Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 41,815 (bp)   Positions: 136
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
M520/N (KNAW) 
.006
.019
.499
.09
.001
.119
.174
.068
.017
.019
.024
.014
.053
.01
.106
.986
.73
.352
1.0
--
--
--
.027
.029
.006
.014
.008
.01
.007
.002
.002
.0
.0
.0
.0
.168
.217
.02
.008
.009
.01
.779
.819
.019
.002
.176
.015
.008
.03
.016
.573
.406
.007
.057
.013
.092
.006
.009
--
.083
--
--
--
.049
.056
.013
1.0
1.0
.152
.0
.09
.294
.049
.024
.088
.44
.008
.018
.053
.082
.003
.033
.0
.0
.003
.042
.152
.144
.021
.153
.038
.029
.032
.012
.011
.009
.031
.117
.034
.21
.024
.003
.0
.032
--
.035
.054
.153
.159
.013
.006
.025
.072
.006
.007
.014
.005
.013
--
.01
.072
.063
.062
.025
.16
--
--
.023
.012
.012
.051
.017
.065
.073
.001
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
Daglb
T
A
A
A
A
G
C
G
C
G
A
C
T
T
C
G
A
C
C
G
4
G
G
A
G
G
A
C
T
T
T
A
C
C
A
T
T
G
A
G
C
C
C
T
A
C
G
A
A
A
C
C
C
T
G
G
12
T
T
G
T
A
G
T
G
C
A
C
G
T
G
A
C
G
G
T
T
G
A
112
G
T
A
A
T
C
A
T
T
C
G
G
C
2
A
C
C
C
A
C
G
A
C
C
A
T
T
A
T
A
C
C
T
G
A
C
T
G
115
A
C
G
C
G
G
C
T
C
G
G
A
A
T
A
G
T
  15,156,280
  15,156,418
  15,157,432
  15,159,072
  15,159,246
  15,159,374
  15,159,444
  15,160,919
  15,160,993
  15,160,995
  15,162,513
  15,164,325
  15,164,450
  15,165,066
  15,165,240
  15,165,397
  15,166,339
  15,166,400
  15,167,304
  15,168,067
  15,168,319
  15,168,625
  15,170,629
  15,170,836
  15,171,055
  15,171,063
  15,171,090
  15,171,091
  15,171,095
  15,171,109
  15,171,112
  15,171,114
  15,171,117
  15,171,120
  15,171,123
  15,171,187
  15,171,190
  15,171,339
  15,171,366
  15,171,389
  15,171,423
  15,171,553
  15,171,598
  15,171,809
  15,171,820
  15,171,860
  15,172,017
  15,172,037
  15,172,261
  15,172,391
  15,172,704
  15,173,471
  15,174,848
  15,175,376
  15,175,440
  15,175,839
  15,175,946
  15,176,014
  15,176,367
  15,177,008
  15,177,140
  15,177,399
  15,177,564
  15,178,226
  15,178,829
  15,179,062
  15,180,239
  15,180,242
  15,180,327
  15,180,388
  15,180,594
  15,180,692
  15,181,656
  15,182,274
  15,182,296
  15,182,350
  15,182,410
  15,182,453
  15,182,626
  15,182,691
  15,182,865
  15,183,059
  15,183,208
  15,183,367
  15,183,528
  15,183,750
  15,183,783
  15,183,786
  15,184,360
  15,184,380
  15,184,522
  15,184,651
  15,184,661
  15,184,717
  15,184,718
  15,184,746
  15,184,947
  15,185,163
  15,185,268
  15,185,286
  15,185,308
  15,185,466
  15,185,574
  15,185,718
  15,185,913
  15,186,359
  15,186,418
  15,186,437
  15,186,749
  15,187,487
  15,187,668
  15,188,961
  15,189,424
  15,190,641
  15,190,823
  15,192,523
  15,192,622
  15,192,879
  15,193,901
  15,194,187
  15,194,337
  15,194,454
  15,194,707
  15,194,832
  15,195,947
  15,196,042
  15,196,117
  15,196,256
  15,196,376
  15,196,787
  15,196,960
  15,196,966
  15,197,028
  15,197,230
  15,197,339
  15,197,700
C
T
G
G
G
C
C/T
A
4
-
G
C/13
T/A
G
A
G/A
G
C/T
A
A
-
A
G/A
2
C
2
2
T
2
A
-
G
2
A
-
2
A
A
G
A
A
T
T
C
G
C/T
A
G
T
G
C/T
3
T
T/C
3
A
-
C
C
A
C
G
C
A
A
C/T
G
T
A
T/C
A
G
T
G/A
A
C
G
45
G
112/-
A
C
G
A/G
G
C/A
G
4
A
T
C
T
T
-
A/T
T
T
T
G
T
A
A/G
T
T
72
4
G
A/20
C
G
T
-
3
3
A/G
T
T/C
A
-
G
G
A
T
A
A
T
C
T
A
T
G
T
T/-
G
A
G