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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 180,128 (bp)   Positions: 547
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NRrrc (SOLiD) (KNAW) 
.003
.002
.006
.008
.156
.161
.051
.053
.123
.293
.025
.373
.024
.009
.001
.001
.006
.0
.124
.008
.0
.005
.101
.006
--
.441
.076
.096
.809
.017
.02
.003
.187
.0
.002
.001
.001
.01
.011
.136
.182
.042
.011
.174
.79
.069
.099
.078
.39
.487
.045
.025
.045
.021
.027
.399
.21
.058
.056
.034
.006
.017
.009
.0
.044
.001
.584
.025
.001
.007
.002
.524
.167
.003
.02
.054
.034
.037
.001
.001
.004
.055
.002
.001
.002
.014
.022
.055
.186
--
.014
.07
.006
.223
.015
.087
.639
.024
.07
.082
.167
.472
.381
.063
.087
.085
.003
.008
.379
.053
.082
.05
.126
.058
.004
.013
.015
.196
.592
.219
.312
.001
.003
.1
.0
.078
.063
.067
.356
.005
.178
--
--
--
.016
.186
.073
.179
.007
.001
.0
.517
.635
.192
.001
.0
.03
.114
.015
.045
.373
.011
.009
.027
.004
.001
.002
.001
.013
.626
.048
.897
.081
.004
.273
.002
.04
.05
.354
.103
.001
.001
.037
.004
.002
.0
.08
.0
.0
.0
.098
.006
.014
.021
.003
.02
.029
.002
.001
.002
.018
.002
.003
.06
.324
.005
.003
.0
.007
.007
.0
.004
.037
.012
.002
.008
.001
.003
.002
.0
.115
.0
.001
.013
.0
.007
.061
.023
.005
.0
.001
.0
.002
.0
.0
.165
.019
.053
.078
.054
.002
.001
.002
.001
.0
.001
.0
.037
.379
.004
.013
.177
.307
.684
.008
.006
.053
.004
.264
--
--
--
.034
.014
.224
.248
.022
.022
.183
.968
.362
.373
.167
.086
.088
.008
--
--
--
--
.015
.012
.049
.001
.031
.014
.158
--
.042
.365
.756
.883
.023
.149
.015
.022
.02
.028
.024
.015
.176
.003
.018
.041
.39
.154
.0
.001
.0
.172
.0
.071
.002
.287
.041
.001
.013
.812
.849
.003
.004
.515
.003
.013
.012
.002
.003
.022
.0
.006
.001
.001
.002
.0
.001
.001
.002
.058
.067
.028
.0
.006
.046
.282
.002
.039
.011
.223
.017
.004
.006
.99
--
.002
--
.002
.004
.002
.01
.02
.019
.012
.297
.081
.087
.155
.052
.033
--
--
--
--
--
--
--
--
--
--
.02
.012
.05
1.0
.001
.001
.048
.475
.001
.03
.001
.005
.004
.003
.005
.272
.173
.007
.001
.0
.006
.003
.079
.049
.013
.347
.17
.304
.051
.046
.198
.002
.287
.0
.007
.005
.001
.006
.018
.247
.0
.0
.0
.0
.002
.0
.052
.023
.032
--
.191
.351
--
--
.0
.017
.023
.014
.0
.043
.0
.0
.0
.004
.005
.011
.004
.005
.111
.072
.039
.006
.004
.001
.008
.001
.001
.0
.0
.004
.002
.008
.005
.01
.258
.047
.161
.024
.016
--
.369
.004
.064
.003
.055
.014
.092
.067
.028
.0
.0
.0
.035
.0
.007
.0
.029
.007
.084
.047
.064
.001
.0
.001
.003
.011
.005
.001
.0
.001
.0
.457
.003
.008
.006
.001
.042
.067
.021
.04
.129
.072
.042
.018
.004
.365
.197
.077
.017
.02
.008
.016
.05
.025
.02
.187
.002
.0
.001
.067
.101
.015
.007
.012
.002
.026
.001
.0
.0
.001
.005
.052
.179
.001
.01
--
--
.008
.0
.625
.0
.0
.001
.0
.955
--
--
.003
.031
Apba2
Apba2
Apba2
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Apba2
Apba2
Apba2
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Apba2
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Apba2
Apba2
Apba2
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G
G
C
A
G
T
A
C
G
2
G
A
C
T
A
C
C
T
C
G
C
C
C
T
G
C
C
C
A
A
T
A
A
G
G
T
G
G
A
A
C
11
C
A
C
C
G
G
A
G
G
G
G
C
G
A
C
A
T
C
C
A
A
C
G
G
A
A
T
G
A
G
C
G
A
C
C
G
A
C
C
T
A
A
G
A
T
G
T
C
C
C
G
8
4
T
T
C
G
T
T
G
C
G
A
C
G
G
T
C
A
G
C
T
A
G
G
C
G
G
C
G
G
G
C
T
G
G
3
C
C
A
A
T
C
A
A
T
T
A
C
G
G
A
T
T
A
C
A
A
A
C
T
T
G
C
T
T
G
A
A
14
A
T
T
T
T
T
C
T
G
C
T
T
C
G
4
C
G
A
T
A
T
C
A
T
G
T
A
A
A
A
G
A
G
T
C
G
C
T
A
G
C
C
A
A
C
G
G
T
G
T
C
G
C
G
C
C
G
T
T
A
G
C
A
G
C
A
G
A
G
G
C
T
A
T
C
G
A
A
4
A
C
G
G
2
T
T
A
G
C
T
C
C
C
A
A
A
T
A
G
C
G
C
C
C
T
A
A
G
G
T
C
C
A
C
A
T
T
A
A
C
G
C
T
G
G
T
C
G
T
C
T
G
G
T
T
A
G
C
A
G
A
T
G
G
C
T
A
A
T
A
G
T
C
G
T
A
G
A
A
C
T
A
T
T
G
T
A
A
T
T
T
C
T
2
T
T
A
C
C
C
6
C
G
T
C
C
T
A
A
G
17
A
T
G
T
G
32
A
G
C
A
A
A
G
A
C
G
G
T
A
C
G
A
2
C
2
G
A
G
T
C
A
A
C
A
T
A
C
G
C
T
G
C
C
C
G
C
C
C
A
G
C
A
A
T
A
C
A
C
T
C
C
G
T
G
A
A
G
A
C
C
G
G
A
G
C
A
T
A
A
A
A
G
C
C
T
C
C
A
T
T
G
G
A
C
3
G
C
C
G
T
G
C
C
A
14
18
C
T
A
C
C
C
C
T
G
G
T
C
A
G
T
T
T
C
T
3
C
T
C
A
G
A
C
G
T
G
C
C
C
A
T
C
G
G
8
A
T
T
C
T
G
G
C
A
G
C
T
A
T
A
A
T
A
G
C
A
T
G
G
T
T
G
A
C
A
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G
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T
T
6
G
  126,475,752
  126,475,916
  126,475,924
  126,476,223
  126,477,732
  126,478,031
  126,479,268
  126,479,269
  126,479,917
  126,480,429
  126,480,891
  126,480,935
  126,481,263
  126,481,566
  126,481,681
  126,481,724
  126,482,220
  126,482,823
  126,483,306
  126,484,421
  126,484,580
  126,484,789
  126,484,983
  126,485,455
  126,485,857
  126,486,780
  126,487,369
  126,487,375
  126,487,753
  126,488,087
  126,489,049
  126,489,140
  126,489,210
  126,489,433
  126,489,993
  126,490,129
  126,490,141
  126,490,373
  126,490,566
  126,490,855
  126,492,827
  126,492,916
  126,493,087
  126,493,368
  126,493,406
  126,493,472
  126,494,654
  126,494,675
  126,496,773
  126,497,105
  126,497,901
  126,499,329
  126,499,372
  126,500,230
  126,500,432
  126,502,836
  126,503,153
  126,503,844
  126,503,845
  126,503,858
  126,503,874
  126,503,997
  126,504,885
  126,504,896
  126,505,405
  126,506,193
  126,506,309
  126,506,496
  126,506,608
  126,506,680
  126,506,723
  126,506,901
  126,507,628
  126,507,727
  126,507,754
  126,507,763
  126,507,775
  126,507,780
  126,507,863
  126,507,864
  126,507,914
  126,507,930
  126,508,248
  126,508,586
  126,508,624
  126,509,173
  126,509,260
  126,509,308
  126,509,737
  126,510,115
  126,511,099
  126,511,229
  126,511,527
  126,511,705
  126,511,958
  126,511,965
  126,512,323
  126,512,458
  126,512,485
  126,512,486
  126,512,541
  126,512,893
  126,512,977
  126,513,082
  126,513,147
  126,513,468
  126,513,604
  126,513,772
  126,513,900
  126,513,983
  126,514,015
  126,514,075
  126,514,282
  126,514,324
  126,514,788
  126,515,222
  126,515,223
  126,515,318
  126,515,349
  126,515,436
  126,515,455
  126,515,797
  126,515,873
  126,516,153
  126,516,323
  126,516,358
  126,516,366
  126,516,450
  126,516,645
  126,517,250
  126,517,517
  126,518,294
  126,518,295
  126,518,296
  126,518,971
  126,519,470
  126,519,588
  126,519,993
  126,520,198
  126,520,369
  126,520,642
  126,520,744
  126,520,840
  126,520,929
  126,521,127
  126,521,225
  126,521,286
  126,521,460
  126,521,475
  126,521,608
  126,521,693
  126,525,961
  126,526,120
  126,526,521
  126,526,738
  126,526,811
  126,527,339
  126,527,668
  126,528,988
  126,529,174
  126,530,266
  126,531,282
  126,531,713
  126,531,821
  126,532,157
  126,532,590
  126,532,820
  126,533,157
  126,533,386
  126,533,471
  126,534,055
  126,534,306
  126,534,483
  126,534,561
  126,535,135
  126,535,234
  126,535,276
  126,535,291
  126,535,293
  126,535,341
  126,535,467
  126,535,607
  126,535,775
  126,535,920
  126,536,099
  126,537,043
  126,537,226
  126,537,736
  126,537,748
  126,537,762
  126,537,944
  126,538,039
  126,538,110
  126,539,116
  126,539,180
  126,539,281
  126,539,322
  126,539,343
  126,539,549
  126,539,645
  126,539,695
  126,539,703
  126,539,733
  126,539,838
  126,539,931
  126,540,252
  126,540,259
  126,540,907
  126,540,940
  126,541,043
  126,541,182
  126,541,273
  126,541,413
  126,541,502
  126,541,623
  126,541,918
  126,542,126
  126,542,335
  126,542,706
  126,542,825
  126,543,180
  126,543,361
  126,543,580
  126,544,872
  126,545,006
  126,545,778
  126,545,914
  126,545,945
  126,546,037
  126,546,063
  126,546,149
  126,546,155
  126,546,156
  126,546,235
  126,546,494
  126,546,522
  126,546,714
  126,546,823
  126,546,840
  126,547,061
  126,547,147
  126,547,400
  126,548,173
  126,548,328
  126,548,538
  126,548,546
  126,548,617
  126,549,089
  126,549,120
  126,549,328
  126,549,507
  126,549,570
  126,549,893
  126,550,088
  126,550,250
  126,550,263
  126,550,469
  126,550,546
  126,550,732
  126,551,204
  126,551,554
  126,551,650
  126,552,399
  126,552,414
  126,552,415
  126,552,466
  126,552,720
  126,552,794
  126,553,009
  126,553,621
  126,554,918
  126,554,923
  126,555,231
  126,555,473
  126,555,577
  126,555,600
  126,555,767
  126,555,907
  126,556,302
  126,556,376
  126,556,456
  126,556,646
  126,557,513
  126,558,118
  126,558,193
  126,558,237
  126,558,238
  126,558,720
  126,558,890
  126,559,748
  126,560,374
  126,560,810
  126,561,820
  126,562,654
  126,563,340
  126,563,765
  126,573,418
  126,573,422
  126,573,485
  126,573,816
  126,574,103
  126,574,213
  126,574,419
  126,574,558
  126,574,728
  126,575,009
  126,575,092
  126,575,181
  126,575,196
  126,575,413
  126,575,547
  126,576,061
  126,576,443
  126,576,748
  126,576,815
  126,577,699
  126,578,780
  126,578,823
  126,579,018
  126,579,050
  126,579,271
  126,579,432
  126,579,666
  126,579,685
  126,579,694
  126,579,958
  126,580,212
  126,580,318
  126,580,455
  126,581,007
  126,581,938
  126,582,353
  126,582,711
  126,584,455
  126,584,772
  126,584,897
  126,585,951
  126,586,210
  126,586,618
  126,588,774
  126,588,936
  126,589,642
  126,590,227
  126,591,014
  126,591,444
  126,592,858
  126,593,459
  126,593,703
  126,593,737
  126,593,866
  126,593,869
  126,593,931
  126,593,962
  126,594,307
  126,594,309
  126,594,340
  126,594,517
  126,594,606
  126,595,370
  126,595,428
  126,595,447
  126,595,879
  126,596,578
  126,596,595
  126,596,742
  126,596,848
  126,597,076
  126,597,330
  126,598,541
  126,598,873
  126,599,575
  126,599,904
  126,600,328
  126,600,532
  126,600,666
  126,600,711
  126,601,357
  126,601,920
  126,602,324
  126,603,734
  126,603,738
  126,603,742
  126,603,748
  126,604,397
  126,604,488
  126,604,605
  126,604,694
  126,604,702
  126,604,711
  126,604,763
  126,605,243
  126,605,283
  126,605,296
  126,605,437
  126,605,554
  126,605,560
  126,605,739
  126,606,298
  126,606,859
  126,608,174
  126,608,207
  126,608,382
  126,608,816
  126,609,564
  126,609,718
  126,609,986
  126,610,597
  126,610,744
  126,611,412
  126,611,413
  126,611,920
  126,612,045
  126,612,197
  126,612,588
  126,614,404
  126,614,839
  126,615,001
  126,615,142
  126,615,663
  126,615,681
  126,616,518
  126,616,529
  126,617,069
  126,617,587
  126,617,790
  126,617,803
  126,618,472
  126,619,213
  126,619,330
  126,619,341
  126,619,546
  126,619,606
  126,620,005
  126,621,182
  126,621,466
  126,621,467
  126,621,484
  126,621,488
  126,621,491
  126,621,498
  126,622,588
  126,622,956
  126,623,484
  126,623,491
  126,623,548
  126,623,554
  126,623,618
  126,623,672
  126,623,805
  126,624,104
  126,624,441
  126,624,602
  126,624,737
  126,625,631
  126,626,549
  126,626,593
  126,626,660
  126,627,181
  126,627,221
  126,627,509
  126,627,979
  126,628,312
  126,628,522
  126,628,634
  126,628,873
  126,629,158
  126,629,331
  126,629,742
  126,629,908
  126,629,979
  126,630,364
  126,630,435
  126,630,541
  126,630,562
  126,630,607
  126,630,621
  126,630,890
  126,630,964
  126,631,237
  126,631,654
  126,631,851
  126,631,915
  126,631,916
  126,632,246
  126,632,364
  126,632,451
  126,632,480
  126,632,727
  126,633,625
  126,633,666
  126,633,708
  126,633,759
  126,633,870
  126,634,019
  126,634,162
  126,634,174
  126,634,490
  126,634,514
  126,634,642
  126,634,682
  126,634,692
  126,634,702
  126,634,722
  126,634,786
  126,634,887
  126,635,030
  126,635,221
  126,635,339
  126,635,500
  126,635,619
  126,635,761
  126,636,086
  126,636,232
  126,636,704
  126,637,060
  126,637,281
  126,638,134
  126,638,670
  126,638,683
  126,638,806
  126,639,017
  126,639,026
  126,639,216
  126,639,253
  126,639,280
  126,639,577
  126,639,610
  126,639,712
  126,640,707
  126,640,783
  126,640,792
  126,641,074
  126,641,103
  126,641,136
  126,641,247
  126,641,343
  126,641,778
  126,641,815
  126,641,972
  126,642,087
  126,642,384
  126,645,774
  126,646,497
  126,651,879
  126,651,880
  126,654,738
  126,655,770
A
A
T
G
A
C
5
A
A
-
A
C
T
C
G
T
T
C
T
T
T
T
G
A
A
4/CT
G
G
A/T
T
A
2
T
A
A
C
A
A
G
G
T
11/-
T
-
T
T
2
G/2
2
A
G/A
A
C
A
A
3
18
T
C
T
T
C
G
A
T
T
A/T
A/G
C
A
G
G/2
C/T
G/T
2
-
-
2
T
A
C/T
T/3
G
G
A
T
C
T
C
C/T
T
A
A
8/-
-
A
C
T
C
C
G
C
T
A
G
T
T
A
T/C
-
G
A
T
T/A
G
2
2
T
A
T
T
A
C
A
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C
A
T
3/-
T
C/T
A/G
A/G
T/G
-
G
G
C
2
17
T
A
A
-
G
C
G
C/T
G
C
2
T
C
C
A
T
C
C
A
A/-
2
-
-
C
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C
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C
G
C
A
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3
C
T
A
-
A
A
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C
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A/G
C
A
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A/G
G
A/G
G
C
4
A
G
T
A
T
C
G
A
C/T
G
T
C
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A
G/A
C
A
C
T
A
T
A
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2
C
-
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A
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A
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A/2
G/A
G
G/A
G/A
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2
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G/2
G
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-
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2/-
A
T/2
G
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G
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G
G
G
A
T
A
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A
T
A
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C
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C
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A
A
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A
A
C
C
C
A
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G
A
C
C
A
A
A
C
G
G
-
C
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A
C
A
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A
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3
T
T/C
G
8
C
A
G
G
G
C
C
C
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G
2/-
C
A
G
T
T
T
-
T
G/T
C
T
A
G
A/T
G
A
-
C
C
A
C
C
-
C
A
T
G
G
C
A
G
C/T
3
A
T/C
T
-
2
-
-
T
2/-
G/A
G
T
C
T
C
5
T
T
C
C
G
A
T
A
A
2
T
T
G/C
G
T
C/G
C
A
G
T
G
C
C
C/T
A/G
T
C
T
T
A
A
A
C
T
A
G
T
T
A
-
T
A
T
G
C
G
G
G
G
C
A
-
G
2
C/2
G
C
G
A
A
G
T
3/-
T
C/T
T
A
C
A
T
2
G
-
-
T
A
A/T
T
T
2
G
C
A
A
C
C/3
G
A
2
C
C
G
A
-
G
G
C/T
A/G
C
G
T
T
C
A
-
T
C/T
G
C
T
A
A
8/-
G
C
C
A
C
G/T
A
T
G
C
T
C
A/G
C
G
5
G
G
A
C/7
G
T/C
A
G/C
C
A
-
C
C/T
G
-
-
T
T
A
-
T
G
C/T
C
T
G
-
-
T
2
34
-
T