Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 622,451 (bp)   Positions: 52
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
BUF/MNa (KyushuU) 
.902
.447
.735
.003
.002
.001
.0
.0
.003
1.0
.936
.988
.999
.998
.017
.982
.006
.001
.049
.009
.086
.037
.148
.004
.028
.006
.022
.0
.002
.316
.977
1.0
.396
.858
1.0
1.0
.996
.516
.994
.816
.001
.615
.72
.986
.0
.002
.881
.044
.998
.998
.879
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Cacna1c
Cacna1c
Cacna1c
Cacna1c
Cacna1c
Cacna1c
C
G
G
G
C
T
T
T
A
T
G
T
A
A
T
C
A
T
G
C
G
C
C
G
T
T
C
T
A
A
C
T
A
G
C
C
C
A
C
C
A
C
T
G
T
A
C
A
G
G
C
C
  216,564,782
  216,566,235
  216,568,650
  216,573,356
  216,586,675
  216,586,677
  216,587,947
  216,587,949
  216,598,168
  216,651,221
  216,654,150
  216,654,876
  216,664,289
  216,666,116
  216,669,359
  216,669,565
  216,681,705
  216,681,834
  216,691,204
  216,691,218
  216,704,194
  216,704,930
  216,704,947
  216,709,441
  216,710,692
  216,710,698
  216,716,450
  216,725,862
  216,746,673
  216,768,566
  216,807,039
  216,807,137
  216,807,165
  216,809,229
  216,809,655
  216,809,711
  216,810,583
  216,810,688
  216,811,308
  216,817,626
  216,880,381
  216,893,345
  216,905,514
  216,909,320
  216,909,387
  216,912,207
  216,966,134
  216,991,946
  216,992,038
  216,993,558
  217,122,972
  217,123,031
C/T
G/-
G/A
G/A
C/6
T/G
T/-
T/A
A/G
T/C
G/C
T/C
A/G
A/G
T/C
C/T
A/G
T/C
G/A
C/A
G/A
C/T
C/T
G/A
T/-
T/C
C/T
T/A
A/G
A/G
C/T
T/C
A/G
G/A
C/G
C/G
C/3
A/G
C/A
C/T
A/G
C/A
T/C
G/A
T/2
A/G
C/A
A/C
G/A
G/A
C/2
C/-