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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 335,377 (bp)   Positions: 585
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.923
.019
.708
.017
.129
.126
.118
.003
.714
.466
.0
.826
.473
.007
.002
.018
.013
.28
.559
.044
.1
.11
.007
.129
.053
--
--
.691
.033
.068
.967
.942
.006
.001
.004
.001
.0
.002
.009
.0
.009
.003
.005
.019
.049
.028
.009
.001
.001
.006
.001
.001
.002
.002
.005
.002
.008
.005
.002
.0
.002
.002
.006
.001
.003
.001
.003
.001
.001
.001
.004
.067
.01
.001
.025
.016
.001
.972
.004
.003
.0
.0
.003
.005
.0
.006
.003
.0
.0
.012
.001
.174
.023
.078
.002
.0
.981
.041
.002
.002
.002
.337
.005
.008
.121
.007
.185
.031
.088
.001
.195
.146
.173
.056
.005
.004
.0
.0
.044
.308
.002
.009
.0
.018
.996
.017
.0
.974
.98
.004
.099
.002
.013
.015
.013
.03
.998
.003
.004
.0
.001
.87
.0
--
--
--
--
--
.061
.049
.017
.021
--
--
--
--
--
--
--
--
--
.005
.002
.108
.05
.781
.017
.164
.0
.052
.125
.004
.001
.929
.02
.079
.348
.001
.0
.004
.792
.859
.061
.32
.089
.012
.022
.056
.001
.737
.993
.987
.01
.0
.003
.0
.001
.79
.0
.0
.002
.028
.684
.001
.02
.002
.0
.025
.001
.001
.001
.043
.021
.997
.674
.318
.725
.022
.001
.0
.0
.234
1.0
.866
.759
.061
.003
.29
.0
.001
.038
.0
.0
.218
--
.003
.003
.0
.163
.166
.002
.087
.005
.085
.001
.004
.008
.037
.023
.001
.009
.035
.0
.064
.994
.997
.608
.283
.669
.647
.088
.0
.0
.006
.001
.005
.002
.824
.008
.119
.002
.344
.011
.01
.001
.064
.002
.037
.031
.004
.055
.0
.002
.0
.049
.0
.0
.0
.007
.001
.001
.023
.995
.0
.952
.0
.027
.015
.145
.001
.0
.008
.001
.002
.0
.398
.03
1.0
.032
.005
.002
.082
.001
.396
.007
.003
.0
.0
.038
.004
.002
.0
.0
.737
.0
.001
.042
.024
.718
.001
.0
.926
.0
.002
.137
.027
.377
.652
.009
.066
.001
.006
.0
.012
.005
.02
.019
.0
.002
.007
.0
.786
.843
.0
.01
.0
.002
.0
.0
.352
.008
.277
.058
.995
.909
.222
.969
.003
.992
.019
.01
.176
.0
.058
.07
.002
.002
.002
.008
.001
.993
.037
1.0
.092
.0
.056
.053
.018
.137
.001
.0
.026
.0
.055
.0
.021
.038
.181
.028
.015
.004
.001
.0
.0
.0
.033
.036
.019
.0
.006
.047
.982
.003
.064
.007
.002
.053
.058
.069
.997
.715
.946
.717
.001
.001
.001
.0
.008
.049
.006
.224
.039
.115
.06
.012
.001
.004
.038
.045
.044
.018
.005
.001
.428
.012
.004
.0
.026
.001
.086
.297
.013
.011
.001
.001
.001
--
--
--
--
--
.356
.465
.932
.83
.949
.688
.139
.001
.999
.861
1.0
.128
.023
.002
.038
.013
.102
.498
.378
1.0
.294
.998
.0
.036
.994
1.0
.945
.0
.002
.001
.002
.579
.119
.211
.0
.002
.001
.0
.002
.016
.001
.074
.0
.242
.226
.202
.97
.001
.001
.006
1.0
.011
.0
.795
.065
.001
.002
.029
.112
.017
.125
.128
.001
.316
.021
.0
.001
1.0
.0
.002
.001
.01
.004
.899
.0
.001
.001
.029
.002
.084
.736
.998
1.0
1.0
.997
.0
.985
.642
.437
.996
.0
.0
.074
1.0
.646
.878
.0
.0
.0
.0
.001
.014
.001
.024
.0
.005
.01
.288
.225
.973
.0
.002
.042
.143
.663
.108
.582
.491
.48
.959
.977
.001
.844
.004
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
--
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LOC102550632
LOC102550632
LOC102550632
LOC102550632
LOC102550632
LOC102550632
--
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--
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--
--
A
C
T
A
C
A
T
A
T
G
T
T
3
A
T
T
T
A
C
T
A
T
C
T
G
2
C
C
T
8
C
2
A
A
A
A
C
A
C
G
C
C
G
G
C
G
G
G
A
T
T
T
G
G
C
C
T
T
T
G
A
A
T
G
T
G
A
C
C
C
C
G
A
A
A
9
G
G
C
T
C
C
C
T
T
2
G
2
A
G
T
C
C
T
T
A
G
C
3
2
G
C
C
C
T
G
C
C
T
T
A
A
2
G
G
C
C
A
8
T
A
A
C
T
T
C
G
G
C
A
T
T
2
C
A
T
T
C
4
G
G
A
C
T
2
2
4
4
3
2
T
A
C
C
2
6
2
A
G
A
A
C
C
T
T
T
A
A
C
3
A
T
T
T
G
T
G
4
2
C
T
T
G
A
C
T
4
T
G
C
G
A
A
C
G
T
T
28
G
2
C
C
G
G
T
A
T
C
G
T
T
4
G
T
G
T
A
A
G
G
C
A
G
T
A
G
A
C
C
G
T
C
3
T
T
T
T
C
G
G
G
C
A
C
C
G
G
G
T
G
G
T
T
G
A
A
G
C
A
G
C
G
A
T
T
T
G
T
G
T
A
G
C
T
A
T
A
C
A
C
A
C
A
A
G
C
C
T
G
T
A
T
G
A
G
C
C
A
A
G
T
G
T
T
C
G
A
G
A
A
C
G
G
G
G
G
T
A
G
A
14
G
C
A
G
T
C
G
T
T
T
T
G
C
G
C
G
T
A
A
T
A
8
G
C
T
T
C
G
A
A
A
G
C
T
C
T
G
G
G
T
A
A
A
C
A
A
C
A
G
A
2
G
T
C
T
G
C
A
T
A
G
A
C
T
T
A
A
T
C
A
T
A
G
G
T
A
G
2
T
C
2
C
A
G
C
A
C
G
G
A
A
C
C
T
T
T
G
T
G
G
3
G
C
T
C
A
G
C
T
A
G
G
T
C
C
T
T
C
T
T
T
2
4
G
G
A
C
C
T
T
A
10
C
C
C
G
C
G
A
T
G
C
C
C
C
A
C
3
T
G
G
G
G
T
G
C
8
T
3
A
T
T
T
T
T
A
T
A
T
T
G
C
A
G
G
C
C
G
A
C
G
T
C
A
G
A
C
T
T
A
G
G
T
A
G
T
G
T
G
G
A
T
C
T
G
C
A
G
G
A
C
8
G
A
A
T
C
A
T
A
A
A
G
T
4
T
T
C
C
T
G
T
G
3
C
C
A
A
G
4
G
G
A
T
T
G
G
G
G
C
T
A
T
T
G
C
G
C
G
T
G
G
A
G
  50,461,595
  50,462,146
  50,462,414
  50,463,363
  50,463,393
  50,463,398
  50,463,401
  50,464,619
  50,465,242
  50,467,478
  50,469,887
  50,470,923
  50,471,250
  50,471,334
  50,472,136
  50,473,538
  50,478,521
  50,478,874
  50,480,999
  50,484,606
  50,485,031
  50,487,088
  50,487,119
  50,487,322
  50,487,338
  50,487,439
  50,487,512
  50,487,864
  50,496,874
  50,497,421
  50,498,063
  50,498,715
  50,500,746
  50,503,687
  50,503,699
  50,503,706
  50,503,719
  50,503,723
  50,503,727
  50,503,731
  50,504,387
  50,504,394
  50,504,397
  50,504,405
  50,504,411
  50,504,420
  50,504,422
  50,504,426
  50,504,430
  50,504,437
  50,504,446
  50,504,447
  50,504,451
  50,504,456
  50,504,461
  50,504,465
  50,504,473
  50,504,477
  50,504,482
  50,504,487
  50,504,491
  50,504,493
  50,504,500
  50,504,508
  50,504,515
  50,504,521
  50,504,538
  50,509,514
  50,509,518
  50,509,522
  50,509,526
  50,510,603
  50,510,663
  50,510,779
  50,511,757
  50,511,762
  50,511,794
  50,512,052
  50,512,371
  50,512,376
  50,512,470
  50,512,475
  50,512,481
  50,512,487
  50,512,494
  50,512,510
  50,512,520
  50,512,521
  50,512,523
  50,512,633
  50,513,522
  50,513,584
  50,514,389
  50,514,413
  50,514,963
  50,515,320
  50,515,379
  50,517,677
  50,518,255
  50,518,256
  50,520,613
  50,522,599
  50,523,137
  50,523,399
  50,523,584
  50,524,777
  50,525,042
  50,526,172
  50,526,178
  50,526,553
  50,526,683
  50,526,685
  50,526,711
  50,526,748
  50,529,145
  50,529,445
  50,530,227
  50,530,591
  50,531,154
  50,532,666
  50,535,087
  50,535,243
  50,535,419
  50,536,125
  50,536,741
  50,539,260
  50,541,041
  50,541,895
  50,543,415
  50,544,656
  50,547,511
  50,550,301
  50,550,465
  50,550,511
  50,550,516
  50,551,413
  50,551,586
  50,552,320
  50,552,460
  50,552,471
  50,552,475
  50,553,321
  50,556,555
  50,556,997
  50,556,998
  50,557,154
  50,557,158
  50,557,350
  50,558,637
  50,558,642
  50,558,648
  50,559,034
  50,561,599
  50,561,601
  50,561,609
  50,561,627
  50,561,631
  50,561,666
  50,561,676
  50,561,686
  50,561,696
  50,562,765
  50,562,767
  50,562,886
  50,563,001
  50,564,749
  50,565,383
  50,567,688
  50,568,213
  50,569,964
  50,570,008
  50,570,396
  50,570,526
  50,571,208
  50,572,347
  50,572,542
  50,573,678
  50,573,784
  50,573,786
  50,574,325
  50,578,258
  50,578,284
  50,578,806
  50,579,198
  50,579,572
  50,579,663
  50,580,299
  50,580,854
  50,581,872
  50,582,095
  50,582,132
  50,583,630
  50,584,934
  50,587,079
  50,587,914
  50,589,570
  50,589,696
  50,590,176
  50,590,389
  50,590,393
  50,591,197
  50,591,744
  50,593,775
  50,594,386
  50,595,636
  50,595,693
  50,595,972
  50,597,356
  50,597,751
  50,597,880
  50,597,983
  50,597,989
  50,598,054
  50,598,364
  50,598,731
  50,598,921
  50,598,989
  50,599,024
  50,599,450
  50,599,857
  50,600,178
  50,600,366
  50,600,692
  50,600,752
  50,600,758
  50,601,058
  50,602,709
  50,602,726
  50,602,781
  50,603,048
  50,603,325
  50,603,745
  50,604,011
  50,604,542
  50,604,621
  50,605,367
  50,605,369
  50,605,966
  50,606,271
  50,606,289
  50,606,519
  50,608,129
  50,608,765
  50,609,283
  50,609,328
  50,609,344
  50,609,345
  50,609,388
  50,609,402
  50,609,408
  50,609,414
  50,612,326
  50,612,978
  50,613,192
  50,614,559
  50,615,399
  50,621,057
  50,621,312
  50,621,344
  50,622,224
  50,622,373
  50,623,357
  50,625,200
  50,625,395
  50,625,556
  50,625,899
  50,626,176
  50,626,782
  50,627,226
  50,627,495
  50,627,875
  50,628,105
  50,628,927
  50,629,217
  50,630,555
  50,631,682
  50,631,960
  50,632,123
  50,632,765
  50,632,897
  50,633,006
  50,633,198
  50,633,307
  50,633,498
  50,633,717
  50,634,252
  50,635,564
  50,635,899
  50,635,956
  50,636,460
  50,636,609
  50,637,024
  50,637,125
  50,637,187
  50,638,137
  50,639,371
  50,639,398
  50,640,276
  50,640,513
  50,640,968
  50,643,182
  50,643,319
  50,644,892
  50,644,893
  50,644,898
  50,645,746
  50,646,153
  50,646,277
  50,646,551
  50,647,381
  50,648,217
  50,650,936
  50,651,228
  50,651,486
  50,651,561
  50,651,597
  50,651,618
  50,651,628
  50,651,678
  50,651,941
  50,652,276
  50,652,602
  50,652,604
  50,653,772
  50,654,523
  50,654,540
  50,654,789
  50,654,826
  50,655,178
  50,655,265
  50,655,680
  50,655,749
  50,655,929
  50,655,961
  50,656,455
  50,656,784
  50,657,503
  50,657,515
  50,657,544
  50,657,550
  50,657,555
  50,657,622
  50,657,705
  50,657,836
  50,658,029
  50,658,186
  50,658,222
  50,658,248
  50,658,297
  50,658,322
  50,658,460
  50,658,804
  50,658,994
  50,659,351
  50,659,376
  50,659,991
  50,660,193
  50,660,223
  50,660,335
  50,660,504
  50,660,555
  50,660,969
  50,661,068
  50,661,671
  50,661,806
  50,662,596
  50,663,584
  50,663,840
  50,664,048
  50,664,615
  50,664,627
  50,664,650
  50,665,665
  50,665,670
  50,665,756
  50,666,359
  50,666,606
  50,666,608
  50,667,451
  50,667,675
  50,668,121
  50,668,474
  50,668,813
  50,669,211
  50,669,332
  50,670,776
  50,672,146
  50,673,005
  50,675,938
  50,676,148
  50,677,378
  50,678,734
  50,678,772
  50,678,789
  50,680,337
  50,680,655
  50,680,673
  50,680,793
  50,681,273
  50,681,302
  50,681,305
  50,681,348
  50,681,820
  50,681,849
  50,682,266
  50,682,355
  50,682,712
  50,682,981
  50,683,420
  50,683,582
  50,683,692
  50,683,928
  50,684,498
  50,684,606
  50,684,748
  50,684,752
  50,684,760
  50,684,762
  50,684,770
  50,685,136
  50,685,255
  50,685,391
  50,685,997
  50,686,081
  50,686,152
  50,686,191
  50,686,270
  50,686,279
  50,686,298
  50,686,353
  50,686,460
  50,686,533
  50,686,993
  50,687,000
  50,687,713
  50,687,740
  50,687,748
  50,687,756
  50,687,762
  50,687,766
  50,687,776
  50,687,782
  50,687,797
  50,687,834
  50,688,010
  50,688,381
  50,688,405
  50,689,653
  50,689,684
  50,689,860
  50,690,014
  50,690,784
  50,690,907
  50,691,099
  50,691,100
  50,691,118
  50,691,128
  50,691,132
  50,691,165
  50,691,167
  50,691,182
  50,691,230
  50,691,232
  50,691,432
  50,691,468
  50,691,482
  50,693,267
  50,693,282
  50,693,520
  50,693,960
  50,694,233
  50,694,944
  50,695,104
  50,695,868
  50,695,955
  50,697,665
  50,705,909
  50,715,333
  50,719,739
  50,719,740
  50,720,061
  50,720,899
  50,720,951
  50,721,631
  50,722,514
  50,722,592
  50,723,949
  50,724,369
  50,724,490
  50,724,662
  50,725,203
  50,725,405
  50,725,415
  50,726,061
  50,726,116
  50,727,144
  50,728,273
  50,728,324
  50,728,355
  50,728,737
  50,728,824
  50,729,253
  50,729,683
  50,730,550
  50,731,053
  50,731,077
  50,731,089
  50,732,330
  50,732,941
  50,734,741
  50,737,413
  50,737,929
  50,740,868
  50,742,127
  50,742,259
  50,747,180
  50,747,789
  50,748,846
  50,749,739
  50,750,202
  50,751,654
  50,752,367
  50,755,654
  50,755,939
  50,756,993
  50,759,469
  50,759,499
  50,759,507
  50,760,425
  50,761,196
  50,761,225
  50,762,196
  50,764,091
  50,764,303
  50,766,901
  50,767,567
  50,767,620
  50,768,665
  50,771,000
  50,771,988
  50,772,852
  50,773,085
  50,773,643
  50,773,711
  50,773,832
  50,773,862
  50,774,832
  50,774,963
  50,775,213
  50,775,408
  50,775,446
  50,776,006
  50,776,357
  50,777,164
  50,777,520
  50,777,774
  50,778,196
  50,778,517
  50,779,142
  50,781,255
  50,781,310
  50,781,319
  50,781,388
  50,781,611
  50,781,903
  50,782,177
  50,782,641
  50,783,300
  50,784,134
  50,785,948
  50,785,965
  50,786,294
  50,786,342
  50,787,161
  50,788,139
  50,789,156
  50,789,271
  50,789,447
  50,789,593
  50,789,612
  50,790,663
  50,790,731
  50,792,011
  50,795,625
  50,796,118
G
G
C
9
C/T
G
C
G
G
A
G
G
-
C
C
T/-
C
2
6
A
3
4
-
G
G/-
2/-
C/2
T
T/2
-
T
-
-
C
G
G
T
T
-
2
2
A
T
T
-
C
-
C
-
-
G
C
-
-
-
-
-
-
-
-
C
-
-
-
-
T
-
C/T
T
T
T
A
T
G
G
-
A
A
T
C
-
T
-
-
A
-
-
-
A/-
2
C
T
T
C
C
G
A
2
3/-
-
A
T
T
T
2
T
T
3
C
3
T
A/T
2/-
A
G/2
T
T
G
-
C
T
-
T
C
3
T
A
A
T
C
10
C
-
-
2
-
C
CT/3
4/-
G/5
5
-
T
T/3
-
2/-
4/-
-
3/-
2/-
T/-
T
3
C/A
2/-
6/-
-
A/G
G/A
A/G
A/G
C/T
C/T
C
G
C
T
G
T
-
C
C
C
C
A
C
A
4/-
2/-
T
G
C
A
G
T
C
-
-
A
G
A
T
8/-
T
G/2
G
C
-
2
-
T
5
T
A
A
-
C
G
A
C
C
-
A
A
A
C
T
G
A
A
T
2
C
G
C
A
C
T
T
2
C
T
-
C
A
G
G
T
G/A
A
G/T
T
C
G
A
A
A
-
-
-
-
5
G
G/T
2
2
C
T
G
G/2
G
-
G
A
14
G
A
-
A
C
G
A
T
2
G
3
G
T
T
T
-
T
G
G
C
A
T
C
A
C
G
2
T
G
T
G
T
G
G
A
C
2
3
T/4
C/2
A
G
A
G
2
T
A
A
A
A
A
2
G
A
G
-
T
T
G
T
C
T
-
G
C
C
C
C
T
T
A
A
C
3
G
C
G
-
T
T
G
G
G
A
G
G
2
2
A
C
T
C
A
T
T
G
G
C
G
A
C
G
-
G
A
G
-
A
C
T
C
A
T
G
-
G
A
2
T
C
C
G
3
T/-
2
T
A
G
A
A
3
A/G
C
-
5
C/A
-
T
G
T
T
C
T
A
A
G
G
T
T
5
T/C
T/C
2
-/4
A
C
-
T
A
A
T
G
A
T
A
G
-
A
-
3
3
T/C
T/C
C/T
T/C
T/C
C
-
-
T
A
G
T
T
C
C
G
-
A
G
2
G/A
C/T
G/C
A/C
T/2
2
C/T
T
C/G
C/T
A/C
C/T
-
C
C
A
2
-
TA/A
G/A
2
-
T/2
3/-
G
A
G
G
C
C
G
C
C
C
C
6
C/T
T
4
A
A
A
A
G
T
T
C
G
C
3
A/G
A
C
C
G
A
A
2
G
2
C
A
-
2
A
G
C
T
-
A
A
G
A
5/13
A/5
T
8/-
-
C
A/3
C
T
C
A
G
-
G
A
G
-
C
-
T
2
-
A
G
2
-
T
A
T
G
G/C
4/-
G/C
2
G
C
A
A
A
A
2
2
C
-
-
C
2
-
-
2
2
2
C
C
-
2