Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 14,711 (bp)   Positions: 101
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
FHL/EurMcwi (MCW) 
.0
.001
.297
.002
.003
.0
.132
.997
.732
.998
.0
.054
--
--
--
.955
.0
.431
.015
--
.234
.047
.995
.995
.001
.007
.003
.002
.001
.002
.104
.301
.002
.001
.001
.033
.0
.0
.122
.11
.004
--
--
--
--
--
--
--
--
--
--
--
.002
.025
.036
.025
.004
.006
.138
.031
--
--
--
--
.009
.012
.0
.001
.001
.344
.435
.379
--
--
--
--
--
--
--
--
--
--
.108
.392
.033
.003
.01
.285
.046
.003
.005
.0
.018
.265
.27
.001
.007
.788
.221
.011
.001
Aire
Aire
Aire
Aire
Aire
Aire
Aire
Aire
Aire
Aire
Aire
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
T
A
C
C
6
G
T
T
A
C
C
G
G
C
T
C
A
C
A
G
C
C
A
C
G
A
A
T
T
T
C
A
T
T
C
A
T
T
T
A
T
A
A
A
T
T
A
G
T
A
T
C
A
G
C
T
T
G
A
T
T
T
C
G
C
G
A
C
T
C
G
T
2
C
A
T
T
A
C
C
C
A
2
C
C
T
G
C
T
G
T
G
2
T
2
T
20
G
T
A
  13,536,877
  13,537,043
  13,537,308
  13,537,464
  13,537,588
  13,537,591
  13,537,757
  13,537,797
  13,537,840
  13,537,875
  13,537,966
  13,538,523
  13,538,729
  13,538,812
  13,539,168
  13,539,490
  13,539,697
  13,539,890
  13,540,065
  13,540,493
  13,540,775
  13,540,992
  13,541,712
  13,541,813
  13,541,864
  13,541,968
  13,542,111
  13,542,126
  13,542,313
  13,542,419
  13,542,597
  13,542,638
  13,542,670
  13,542,682
  13,542,754
  13,542,927
  13,542,994
  13,543,001
  13,543,142
  13,543,144
  13,543,196
  13,543,312
  13,543,315
  13,543,419
  13,543,430
  13,543,432
  13,543,436
  13,543,442
  13,543,459
  13,543,466
  13,543,467
  13,543,571
  13,543,627
  13,543,670
  13,543,676
  13,543,839
  13,543,843
  13,543,878
  13,544,294
  13,544,520
  13,544,662
  13,545,250
  13,545,280
  13,545,281
  13,545,503
  13,545,654
  13,545,933
  13,545,945
  13,545,972
  13,546,039
  13,546,083
  13,546,099
  13,546,199
  13,546,291
  13,546,351
  13,546,369
  13,546,447
  13,546,574
  13,546,648
  13,546,670
  13,546,739
  13,546,747
  13,546,819
  13,546,837
  13,547,096
  13,547,980
  13,547,987
  13,548,031
  13,548,260
  13,548,423
  13,548,514
  13,548,712
  13,548,890
  13,549,202
  13,549,203
  13,549,361
  13,549,371
  13,549,841
  13,549,889
  13,549,973
  13,550,332
A
C
T
T
C/-
-
A
C
A
G
T
2
2
A
T
C
T
G
T
-
A
T
T
G
T
A
G
T
C
C
4
T
G
C
C
T
G
C
G
A
G
3
5
G
G
C
2
T
T
C
G
C
2
G
5
T
C
C
A
5
C
C
T/-
-
A
A
T
G
T
C
A
C
C
-
C/T
A/G
2
C
G
T
T
T
T
-
3
T
A
A
A
C
2
C
A
2/-
-
2/-
T/3
-
C
C
G