Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 65,486 (bp)   Positions: 126
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WKY/NCrl (KNAW) 
--
.015
.025
.003
.135
.111
.01
.137
.005
.0
.0
.01
.071
.006
.082
.121
.177
.043
.002
.003
.136
.021
.015
.0
.003
.019
.002
.009
.385
.203
.003
.481
.477
.075
.089
--
--
--
--
--
.243
.003
.005
.002
--
--
--
--
--
--
--
--
--
--
--
.141
--
--
.013
.081
.012
.0
.006
.001
.003
.003
.015
.019
.099
.089
.06
.029
--
--
--
.072
.131
.018
.261
.291
.68
--
--
--
.008
.023
.016
.012
.001
.003
--
--
.184
.16
--
.463
.013
--
.026
.246
.013
.052
.06
.008
.078
.001
.104
--
--
.323
.001
.001
.005
.074
.006
.004
.1
.0
--
--
.755
.179
.506
.047
.006
.105
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
Ackr2
--
--
--
Higd1a
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
C
G
C
A
G
3
A
G
A
A
T
C
T
A
C
T
T
4
C
C
18
G
A
G
A
A
T
A
G
6
4
C
G
2
G
C
C
G
T
T
C
7
G
13
G
75
T
C
C
A
A
T
T
C
C
T
T
A
C
C
C
A
T
C
T
C
A
A
C
G
T
C
G
A
G
C
47
G
A
A
G
T
G
G
G
G
G
G
G
C
G
C
7
T
G
A
A
A
A
A
T
A
T
T
G
C
T
T
3
4
T
C
G
C
A
A
T
4
A
A
C
T
A
A
  129,653,921
  129,654,428
  129,655,410
  129,660,479
  129,665,435
  129,667,220
  129,668,026
  129,668,172
  129,668,732
  129,669,515
  129,669,548
  129,670,138
  129,671,120
  129,672,000
  129,674,491
  129,674,858
  129,675,688
  129,676,015
  129,676,873
  129,676,874
  129,676,957
  129,677,197
  129,677,682
  129,678,118
  129,678,229
  129,678,421
  129,678,510
  129,678,519
  129,678,931
  129,678,941
  129,679,047
  129,679,247
  129,679,249
  129,679,557
  129,679,648
  129,680,147
  129,680,183
  129,680,730
  129,680,756
  129,680,906
  129,681,793
  129,682,366
  129,682,588
  129,683,730
  129,685,852
  129,686,611
  129,686,783
  129,688,173
  129,688,576
  129,688,969
  129,689,509
  129,689,541
  129,689,558
  129,689,878
  129,689,947
  129,690,107
  129,690,160
  129,690,202
  129,690,641
  129,690,900
  129,691,113
  129,691,544
  129,691,578
  129,691,622
  129,691,661
  129,691,662
  129,691,673
  129,691,676
  129,691,740
  129,691,741
  129,691,746
  129,691,757
  129,692,046
  129,692,138
  129,692,213
  129,692,339
  129,692,542
  129,692,561
  129,692,790
  129,692,974
  129,693,028
  129,693,138
  129,693,139
  129,693,143
  129,693,192
  129,693,239
  129,693,244
  129,693,248
  129,693,258
  129,693,261
  129,693,485
  129,693,525
  129,693,985
  129,694,035
  129,695,555
  129,696,291
  129,697,256
  129,697,439
  129,700,205
  129,700,213
  129,700,466
  129,700,847
  129,701,995
  129,702,598
  129,702,687
  129,702,959
  129,703,134
  129,704,701
  129,704,863
  129,704,979
  129,706,538
  129,706,543
  129,706,547
  129,706,835
  129,709,173
  129,709,433
  129,709,963
  129,710,313
  129,712,929
  129,712,930
  129,713,233
  129,713,442
  129,718,138
  129,718,528
  129,718,572
  129,719,005
10
13
T
T
7/9
G
A
-
T
-
-
G
2
A
T/3
G
A
C
9
4/-
T
13
-
A
G
A
20
T
G
G
A
6/-
4/-
T
C
-
G/5
T
T
A
G
G
T
-
4
-
G/3
-
C
T
5
T
G
G
5
G
T
C
11
G
T
T
A
2
G
T
C
G
2
2
T
C
107/106
T
C
G
A
A
-
A
C
AC/12
A
A
C
C
A
A
A
C
3
-
A
C/T
-
T/-
A
G
G
G
G
G
2
G
C
C
A
-
T/3
A
-
-
4
T
T
T
G
G
9
4/-
G
G
T
G
G
-