Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 49,514 (bp)   Positions: 117
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
BUF/N (KNAW) 
.185
.158
.385
.23
.229
.028
.04
.024
.213
--
--
.014
.177
.037
.05
.074
.273
.44
.009
--
.002
.182
.003
.047
.053
.125
.076
.021
.003
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.074
.001
.589
.14
.01
.127
.047
.01
.002
.038
.009
.155
.308
.201
.091
.059
.726
.415
.016
.017
.713
.01
.07
.009
--
--
--
--
--
.001
.914
.108
.02
.077
.025
.001
.575
.017
.033
.029
.109
.061
.13
.032
.011
.039
.01
.04
.177
.106
--
--
--
.089
.011
--
--
--
--
.47
.121
.019
.205
.088
.006
.008
.825
.016
.352
.594
.023
.01
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
Cyp3a18
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
G
C
A
G
A
T
A
5
20
A
C
T
C
C
T
C
A
G
A
T
T
T
4
G
G
T
C
C
T
G
T
T
T
G
G
T
T
C
A
G
T
G
T
C
A
G
T
C
G
T
A
G
A
A
C
C
C
C
C
C
T
A
C
A
A
T
T
C
T
C
T
T
G
C
C
G
T
C
A
C
G
G
A
T
C
A
G
T
A
T
A
A
C
G
C
G
G
C
C
G
C
T
2
G
T
C
A
T
A
A
A
C
C
C
C
T
  12,738,438
  12,738,447
  12,738,525
  12,738,605
  12,738,609
  12,739,466
  12,739,470
  12,739,564
  12,739,654
  12,739,854
  12,740,072
  12,740,115
  12,740,339
  12,740,490
  12,740,505
  12,740,538
  12,740,620
  12,741,434
  12,741,686
  12,741,845
  12,741,860
  12,742,067
  12,746,816
  12,746,961
  12,747,138
  12,748,276
  12,748,375
  12,748,382
  12,748,383
  12,754,934
  12,755,429
  12,755,447
  12,756,110
  12,756,238
  12,756,342
  12,757,423
  12,757,443
  12,757,446
  12,757,645
  12,758,866
  12,759,598
  12,759,609
  12,759,627
  12,759,899
  12,759,935
  12,760,025
  12,760,451
  12,760,775
  12,760,806
  12,760,886
  12,760,993
  12,761,813
  12,762,011
  12,762,344
  12,763,209
  12,763,631
  12,764,837
  12,764,971
  12,765,080
  12,765,347
  12,765,714
  12,765,943
  12,766,632
  12,767,206
  12,767,243
  12,769,011
  12,769,379
  12,769,499
  12,769,688
  12,769,911
  12,769,927
  12,770,051
  12,770,184
  12,770,618
  12,770,964
  12,771,184
  12,771,412
  12,771,479
  12,771,682
  12,771,826
  12,772,421
  12,772,435
  12,772,649
  12,772,794
  12,773,275
  12,773,388
  12,773,416
  12,773,448
  12,773,935
  12,773,940
  12,774,048
  12,774,443
  12,774,578
  12,774,637
  12,775,137
  12,777,338
  12,777,465
  12,778,150
  12,778,215
  12,778,923
  12,779,080
  12,779,156
  12,780,270
  12,781,377
  12,782,416
  12,782,602
  12,783,142
  12,783,248
  12,783,309
  12,783,560
  12,783,653
  12,784,143
  12,785,091
  12,785,150
  12,786,013
  12,786,230
  12,786,358
G/A
2
A
G
A
G
C
C
-
-
T
T
-
C/T
T
C
C/A
A/G
T
G
C
C
C
-
A
10
4
3
G
C
A
10
2
C
A
C
T/-
T/A
T
G
-
C
T
G
T
T
A
C
T
A
C
G
T
C
G
T
2
C/T
T
T
A
-
G
G
T
3
C
T/C
A
C
T
T/C
A
A
T
A
A
C
T
G
T
G/A
A
T
C
T
G
T
C
G
C
G
C
C/T
A
T
T
-
A
T
A
C/A
C
-
T
C
C/T
-
C
T
A/2
-
C/T
2
A
A
G