Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 382,963 (bp)   Positions: 93
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (KNAW) 
.024
.055
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.004
--
--
.013
--
--
--
.069
.003
.022
.005
.069
--
--
--
--
--
--
--
--
--
--
--
--
.401
.984
.158
.158
.005
--
--
.012
.067
.167
.165
.17
.004
.149
.036
.014
--
--
.0
--
.0
--
.003
.001
--
--
--
--
--
--
--
--
.002
.0
.003
.001
--
.182
.115
.0
.003
.0
.0
.0
--
--
.034
.057
.026
.005
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Trdn
Trdn
Trdn
Trdn
Trdn
Trdn
Trdn
Trdn
Trdn
Trdn
4
T
42
C
T
G
G
T
C
T
T
T
T
G
C
C
A
T
4
C
T
T
A
G
T
A
T
2
G
A
6
4
2
C
A
G
6
4
2
2
5
2
A
6
4
2
C
C
T
C
A
C
C
C
C
C
G
6
3
T
A
T
2
T
G
34
23
34
T
A
G
T
T
C
C
C
T
T
G
G
C
G
G
C
T
T
T
C
C
C
C
T
T
  26,869,966
  26,874,678
  26,875,658
  26,875,811
  26,875,818
  26,886,939
  26,886,970
  26,886,974
  26,886,977
  26,886,990
  26,886,993
  26,886,996
  26,887,014
  26,887,019
  26,887,059
  26,887,716
  26,888,021
  26,893,490
  26,904,710
  26,927,721
  26,929,266
  26,929,336
  26,947,773
  26,947,774
  26,961,830
  26,964,038
  26,964,122
  26,971,073
  26,980,951
  26,989,810
  26,991,203
  26,991,205
  26,991,207
  26,995,634
  26,995,641
  27,010,351
  27,020,429
  27,020,431
  27,020,433
  27,043,399
  27,043,404
  27,043,916
  27,066,674
  27,071,926
  27,071,928
  27,081,765
  27,086,026
  27,103,015
  27,117,457
  27,117,485
  27,117,500
  27,117,512
  27,117,554
  27,117,612
  27,117,638
  27,117,660
  27,117,682
  27,129,722
  27,129,887
  27,133,877
  27,139,044
  27,141,794
  27,145,323
  27,173,786
  27,176,309
  27,188,839
  27,188,877
  27,188,925
  27,188,967
  27,188,970
  27,188,974
  27,188,980
  27,192,808
  27,193,524
  27,193,531
  27,193,543
  27,193,581
  27,193,595
  27,193,641
  27,193,654
  27,193,681
  27,193,684
  27,193,694
  27,193,801
  27,193,805
  27,206,656
  27,210,947
  27,214,756
  27,214,768
  27,214,775
  27,214,785
  27,222,431
  27,224,820
4/-
T/-
-
-
-
2
A
-
-
-
-
-
-
-
-
-
A/-
-
-
C/2
13
T/16
A/G
G/A
T/-
61
T/2
2/-
G/9
10
6/-
4/-
2/-
-
3
3
6/-
4/-
2/-
-
-
-
3
6/-
4/-
2/-
-
C/9
G
G
T
-
A
-
-
T
T
6/-
3/-
A
A/-
9/11
2/-
T/-
T
-
-
-
C
G
2
-
C
2
-
2
-
-
T
2
-
2
-
2
A
T/-
T/2
-
-
-
-
-
T/-