Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 48,937 (bp)   Positions: 97
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
Crl:SD (UDEL) 
.0
.429
.977
.964
.0
.0
.0
.043
.002
.006
.001
.047
.178
.0
.005
.011
.001
.0
.001
.002
.003
.002
.004
.024
.036
--
--
--
--
.199
.0
.003
.596
.004
.001
.0
1.0
.021
.01
.001
.014
.001
.119
.385
.001
.004
.093
.498
.085
.07
.015
.001
.412
.013
.015
--
.198
.027
.132
.013
.035
.008
--
.57
.005
.001
.001
.002
.0
.913
.011
.002
.0
.001
.0
.002
.001
.0
.001
.0
.003
.0
.135
.007
.0
.001
.926
.964
.003
.001
.0
--
--
.021
.0
.835
.0
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
Alpk3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
A
G
C
T
A
C
G
G
C
C
A
A
A
A
T
G
T
C
A
C
A
T
T
T
C
T
T
A
C
T
5
G
T
T
G
T
A
A
C
C
2
C
C
A
G
A
G
G
G
A
A
C
T
A
G
A
T
C
A
T
C
A
A
C
A
T
G
A
G
C
A
C
A
G
A
T
A
T
G
G
G
A
A
C
4
8
G
T
C
T
C
C
C
C
T
  143,827,969
  143,828,194
  143,828,867
  143,828,869
  143,828,932
  143,829,203
  143,829,684
  143,832,103
  143,832,322
  143,832,718
  143,832,967
  143,833,169
  143,833,547
  143,834,084
  143,834,548
  143,834,814
  143,836,332
  143,836,450
  143,836,653
  143,837,570
  143,838,587
  143,841,085
  143,841,317
  143,841,359
  143,841,609
  143,841,988
  143,842,002
  143,842,030
  143,842,100
  143,845,050
  143,845,594
  143,846,455
  143,847,908
  143,848,233
  143,850,244
  143,850,294
  143,850,889
  143,852,011
  143,852,330
  143,852,696
  143,852,868
  143,853,293
  143,854,900
  143,855,201
  143,855,896
  143,855,897
  143,856,253
  143,856,521
  143,856,803
  143,856,932
  143,856,981
  143,857,143
  143,857,304
  143,857,438
  143,857,698
  143,858,391
  143,858,715
  143,859,091
  143,859,275
  143,859,756
  143,860,006
  143,860,052
  143,861,044
  143,862,252
  143,862,341
  143,862,381
  143,862,402
  143,862,448
  143,863,171
  143,863,834
  143,863,853
  143,864,494
  143,864,924
  143,865,149
  143,865,248
  143,865,283
  143,865,373
  143,865,390
  143,866,007
  143,866,014
  143,866,173
  143,866,575
  143,867,011
  143,867,239
  143,867,290
  143,867,365
  143,867,458
  143,867,490
  143,868,470
  143,869,235
  143,871,689
  143,872,262
  143,872,340
  143,873,049
  143,874,262
  143,875,543
  143,876,357
C
T
G
A
T
C
G
T
A
A
T
T
G
T
C
G
C
A
C
T
G
T
G
C
C
C
G
C
C
G
T
C
-
G/A
C
C
A
C
G
G
T
T
-
T
T
G
A
G
A
A
A
G
G
T
C
C
A
G
C
T
G
C
T
9
G
T
-
C
A
G
A
T
G
T
G
C
G
G
G
C
3
A
A
T
5
7
-
-
A
G
T
C
T
T
T
T
C