Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 73,708 (bp)   Positions: 201
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SHR/OlaIpcvPrin (KNAW) 
.023
.003
.038
.018
.006
.493
.013
.555
.111
.003
--
.027
--
--
--
--
--
.054
.318
.004
.797
.22
.998
.001
.011
.003
.001
.006
.007
.007
.008
.007
.019
.019
.023
.157
.002
.012
.0
.0
.071
.002
.004
.01
.004
.003
.01
.002
.008
.008
.005
.005
.007
.013
--
--
.197
.0
.001
.127
--
--
.253
.001
.012
.99
.009
.002
.046
.0
.002
.002
.186
.051
.177
.194
.327
.001
.061
.006
.003
.05
.015
.047
.05
.019
.012
.635
.701
--
--
--
--
--
--
--
--
--
--
.0
.052
.048
.037
.008
.008
.002
.096
.005
.001
.003
.017
.023
.0
.035
.014
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.004
.0
.001
.004
.009
.004
.966
.97
.962
--
.004
.0
.014
.001
.0
.006
.016
.031
.285
.121
.109
.0
--
--
.027
.011
.0
.074
.0
.0
.0
.003
.018
.004
.007
.002
.001
.001
.008
.0
.0
.0
.001
.0
.007
.019
.0
--
--
.113
.004
.001
.905
.173
.039
--
--
.486
.001
.0
.999
.046
--
.003
.003
.159
.002
.204
.192
.761
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
Cers3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
C
A
G
C
A
G
T
8
T
T
A
C
A
C
8
T
T
A
A
A
29
G
T
A
G
T
G
A
T
G
C
G
T
G
G
T
A
A
A
C
A
A
G
C
C
G
T
G
T
C
C
G
A
C
T
A
T
C
20
G
C
G
C
C
G
T
T
G
G
A
T
G
T
C
G
G
T
T
C
T
T
C
C
A
C
T
G
T
G
A
T
T
A
10
A
A
A
T
3
A
T
T
C
C
C
T
A
T
T
A
2
T
T
T
G
G
T
T
T
T
T
C
A
A
C
A
C
A
C
C
A
A
T
C
T
C
A
A
T
T
T
C
5
C
12
G
C
G
A
A
C
T
C
G
A
G
A
C
G
C
4
T
A
C
C
T
T
C
T
A
C
C
G
A
A
T
C
C
A
G
A
10
C
22
C
C
A
C
G
G
C
G
T
A
4
C
A
T
G
  128,783,000
  128,783,555
  128,784,739
  128,784,984
  128,785,673
  128,785,736
  128,785,908
  128,786,013
  128,786,255
  128,786,350
  128,786,725
  128,786,814
  128,787,945
  128,787,955
  128,787,966
  128,787,987
  128,788,244
  128,788,634
  128,789,047
  128,789,142
  128,789,675
  128,790,269
  128,791,627
  128,791,868
  128,792,273
  128,792,593
  128,792,702
  128,792,713
  128,792,723
  128,792,726
  128,792,733
  128,792,736
  128,792,739
  128,792,752
  128,792,753
  128,792,764
  128,792,827
  128,793,090
  128,793,121
  128,793,144
  128,793,908
  128,794,013
  128,794,264
  128,794,283
  128,794,311
  128,794,627
  128,794,630
  128,794,830
  128,794,862
  128,794,929
  128,794,943
  128,795,253
  128,795,254
  128,795,517
  128,796,362
  128,796,379
  128,796,459
  128,796,559
  128,796,989
  128,797,206
  128,804,388
  128,804,417
  128,805,897
  128,806,127
  128,806,780
  128,806,959
  128,807,016
  128,807,236
  128,807,239
  128,807,314
  128,807,525
  128,807,834
  128,808,151
  128,808,621
  128,809,016
  128,809,045
  128,809,118
  128,809,648
  128,809,823
  128,810,247
  128,810,251
  128,810,273
  128,810,283
  128,810,322
  128,810,323
  128,810,336
  128,810,355
  128,810,382
  128,810,394
  128,811,553
  128,811,652
  128,812,078
  128,812,080
  128,812,089
  128,812,176
  128,812,214
  128,812,241
  128,812,285
  128,812,655
  128,812,863
  128,812,893
  128,812,896
  128,813,243
  128,813,312
  128,813,359
  128,813,554
  128,813,636
  128,814,022
  128,814,598
  128,814,689
  128,814,746
  128,814,754
  128,814,809
  128,814,870
  128,814,984
  128,815,693
  128,815,697
  128,815,810
  128,815,832
  128,816,096
  128,816,112
  128,816,116
  128,816,243
  128,816,697
  128,816,942
  128,817,226
  128,817,326
  128,817,472
  128,817,493
  128,817,954
  128,817,955
  128,818,555
  128,818,606
  128,818,614
  128,818,636
  128,818,989
  128,819,273
  128,819,393
  128,819,400
  128,819,402
  128,819,417
  128,820,029
  128,820,113
  128,820,735
  128,820,757
  128,820,762
  128,821,669
  128,823,030
  128,823,181
  128,823,912
  128,823,922
  128,823,925
  128,824,043
  128,825,326
  128,825,525
  128,825,887
  128,826,110
  128,826,127
  128,826,697
  128,827,067
  128,827,117
  128,829,714
  128,829,890
  128,832,389
  128,832,862
  128,833,186
  128,833,245
  128,833,253
  128,833,260
  128,833,266
  128,833,273
  128,833,274
  128,833,398
  128,833,418
  128,833,421
  128,833,520
  128,833,568
  128,833,654
  128,834,392
  128,834,645
  128,836,027
  128,836,843
  128,836,995
  128,838,484
  128,838,680
  128,839,467
  128,841,489
  128,841,492
  128,842,089
  128,843,620
  128,845,600
  128,845,916
  128,846,481
  128,846,899
  128,849,366
  128,850,362
  128,850,412
  128,853,849
  128,853,948
  128,854,417
  128,855,875
T
G
A
G
A
A
-
A
C
-
A
C
G
T
G
G
-
C
C
C
4
T
-
4
2
G
-
C
C
-
C
A
-
A
G
-
-
C
G
G
C
T
-
G
A
T
T
T
C
A
G
-
A
T
G
T
C
7
C
3
-
2
A
A
A
T
2
-
C
T
A
7
A
A
C
T
C
A
8
C
2
A
C
T
G
T
3
G
T
3
A
T
A
C
A/G
-
G
G
G
C
-
T
C
C
A
T
T
C
G
G
G
C
-
G
A
2
C
A
C
C
C
C
C
T
G
G
T
G
T
2
4
T
T
C
A
3
C
3
C
C
2
C
2
T
-
3
-
A
T
C
G
G
T
C
T
T
2
A
2
T
A
T
-
C
G
-
-
2
-
T
A
T
2
-
A
G
T
C
T
T
A/3
A
3
-
T
22/-
2
4
G
G
A
A
T
54
C
5
-
A
5
11
A