Variant Visualizer (Variants)

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Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

RGSC 3.4

HCR/1Mco (UMich)

.0	.95	.376	.966	.0	.0	--	.0	.001	.001	.056	.0	.0	.008	.01	.0	.001	.003	.002	.002	.0	.0	.001	.001	.002	.284	.181	.016	.0	.0	.001	.0	.04	.037	.037	.0	1.0	.02	.017	.0	.001	.001	.002	.001	.004	.011	.001	.68	.0	.003	.001	.028	.002	--	--	.0	--	.002	.0	.002	.004	.288	.095	.015	.0	.001	.973	.005	.0	.967	.979	.099	.006	.0	.004	.0	.001	.006	.572	.001	.076	.204	.087	.055	.0	.0	.306	.03	.001	.01	.002	.003	.02	.895	.869	.803	.67	.363	.024	.136	.016	.01	.001	.002	.002	.002	.001	.002	--	--	--	--	--	--	.021	.001	.001	.182	.023	.006	.001	.001	.002	.252	.001	.0	.011	.898	.229	.019	.027	.028	.116	--	--	.548	.496	.002	.006	.963	.033	.0	.003	.008	.027	.009	.738	--	--	--	--	--	.008	.001	.002	.0	.006	.0	.003	.003	.004	.007	.0	.0	.001	.001	.007	.0	.0	.005	.037	.0	.001	.008	.007	.002	.003	.002	--	.025	.001	.01	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.054	.001	.007	.0	.012	.068	.061	.001	--	--	--	--	--	--	--	--	--	--	.03	.002	.013	.001	.0	.001	.001	.0	.006	.001	.008	.039	.004	.007	.004	.002	.023	.001	.002	.001	.062	.001	--	--	.016	.013	.056	.055	--	.001	.0	.023	.005	.005	.007	.021	.006	.007	.007	.002	.059	.017	.001	.01	.013	.014	.003	.002	.005	.047	.01	.017	.315	.217	.211	.003	.002	.001	.848	.001	.008	.664	.005	.006	.007	.013	.001	.639	.006	.0	.001	.001	.008	.087	.008	.001	.014	.004	.0	.107	.001	.007	.01	.0	.002	.0	.011	.218	.017	.005	.0	.0	.032	.388	.044	.003	.388	.001	.003	.0	.0	.007	.012	.001	.004	.013	.006	.011	.001	--	--	--	.037	.016	--	--	--	--	--	--	--	--	--	--	--	.006	.013	.038	.065	.969	.001	.0	.08	.0	.007	.0	.004	.0	.008	.023	.159	--	--	--	--	.0	.002	.002	.005	.002	.001	--	--	--	--	--	--	.0	.0	.86	.001	.011	.012	.005	.0	.001	.027	.0	.001	.0	.0	.018	.038	.014	--	.021	.019	.001	.0	.004	.009	.007	.011	.028	.02	--	--	--	--	--	--	--	--	.001	.004	.003	.355	.038	.019	.0	.002	.001	.008	.028	.025	.0	.0	.0	.0	.0	.0	.006	.001	.0	.0	.001	.008	.03	.0	.001	.002	.002	.002	.003	--	--	--	.002	.001	.001	--	.295	.0	.003	.0	.0
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3										Tmod3
T	C	T	C	G	G	G	T	C	C	A	G	A	G	G	C	T	C	C	G	G	T	G	C	C	T	C	T	A	A	C	T	G	C	C	T	C	T	T	A	G	A	A	A	T	T	A	T	T	T	C	C	G	G	A	A	G	G	T	C	T	T	A	A	C	A	T	A	A	A	T	A	T	G	G	G	T	C	G	T	A	C	G	T	C	T	G	G	C	C	G	T	T	G	A	G	G	T	A	C	G	T	G	G	A	G	G	C	G	T	T	C	T	C	A	C	G	T	C	C	G	T	G	G	C	C	C	G	C	T	G	A	T	C	A	A	T	T	G	T	G	C	C	C	C	C	T	A	C	C	T	A	C	C	C	T	T	G	G	T	T	T	G	C	G	G	A	G	G	T	C	T	T	G	A	T	T	C	A	G	C	A	C	G	A	C	G	C	T	G	C	T	C	G	C	G	T	A	C	C	C	A	A	T	A	C	A	G	G	T	A	C	C	C	C	C	G	G	A	T	C	T	T	G	A	T	A	A	G	C	C	T	G	T	A	G	T	T	C	C	C	A	T	C	G	C	A	A	G	A	C	G	G	T	G	C	T	A	T	C	C	G	G	G	G	G	C	T	T	C	C	T	C	G	G	A	T	C	C	G	A	A	T	A	G	C	T	G	C	C	G	G	A	G	T	T	T	C	T	C	T	C	C	A	C	T	C	T	C	T	A	G	G	A	T	T	G	A	A	T	C	A	C	T	C	T	A	A	G	G	C	A	A	A	C	T	C	C	G	G	C	A	C	G	A	C	C	G	G	T	A	A	G	C	A	A	T	C	A	G	C	C	C	G	C	A	T	A	A	G	T	G	C	G	A	A	G	G	T	C	G	C	G	T	C	T	T	A	T	G	G	G	G	T	A	G	G	A	G	C	T	T	C	A	C	G	A	C	A	A	T	G	T	G	C	C	C	T	T	A	C	T	G	G	C	C	C	C	C	G	A	T	C	A	C	G	G	G	A	C	A	T	T	A	G	G	G	C	T	C
80,317,923	80,318,182	80,318,231	80,318,411	80,318,527	80,318,625	80,318,851	80,319,304	80,319,597	80,319,619	80,319,727	80,320,051	80,320,135	80,320,334	80,320,703	80,320,755	80,320,896	80,321,019	80,321,304	80,321,320	80,321,627	80,322,277	80,322,307	80,322,314	80,322,318	80,322,376	80,322,408	80,322,640	80,322,789	80,323,142	80,323,186	80,323,203	80,323,322	80,323,323	80,323,324	80,323,510	80,323,634	80,324,058	80,324,236	80,324,509	80,324,515	80,324,519	80,324,523	80,324,527	80,324,634	80,324,651	80,325,282	80,325,499	80,325,787	80,326,215	80,326,301	80,326,403	80,326,541	80,326,719	80,326,933	80,327,043	80,327,215	80,327,766	80,327,773	80,327,872	80,328,272	80,328,319	80,328,470	80,328,475	80,329,033	80,329,107	80,329,132	80,329,247	80,329,294	80,329,371	80,329,483	80,330,025	80,330,427	80,331,364	80,331,589	80,332,437	80,332,481	80,332,976	80,332,998	80,333,973	80,334,220	80,334,680	80,335,022	80,335,025	80,335,060	80,335,364	80,335,865	80,336,006	80,336,143	80,336,366	80,336,368	80,336,421	80,336,939	80,337,211	80,337,225	80,337,262	80,337,294	80,337,470	80,337,907	80,338,659	80,338,733	80,339,393	80,339,960	80,340,092	80,340,218	80,341,305	80,341,519	80,341,731	80,341,832	80,341,913	80,342,219	80,342,380	80,342,456	80,342,631	80,342,829	80,343,095	80,343,096	80,343,214	80,343,358	80,343,363	80,343,398	80,343,609	80,343,741	80,343,782	80,343,819	80,343,925	80,343,949	80,344,092	80,344,193	80,344,218	80,344,283	80,344,285	80,344,311	80,344,559	80,344,610	80,344,705	80,344,707	80,344,782	80,344,856	80,344,997	80,345,111	80,345,348	80,345,432	80,345,645	80,345,675	80,345,734	80,346,519	80,346,600	80,346,678	80,347,304	80,347,498	80,347,548	80,347,919	80,347,929	80,348,027	80,348,048	80,348,344	80,348,621	80,348,851	80,348,862	80,348,922	80,349,005	80,349,039	80,349,067	80,349,572	80,349,577	80,349,593	80,349,875	80,350,028	80,350,085	80,350,120	80,350,290	80,350,369	80,350,839	80,350,864	80,350,929	80,350,937	80,350,967	80,351,102	80,351,209	80,351,266	80,351,561	80,351,601	80,351,602	80,351,643	80,351,665	80,351,828	80,351,839	80,351,866	80,352,087	80,352,118	80,352,290	80,352,331	80,352,393	80,352,400	80,352,405	80,352,605	80,352,624	80,352,787	80,352,854	80,352,871	80,352,945	80,352,960	80,353,040	80,353,153	80,353,212	80,353,322	80,353,326	80,353,327	80,353,413	80,353,468	80,353,874	80,354,066	80,354,178	80,354,266	80,354,389	80,354,543	80,354,619	80,354,650	80,354,728	80,354,753	80,354,755	80,354,843	80,354,901	80,354,918	80,355,048	80,355,116	80,355,148	80,355,341	80,355,470	80,355,620	80,355,850	80,356,038	80,356,126	80,356,201	80,356,218	80,356,222	80,356,239	80,356,399	80,356,401	80,356,510	80,356,511	80,356,647	80,356,793	80,356,851	80,356,904	80,357,074	80,357,076	80,357,079	80,357,099	80,357,104	80,357,137	80,357,141	80,357,195	80,357,271	80,357,306	80,357,404	80,357,516	80,357,563	80,357,569	80,357,614	80,357,866	80,358,646	80,358,711	80,358,767	80,359,112	80,359,320	80,359,450	80,359,559	80,359,657	80,359,723	80,359,748	80,359,925	80,360,074	80,360,105	80,360,200	80,360,468	80,360,470	80,360,475	80,360,476	80,360,510	80,360,614	80,360,735	80,360,808	80,360,962	80,360,988	80,361,089	80,361,100	80,361,836	80,361,914	80,362,167	80,362,457	80,362,487	80,362,505	80,362,646	80,362,671	80,362,678	80,362,711	80,362,719	80,362,968	80,362,977	80,363,011	80,363,021	80,363,022	80,363,091	80,363,117	80,363,213	80,363,235	80,363,307	80,363,441	80,363,545	80,363,627	80,364,010	80,364,582	80,364,669	80,364,704	80,365,231	80,365,257	80,365,630	80,365,783	80,365,953	80,365,962	80,366,008	80,366,051	80,366,103	80,366,134	80,366,153	80,366,238	80,366,358	80,366,370	80,366,375	80,366,386	80,366,424	80,366,426	80,366,440	80,366,451	80,366,462	80,366,489	80,366,617	80,366,802	80,366,811	80,366,878	80,366,970	80,367,152	80,367,531	80,367,621	80,367,953	80,367,976	80,368,079	80,368,097	80,368,156	80,368,179	80,368,201	80,368,250	80,368,430	80,368,818	80,368,842	80,368,880	80,368,922	80,368,956	80,368,979	80,368,992	80,369,035	80,369,078	80,369,083	80,369,129	80,369,181	80,369,184	80,369,267	80,369,297	80,369,298	80,369,677	80,369,695	80,369,749	80,369,883	80,370,048	80,370,058	80,370,309	80,370,466	80,370,477	80,370,684	80,370,938	80,370,981	80,370,993	80,371,033	80,371,073	80,371,106	80,371,218	80,371,433	80,371,539	80,371,566	80,371,646	80,371,931	80,372,091	80,372,140	80,372,148	80,372,269	80,372,349	80,372,357	80,372,464	80,372,607	80,372,611	80,372,614	80,372,704	80,372,741	80,372,932	80,373,139	80,373,498	80,373,712	80,373,774	80,374,121	80,374,186	80,374,190	80,374,195	80,374,206	80,374,391	80,374,594	80,374,680	80,374,681	80,374,711	80,374,714	80,374,751	80,374,906	80,374,958	80,374,959	80,374,978	80,375,207	80,375,245	80,375,246	80,375,567	80,375,619	80,375,645	80,375,674	80,375,913	80,376,070	80,376,071	80,376,085	80,376,402	80,376,560	80,376,595	80,376,611	80,376,933	80,376,942	80,376,945	80,377,001	80,377,089	80,377,547	80,377,667	80,377,766	80,377,808
T/C	C/T	C	C/T	G/A	G/A	G/A	T/C	C/T	C/T	A/G	G/T	A/G	G/A	G/T	C/T	T/C	C/A	C/T	G/A	G/A	T/C	G/A	C/T	C/T	T/C	C/T	T/A	A/C	A/G	C/T	T/G	G/T	C/T	C/T	T/C	C/T	T/C	T/C	A/G	G/A	A/G	A/G	A/G	T/C	T/A	A/G	T/C	T/C	T/C	T	C/T	G/T	G/C	A/C	A/G	G/A	G/A	T/A	C/T	T/A	T/C	A/C	A/C	C/G	A/G	T/C	A/C	G	A/G	T/C	G	A	T	G/A	G/C	T/C	C/A	G/A	T/C	A/G	C/T	G/A	T/C	C/A	T/A	G/T	G/A	C/T	C/A	G/T	T/G	T/G	G/A	A/G	G/A	G/A	T/G	A/G	C/T	G/A	T/C	G/C	G/A	A/T	G/A	G/A	C/G	G/A	T/C	T/C	C/T	T/C	C/T	G	C/T	G/A	T/A	C/T	C/T	G/C	T/C	G/A	G/T	C/T	C/A	C/G	G/T	C/T	T/C	G/C	A/G	T/C	C/G	A/T	A/T	T/C	T/C	G/C	T/C	G/T	C/T	C/T	T	C/T	C/T	T/C	A/C	C/A	C/T	T/C	A/G	C/T	C/T	C/T	T/C	T/C	G/A	G/A	T/A	T/C	T/C	G/A	C/T	G/C	G/A	A/G	G/C	G/C	T/A	C/T	T/C	T/C	G/A	A/G	T/C	T/C	C/G	A/G	G/T	C/A	A/G	C/T	G/T	A/G	C/T	G/A	C/T	T/A	G/A	C/G	T/C	C/G	G/A	C/G	G/A	T/C	A/C	C/G	C/T	C/G	A/G	A/G	T/C	A/T	C/T	A/G	G/C	G/A	T/C	A/G	C/T	C/T	C/T	T	C/A	G/A	G/A	A/G	T/C	C/T	T/C	T/C	G/A	A/G	T/C	A/C	A/G	G/A	C/T	C/T	T/A	G/A	T/C	A/G	G/A	T/C	T/G	C/T	C/T	C/T	A/T	T/C	C/T	G/A	C/T	A/G	A/G	G/A	A/G	C/T	G/A	G/A	T/C	G/A	C/A	T/C	A/G	T/C	C/T	C/A	G/C	G/A	G/A	G/A	G/T	C/A	T/C	T/A	C/T	C/T	T/C	C/T	G/A	G/T	A/T	T/C	C/G	C/T	G/A	A/T	A/G	T/G	A/T	G/C	C/T	T/C	G/A	C/A	C/T	G/A	G/A	A/C	G/A	T/C	T/C	T/A	C/G	T/C	C/T	T/A	C/T	C/A	A/C	C/T	T/C	C/A	T/C	C/T	T/C	A/C	G/A	A	A/G	T/C	T/C	G/A	C	A/T	T/C	C/T	A/T	C/G	T/C	T	A	A/T	A/G	G/A	G/A	C/T	A/T	A/T	A/G	C/T	T/G	C/T	C/T	G/A	G/A	A	A/G	C/T	G/T	C	C/T	C/T	G/A	G/A	T/C	A/G	A/C	G/T	C/T	A/G	A/G	T/C	C/T	A/C	G/A	C/T	C/T	C/A	G/T	C/A	A/T	T/C	A/G	A/G	G/A	T/A	G/C	C/T	G/T	A/C	A/G	G/T	G/A	T/C	C/T	G/A	C/G	G/A	T/C	C/T	T/C	T/C	A/G	T/C	G/T	G/A	G/A	G/A	T/C	A/G	G/A	G/C	A/G	G/A	C/A	T/C	T/C	C/T	A/G	C/T	G/C	A/T	C/A	A/G	A/G	T/C	G/A	T/C	G/A	C/G	C/T	C/A	T/C	T/C	A/C	C/T	T/C	G/A	G/T	C/A	C/G	C/T	C/T	C/G	G/T	A/G	T/C	C/T	A/G	C/T	G/A	G/T	G/A	A/C	A	C	G	C	G	T	G/A	G/C	C/T	T/C	C/G