G
-
T
T
G
A
-
G/C
G/C
T
-
G
G
G/T
A
T
C
G
C/-
3
C
A
G
T
A
T
-
T
T
A
T
A
T
T
G
G
T/G
T
C
C
T
C
A
2
A
G
A
C
T/G
A
G
G
A
G
A
T
G
T
-
T
A
T
3/5
A/-
G/5
G
C
A
2
G
-
T
C/5
2
C
-
-
C
G
C/G
G/A
GT/3
-
G
3
G
C
C