Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 44,346 (bp)   Positions: 83
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SR/JrHsd (KNAW) 
.204
.169
.008
.001
.058
.002
.004
.026
.051
.998
.0
.067
.0
.001
.031
.012
--
.348
.348
.009
--
.003
.008
.003
.127
.004
.001
.026
.0
.001
.005
.024
.0
.998
.075
.0
.112
.027
.003
.0
.1
.019
.007
.001
.0
.001
.046
.002
.032
.439
.104
.105
.539
.434
.004
.425
.009
.014
.0
.604
.868
.997
.0
.001
.001
.03
.066
.062
.002
.163
.083
.006
.929
.217
.0
.028
.001
.001
.007
.471
.097
.983
.003
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Bmp1
Bmp1
Bmp1
Bmp1
Bmp1
Bmp1
Bmp1
Bmp1
Bmp1
A
T
4
T
C
2
G
T
C
T
T
A
T
C
C
T
G
2
6
T
G
G
G
T
G
32
2
T
T
C
C
C
G
G
A
T
A
A
C
G
C
G
C
G
C
T
A
T
C
T
C
C
T
T
G
T
G
C
T
C
10
16
C
A
C
A
6
C
G
A
T
T
G
G
G
C
54
G
T
A
A
14
G
  55,890,469
  55,890,821
  55,890,852
  55,890,946
  55,891,123
  55,892,256
  55,892,397
  55,892,527
  55,892,538
  55,893,120
  55,893,348
  55,893,712
  55,894,120
  55,895,104
  55,895,935
  55,896,408
  55,897,004
  55,897,418
  55,897,420
  55,897,900
  55,898,041
  55,898,278
  55,898,632
  55,898,642
  55,898,656
  55,898,745
  55,898,799
  55,899,109
  55,899,428
  55,899,718
  55,900,443
  55,900,528
  55,900,888
  55,901,027
  55,901,978
  55,902,284
  55,903,565
  55,905,124
  55,906,088
  55,907,228
  55,907,540
  55,907,632
  55,907,723
  55,910,124
  55,914,163
  55,916,709
  55,916,727
  55,916,912
  55,918,229
  55,923,371
  55,923,489
  55,923,490
  55,923,561
  55,923,563
  55,923,593
  55,923,689
  55,924,242
  55,924,619
  55,925,882
  55,925,989
  55,926,379
  55,926,721
  55,927,373
  55,927,374
  55,927,670
  55,927,969
  55,928,007
  55,928,214
  55,928,450
  55,929,234
  55,929,235
  55,929,477
  55,929,788
  55,929,902
  55,930,454
  55,930,526
  55,931,713
  55,932,234
  55,933,065
  55,933,111
  55,933,478
  55,933,598
  55,933,662
G
3
-
G
T
-
A
C
T
C
C
4
C
T
3
-
A
2/-
6/-
A
11
A
A
C
A
-
-
A
-
A
G
T
C
A
G
9/17
2
G
T
A
T
A
13
-
T
G
C
G
T
C
A
G
12
29
2
19
A
T
C
T
-
16/-
A
G
25
C
-
G
T
C
C
14
T
4
A
T
-
A
T/5
A/16
T
-
C