Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 81,515 (bp)   Positions: 82
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
BUF/N (KNAW) 
.667
.055
.006
.004
.048
.435
.044
.145
.001
.091
.404
--
.0
.004
--
.212
--
.068
.795
.476
--
.002
.096
.004
.224
.989
.034
.002
.852
.028
.0
.015
.097
.016
.135
.125
--
--
--
--
--
--
--
--
.736
--
--
--
.002
.0
.005
.005
.001
.161
.011
.011
.05
.002
.001
.055
.006
.014
.941
.764
.239
.007
.011
--
--
--
.002
.001
.015
.002
.008
.099
.904
.948
.0
.004
.435
.182
Aff4
Aff4
Aff4
Aff4
Aff4
Aff4
Aff4
Aff4
Aff4
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
C
T
T
C
A
G
A
T
T
G
C
G
T
A
A
C
A
G
C
123
4
T
T
G
G
T
G
2
T
G
T
4
G
C
T
A
C
T
G
T
T
G
A
2
C
C
C
T
A
7
A
G
C
T
T
C
G
G
C
A
T
A
G
A
2
T
C
G
A
T
A
T
C
A
A
A
G
G
A
A
C
  38,476,023
  38,477,228
  38,477,274
  38,477,351
  38,479,278
  38,479,850
  38,479,993
  38,481,509
  38,481,554
  38,482,426
  38,482,445
  38,484,336
  38,487,506
  38,489,648
  38,491,262
  38,493,675
  38,493,720
  38,494,268
  38,494,453
  38,495,360
  38,496,226
  38,496,829
  38,497,094
  38,497,396
  38,497,406
  38,498,824
  38,502,579
  38,503,081
  38,504,491
  38,504,611
  38,505,024
  38,505,345
  38,507,030
  38,507,642
  38,508,351
  38,508,543
  38,510,479
  38,511,043
  38,511,985
  38,512,106
  38,513,465
  38,513,483
  38,513,535
  38,515,107
  38,515,374
  38,516,135
  38,516,805
  38,517,337
  38,523,754
  38,523,826
  38,526,511
  38,526,823
  38,526,945
  38,527,328
  38,527,691
  38,527,831
  38,527,995
  38,528,558
  38,528,832
  38,528,895
  38,528,973
  38,529,258
  38,529,840
  38,531,602
  38,532,079
  38,535,207
  38,535,689
  38,535,962
  38,536,102
  38,536,923
  38,538,755
  38,539,944
  38,540,338
  38,541,878
  38,542,286
  38,542,653
  38,542,750
  38,549,485
  38,550,185
  38,550,194
  38,550,512
  38,553,130
G
C/T
T/C
C
4
G
A
5
T/C
T/C
A
T
A
A
9
T
3
T
G/2
T
-
-
C
C
A
A
-
2
2/-
-
A
A
-
C
G
A
G
A
-
G/C
2
C
G/A
G
-
T
2
C/T
4
G
-
A/T
A
4
T/G
-
G
T
A
2
A/G
C
C
A
A/-
2/-
-
T
A
-
G
-
C
2
G
G
G
T
A
G
G
T