Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 128,154 (bp)   Positions: 77
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NRrrc (SOLiD) (KNAW) 
.01
.013
.006
.003
.066
.034
.251
.004
.0
.026
.522
.013
.004
1.0
.239
.089
.317
.078
.009
.363
.079
.004
.297
.1
.343
--
.339
.048
.132
.047
.022
.001
.011
--
.095
.026
.107
.739
.183
.01
.047
.158
.358
.013
.027
.207
--
--
--
.215
.295
.006
.097
.048
.004
.0
.026
.001
.413
--
.126
.005
.439
.004
.002
.02
.33
.161
.08
.101
.154
.001
.089
.319
.003
.002
.071
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Copg2
Copg2
Copg2
Copg2
Copg2
Copg2
Copg2
Copg2
G
C
7
31
C
A
G
C
A
T
G
C
3
G
T
A
C
C
T
6
C
A
A
C
T
T
T
G
C
C
T
A
G
G
C
A
T
A
C
A
3
T
C
C
G
C
T
T
C
C
T
T
C
T
A
G
C
C
T
6
T
C
G
A
A
G
A
A
C
A
G
G
A
T
T
T
T
  57,824,396
  57,825,788
  57,843,759
  57,843,767
  57,849,888
  57,849,932
  57,850,187
  57,852,398
  57,854,493
  57,854,665
  57,855,314
  57,856,119
  57,858,623
  57,860,041
  57,860,228
  57,860,698
  57,863,313
  57,863,422
  57,866,637
  57,866,894
  57,868,215
  57,868,835
  57,871,333
  57,872,479
  57,872,559
  57,873,437
  57,877,395
  57,879,169
  57,880,259
  57,880,439
  57,880,992
  57,881,243
  57,881,282
  57,882,404
  57,883,114
  57,884,319
  57,884,432
  57,884,588
  57,885,135
  57,886,407
  57,886,422
  57,888,252
  57,888,688
  57,889,045
  57,890,526
  57,891,614
  57,895,842
  57,896,180
  57,896,515
  57,899,305
  57,899,517
  57,899,666
  57,899,687
  57,900,835
  57,901,046
  57,902,863
  57,903,567
  57,904,602
  57,906,271
  57,907,925
  57,913,691
  57,913,965
  57,914,090
  57,914,360
  57,914,364
  57,914,615
  57,936,707
  57,936,883
  57,937,828
  57,938,460
  57,938,780
  57,939,645
  57,944,941
  57,946,569
  57,949,567
  57,949,814
  57,949,853
A
18
7/-
31/-
3
A/-
A
T
G
-
A
T
-
G/3
T/A
G
A
T
C
6/-
G
T
-
T
C
C
G
T
T
T
T/C
G
A
-
3
G
C
4
T
G
-
C
T
T
2
G
G
T/C
T
T
C
A
A
C
G
T
A
A
G
-
A
A
T
G
G
G/C
A/G
A/G
T
G
A
T
A/-
C
C
-
C