Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 142,590 (bp)   Positions: 362
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.997
.27
.479
.003
.001
.005
.011
.006
.0
.001
.003
.048
.001
.003
.022
.009
.015
.013
.0
.001
.002
.005
.001
.0
.543
.298
.002
.01
.009
.013
.059
.0
.02
.005
.001
.004
.0
.002
.614
.003
.187
.209
.143
.043
.012
.0
.038
.018
.001
.002
.0
.001
.001
.006
.001
.0
1.0
.0
.0
.0
.002
.998
.0
.001
--
--
.042
.012
.005
.337
.001
.114
.479
.001
.018
.045
.055
.075
.011
.006
.001
.002
.023
.108
--
--
--
.106
.003
.0
.012
.002
.002
.994
.004
.976
.008
.008
.001
.115
.99
.785
.002
.054
.001
.048
.0
.002
.0
.001
.204
.386
.004
.06
.015
.007
.003
.0
.0
.091
.037
.012
.003
.056
.004
--
--
--
--
--
.0
.001
.011
.017
.025
.129
.03
.174
.367
.006
.006
.265
.01
.005
.005
.522
.999
.0
.0
--
--
.981
.086
.01
.001
.008
.002
.023
.151
.0
.001
.021
.0
.003
.001
.868
.004
.0
.001
.127
.019
.0
.506
.003
.003
.07
.003
.01
.007
.003
.0
.005
.997
.005
.016
.007
.001
.47
.016
.888
.063
.055
.217
.095
.214
.008
.037
.041
.008
.143
.004
.0
.95
.0
.002
.008
.001
.009
.007
.01
.001
.005
.011
.02
.006
.0
.026
.001
.0
.001
.403
.312
.253
.002
--
--
--
--
.004
.008
.001
.008
.019
.001
.241
.0
.96
.002
.002
.005
--
.002
.0
.002
.286
.256
.821
.003
.001
.001
.016
.003
.025
.0
.042
.002
.994
.941
.09
.0
.004
--
--
.491
.957
.001
.012
.001
.998
.047
.302
.004
.0
.029
.002
.191
.008
.001
.0
--
.674
.454
.001
.001
.002
.002
.0
.007
.0
.005
.772
1.0
.111
.002
.006
.0
.0
.106
.002
.083
.01
.429
.992
.002
.008
.238
.0
.084
.008
.037
.008
.254
.221
.04
.846
.833
.827
.011
.0
.0
.0
.001
.003
.001
.001
.159
.0
.0
.0
.001
.014
.0
.001
.0
.0
.127
.982
.001
.0
.0
.017
.384
.001
.001
.011
.013
.005
.0
.878
.015
.044
.002
.269
.002
.0
.001
.005
.0
.121
.02
.023
.084
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
Crtac1
A
G
T
C
T
T
C
3
G
A
T
G
T
G
T
T
C
T
T
G
G
G
G
T
A
C
C
C
G
A
C
C
C
T
T
G
C
T
C
C
C
A
T
A
G
G
5
C
C
A
G
A
T
C
T
T
C
A
G
C
G
A
T
C
2
T
C
C
C
A
G
T
T
C
T
G
T
C
C
G
A
C
T
C
A
C
G
A
C
C
A
G
C
C
8
A
G
A
G
T
T
T
A
T
A
A
T
G
T
C
C
G
C
G
G
2
G
C
A
G
A
T
C
A
A
T
T
G
A
3
T
A
C
A
A
G
A
G
T
G
T
C
G
A
A
T
T
A
A
A
A
G
8
T
C
2
G
T
G
G
C
T
A
A
A
A
G
A
A
A
C
C
T
T
G
A
C
G
C
A
C
T
A
T
G
T
C
G
A
C
C
T
A
G
T
A
2
A
2
A
A
T
G
A
T
G
G
A
G
C
A
T
T
T
T
A
T
A
C
A
T
T
A
T
G
G
G
G
A
A
A
G
C
G
2
C
A
T
G
A
A
A
G
12
C
T
C
G
A
C
A
G
A
A
T
T
G
C
C
T
T
C
C
G
A
G
A
A
A
C
T
A
G
G
A
C
C
T
2
T
T
G
A
A
T
C
G
T
C
C
T
A
C
A
T
C
C
A
A
10
A
3
T
C
C
G
A
G
G
C
T
G
G
T
C
T
T
G
T
C
C
T
2
C
G
A
T
A
G
C
C
A
A
G
C
A
C
G
G
T
G
C
G
T
A
A
C
A
T
C
A
A
G
G
C
13
G
C
T
A
C
T
  268,979,499
  268,979,715
  268,979,838
  268,980,248
  268,980,410
  268,980,797
  268,980,983
  268,981,147
  268,981,796
  268,982,245
  268,983,005
  268,983,400
  268,984,238
  268,984,411
  268,984,466
  268,984,651
  268,984,814
  268,985,118
  268,986,870
  268,986,873
  268,987,106
  268,987,107
  268,987,331
  268,988,538
  268,988,926
  268,988,967
  268,989,265
  268,989,301
  268,989,307
  268,989,342
  268,989,386
  268,989,408
  268,989,459
  268,989,467
  268,989,538
  268,989,728
  268,989,969
  268,990,114
  268,990,215
  268,990,510
  268,990,670
  268,991,406
  268,991,481
  268,991,739
  268,992,401
  268,992,552
  268,993,093
  268,993,310
  268,993,515
  268,994,054
  268,994,205
  268,995,018
  268,995,126
  268,995,346
  268,995,388
  268,995,536
  268,995,764
  268,995,837
  268,996,182
  268,996,447
  268,998,482
  268,998,879
  268,999,039
  268,999,071
  268,999,852
  268,999,875
  269,000,012
  269,000,121
  269,000,223
  269,000,289
  269,000,400
  269,000,429
  269,000,573
  269,000,598
  269,000,714
  269,000,834
  269,000,836
  269,000,839
  269,001,563
  269,001,600
  269,002,032
  269,002,294
  269,002,385
  269,002,651
  269,002,816
  269,003,018
  269,003,031
  269,003,318
  269,003,596
  269,004,076
  269,004,553
  269,004,616
  269,009,094
  269,013,559
  269,017,958
  269,018,244
  269,020,965
  269,022,301
  269,027,603
  269,027,702
  269,028,018
  269,028,420
  269,029,558
  269,029,574
  269,029,838
  269,029,918
  269,030,330
  269,030,983
  269,031,181
  269,031,219
  269,031,397
  269,031,476
  269,031,770
  269,031,831
  269,031,911
  269,031,990
  269,032,400
  269,032,896
  269,033,254
  269,033,567
  269,033,655
  269,033,707
  269,033,817
  269,033,916
  269,034,118
  269,034,261
  269,034,331
  269,034,335
  269,034,405
  269,034,534
  269,034,908
  269,035,056
  269,035,245
  269,035,345
  269,035,470
  269,035,559
  269,035,780
  269,035,992
  269,036,232
  269,036,484
  269,036,640
  269,036,789
  269,037,272
  269,037,804
  269,037,806
  269,037,879
  269,037,967
  269,039,047
  269,039,631
  269,041,389
  269,041,452
  269,042,386
  269,042,588
  269,042,785
  269,042,815
  269,042,832
  269,044,180
  269,045,678
  269,046,816
  269,046,952
  269,046,986
  269,047,155
  269,047,254
  269,047,987
  269,048,243
  269,048,720
  269,049,223
  269,049,227
  269,049,248
  269,050,436
  269,050,753
  269,050,830
  269,051,667
  269,052,298
  269,052,623
  269,053,721
  269,054,225
  269,054,759
  269,055,106
  269,055,230
  269,055,282
  269,055,305
  269,055,639
  269,055,951
  269,056,147
  269,056,247
  269,056,290
  269,056,352
  269,056,436
  269,056,991
  269,057,095
  269,057,185
  269,057,233
  269,057,252
  269,057,456
  269,057,527
  269,057,542
  269,057,556
  269,057,579
  269,057,662
  269,057,881
  269,057,906
  269,058,356
  269,058,770
  269,058,993
  269,058,994
  269,059,154
  269,059,196
  269,059,583
  269,059,590
  269,059,730
  269,059,882
  269,059,908
  269,060,060
  269,060,342
  269,060,588
  269,060,799
  269,060,967
  269,061,475
  269,063,081
  269,063,807
  269,064,087
  269,064,089
  269,064,346
  269,065,416
  269,065,424
  269,065,436
  269,065,444
  269,066,562
  269,066,598
  269,066,664
  269,067,196
  269,068,087
  269,068,230
  269,068,511
  269,068,849
  269,069,367
  269,069,485
  269,071,119
  269,071,433
  269,071,506
  269,071,639
  269,071,743
  269,071,955
  269,072,225
  269,072,294
  269,072,522
  269,072,543
  269,072,797
  269,072,884
  269,073,293
  269,073,913
  269,073,933
  269,074,227
  269,075,457
  269,077,102
  269,077,844
  269,078,864
  269,079,143
  269,079,155
  269,079,204
  269,079,248
  269,079,276
  269,080,174
  269,080,383
  269,080,952
  269,081,056
  269,081,175
  269,081,269
  269,081,367
  269,081,548
  269,081,711
  269,081,918
  269,082,068
  269,082,250
  269,082,471
  269,084,351
  269,084,522
  269,084,610
  269,086,246
  269,086,614
  269,089,006
  269,089,811
  269,090,456
  269,090,800
  269,091,491
  269,091,974
  269,093,350
  269,094,869
  269,095,012
  269,095,269
  269,096,790
  269,096,883
  269,097,201
  269,097,386
  269,097,618
  269,097,621
  269,097,717
  269,097,737
  269,098,111
  269,098,909
  269,098,941
  269,099,072
  269,099,465
  269,099,472
  269,099,782
  269,099,862
  269,099,914
  269,099,935
  269,099,944
  269,099,974
  269,100,009
  269,100,015
  269,100,022
  269,100,050
  269,100,052
  269,100,053
  269,100,186
  269,100,239
  269,100,713
  269,100,730
  269,100,884
  269,100,910
  269,100,962
  269,102,091
  269,102,366
  269,102,531
  269,103,092
  269,103,131
  269,103,281
  269,103,296
  269,103,528
  269,103,627
  269,103,844
  269,103,958
  269,104,070
  269,104,210
  269,104,773
  269,104,778
  269,105,333
  269,105,717
  269,105,895
  269,107,355
  269,107,356
  269,107,364
  269,107,373
  269,107,629
  269,107,774
  269,108,242
  269,108,681
  269,108,969
  269,108,976
  269,109,275
  269,109,744
  269,109,928
  269,111,047
  269,111,605
  269,114,129
  269,114,274
  269,115,780
  269,116,613
  269,116,933
3
A
C
T
C
C
T
-
A
G
C
A
C
A
5
G
G
C
C
A
2
T
A
C
G
A
T
A
A
G
2
T
T
G
C
A
T
C
T
T
T
G
-
2
A
2
-
T
A
C
A
G
A
T
C
G
T
G
A
G
A
G
2
T
-
C
T
T
T
G
A
C
G
T
G
A
G
T
T
A
G
A
C
T
G
T
A
A/-
T
T
2
T
-
T
-
G
A
C
A
G
C
2
G
C
3
G
C
T
C
T
T
C
T
A
A
-
T
A
G
G/A
C
A
4
G
T
-
A
T
C
-
C
-
A
G
3
2
G
A
C
A
A
A
A
G
C
C
C
G
G
C
T
A
-
C
T
-
A
C
A
A
T
C
G
G
G
2
A
G
-
G
T
A
C
C
A
C
T
A
G
G
A
G
G
C
A
C
T
A
G
T
T
G
G
A
C
G
-
G
-
T
C
A
A
G
C
A
A
G
A
A
2
C
C
2
C
G
C
G
T
G
C
-
C
C
G/A
G/T
G/A
G/T
C
C
-
A
T
T
-
G
2
C
A
G
G
G
A
-
T
A
T
A
G
T
T
A
G
G
C
-
-
T
T
3
A
10
T
A
T
T
G
G
2
T
C
G
T
A
G
T
T
C
-
-
C
A
G
G
A
G
A
2
A
T
2
2
2
G
A
A
T
G
G
-
-
-
C
T
T
A
G
A
A
T
C
A
A
G
T
G
C
-
A
G
T
C
-
T
A
-
-
T
C
T
G
G
G
T
T
G
T
T
A
C
A
A
A
G
G
2
A
C
C
G
G
G
2
A
T
-
A
A
C
G
A
2