Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 59,035 (bp)   Positions: 108
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/EurMcwi (MCW) 
.0
.01
.0
.018
.115
.006
.008
.011
.072
.245
.298
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.197
.004
.004
.075
.107
.033
.129
.017
.081
.012
.045
.015
.008
.031
.011
.001
.163
.101
.134
.055
.306
.133
.022
.22
.251
.263
.532
.072
.555
.058
.001
.001
.268
.241
.787
.126
.021
.044
.165
.163
.482
.008
.014
.074
.009
.365
.02
.024
.005
.001
.0
.002
1.0
.015
.025
.001
.0
.001
.013
.064
.014
.01
.007
.407
.0
.021
.003
.014
.015
.0
.0
.005
.029
--
--
.49
.514
.666
.713
.002
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
Bin1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
G
A
G
G
G
G
G
C
A
4
A
A
2
G
T
4
C
C
C
C
C
12
C
G
C
T
C
A
T
T
A
C
T
A
A
A
4
G
G
G
T
T
T
C
4
2
G
G
T
C
C
C
C
C
A
G
2
T
25
A
A
T
T
C
A
T
C
C
C
G
T
A
T
G
A
C
A
A
A
3
A
C
C
A
G
C
A
A
A
A
T
T
T
C
C
G
C
T
10
G
G
A
T
2
T
C
A
  24,879,323
  24,879,994
  24,880,747
  24,883,990
  24,887,663
  24,888,380
  24,888,384
  24,888,388
  24,888,459
  24,888,540
  24,888,541
  24,888,633
  24,888,767
  24,888,788
  24,888,837
  24,888,875
  24,888,906
  24,888,983
  24,888,984
  24,889,024
  24,889,028
  24,889,097
  24,889,158
  24,889,200
  24,889,203
  24,889,204
  24,889,256
  24,889,264
  24,891,091
  24,891,904
  24,891,905
  24,892,338
  24,893,751
  24,894,653
  24,895,019
  24,895,545
  24,896,951
  24,897,692
  24,898,967
  24,899,160
  24,899,195
  24,899,244
  24,899,247
  24,899,270
  24,900,530
  24,900,709
  24,900,711
  24,901,174
  24,901,196
  24,901,657
  24,902,250
  24,902,282
  24,902,291
  24,902,295
  24,902,435
  24,903,613
  24,904,287
  24,904,313
  24,904,403
  24,904,405
  24,904,886
  24,905,058
  24,905,196
  24,905,231
  24,905,312
  24,905,320
  24,905,424
  24,905,738
  24,906,319
  24,907,946
  24,908,743
  24,909,319
  24,910,778
  24,910,944
  24,911,137
  24,911,331
  24,911,955
  24,912,471
  24,912,547
  24,912,647
  24,915,324
  24,916,215
  24,918,562
  24,921,645
  24,921,703
  24,921,881
  24,921,963
  24,922,187
  24,922,322
  24,922,346
  24,922,653
  24,926,408
  24,926,492
  24,926,723
  24,928,260
  24,928,906
  24,929,044
  24,929,232
  24,930,025
  24,930,766
  24,932,160
  24,934,607
  24,934,617
  24,935,707
  24,935,708
  24,936,720
  24,937,246
  24,937,703
T
-
C
G/2
G/T
G/A
G/A
G/A
5/CT
A/-
4/-
A/5
9
2/-
9
T/-
4/-
C/G
C/T
C/T
C/T
5
12/-
C/T
G/C
C/T
T/C
T
G
C
C
2
T
C
G
G
G
-
A
C
A
A
A
G
T
4/-
-
A
A
A
2
C/A
A/5
C/A
2
-
A
-
T/-
25/-
-
-
C
C
A
G
C
2
T
T
A
C
G
2
A
G
T
C
C
G
-
2
A
T
T
A
3
C
-
T
G
T/3
C
C
-
T
A
G
G
-
5/3
G/A
A/G
T/3
2/-
C
T
C