Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 15,745 (bp)   Positions: 70
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SBN/Ygl (KNAW) 
.0
.013
.311
.027
.014
.06
.062
.262
.083
.028
--
--
.004
.04
.002
.011
.041
.064
.023
.05
.506
.032
.106
.159
.106
.016
.002
--
--
--
--
--
.01
.072
.562
.347
.006
.0
.336
.009
.001
.0
.002
.788
.797
.002
.016
.015
.017
.027
.13
.133
.003
.311
.0
--
.024
.012
.112
.027
.006
.005
.001
.003
.172
.0
.0
.0
.001
.001
Ccl4
Ccl4
Ccl4
Ccl4
Ccl4
Ccl4
Ccl4
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
T
C
C
C
G
G
T
C
T
T
T
5
A
6
G
G
C
A
A
C
C
T
G
C
16
28
A
C
C
C
A
G
T
C
C
T
C
T
A
A
C
A
A
4
C
T
G
T
8
2
A
G
T
T
T
G
C
A
G
T
G
C
A
T
A
A
A
G
A
  70,502,921
  70,503,651
  70,503,996
  70,504,032
  70,504,038
  70,504,166
  70,504,268
  70,504,378
  70,505,065
  70,505,071
  70,505,332
  70,505,387
  70,505,435
  70,505,803
  70,506,089
  70,506,843
  70,507,198
  70,507,220
  70,508,084
  70,508,217
  70,508,366
  70,508,425
  70,508,463
  70,508,472
  70,508,663
  70,508,707
  70,508,728
  70,508,889
  70,508,919
  70,508,932
  70,508,942
  70,508,943
  70,509,049
  70,509,220
  70,509,348
  70,509,373
  70,509,435
  70,509,468
  70,509,514
  70,509,599
  70,509,642
  70,509,793
  70,510,136
  70,510,843
  70,510,844
  70,510,931
  70,511,629
  70,511,647
  70,511,650
  70,511,674
  70,511,801
  70,511,802
  70,511,862
  70,511,917
  70,511,973
  70,512,288
  70,512,517
  70,512,636
  70,512,733
  70,513,293
  70,513,456
  70,513,457
  70,513,944
  70,516,055
  70,516,776
  70,517,054
  70,517,556
  70,517,558
  70,517,704
  70,517,953
T
A
11
T
T
T
A
-
T
C
26
6
-
G
6/-
A
2
T
G
G
T
T
C
A
-
-
28/-
T
G
T
T
G
A
C
T
A
C
T
C
T
G
T
G
A/5
4/-
T
C
A
A
-
2/-
-
A
C
C
C
A
T
-
T
C
A
T
G
C
G
-
G
T
G