Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

LE/Stm (SOLiD) (KNAW)

.199	--	.001	.079	.001	.036	.0	.335	.036	.002	.0	.003	.095	.011	.002	.002	.001	.0	.038	.003	.037	.0	.025	.009	.006	.002	.003	.979	.001	.044	.0	.034	.001	.001	.002	.003	.011	.076	.017	.001	.001	.006	.001	.007	.004	.045	.002	.001	.003	.0	.15	.053	.019	.005	.816	.057	.055	.009	.552	.006	.002	.001	.929	.983	.0	.008	.062	.049	.171	.0	.0	.018	.014	.105	.283	.395	.966	.963	.742	.984	.594	.004	.001	.001	.023	.009	.0	.589	--	.003	.002	.001	.056	.109	.005	.034	.202	.012	.021	.0	.075	.002	.094	.226	.012	.085	.031	.004	.32	.009	.014	.012	.012	.198	.02	.056	.099	.015	.29	.001	.145	.001	.001	.0	.018	.008	.054	.217	.001	--	--	--	--	--	--	--	--	--	.004	.001	.0	.001	.001	.004	.095	.244	--	.006	.994	.005	.008	.002	.016	.54	.068	.026	.796	.02	.0	.132	.003	.091	.055	.017	.023	.0	.004	.005	.002	.106	.044	.067	.002	.051	.004	.183	--	.001	.01	.0	.001	.0	.993	.908	.007	.982	.999
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a										Scn1a
G	A	C	A	A	A	C	C	T	C	T	G	G	G	C	C	A	A	G	G	A	A	A	A	G	C	A	C	9	G	C	A	C	T	T	C	T	C	G	A	T	3	G	G	T	T	A	A	C	T	C	C	C	G	G	G	3	G	A	G	C	A	A	G	A	A	A	C	G	T	C	T	C	A	G	T	A	2	A	G	T	A	A	G	A	A	G	T	A	G	G	G	G	T	A	C	C	A	A	T	G	C	G	A	G	G	T	G	C	A	G	C	C	T	C	T	G	T	T	2	A	C	T	T	G	T	G	C	A	C	A	C	C	C	C	G	G	T	G	T	T	C	C	G	C	C	C	T	C	G	A	G	T	T	G	G	A	T	A	G	C	C	T	T	T	C	G	T	A	C	A	T	C	A	A	T	C	T	C	T	G	A	T	A	T	A	C
59,027,921	59,043,768	59,052,350	59,052,372	59,054,384	59,054,396	59,054,615	59,072,232	59,072,465	59,072,957	59,073,104	59,073,624	59,073,888	59,073,948	59,073,950	59,074,028	59,074,063	59,074,089	59,074,160	59,074,164	59,074,273	59,074,358	59,074,490	59,074,841	59,075,191	59,075,485	59,076,126	59,076,246	59,076,805	59,076,860	59,076,957	59,077,229	59,077,649	59,077,661	59,077,753	59,078,001	59,078,067	59,078,192	59,078,501	59,080,167	59,080,292	59,080,338	59,081,455	59,081,821	59,082,414	59,082,506	59,082,722	59,082,851	59,082,940	59,082,962	59,083,143	59,083,240	59,083,319	59,083,599	59,083,928	59,084,460	59,085,359	59,085,479	59,085,570	59,085,916	59,085,956	59,085,979	59,086,010	59,086,095	59,086,140	59,086,203	59,086,270	59,086,596	59,086,703	59,087,136	59,087,137	59,087,396	59,087,639	59,087,656	59,087,720	59,087,749	59,088,069	59,088,097	59,088,278	59,088,334	59,088,505	59,089,229	59,089,426	59,089,530	59,089,671	59,089,768	59,089,941	59,090,002	59,090,489	59,092,028	59,092,096	59,092,122	59,092,215	59,092,351	59,092,591	59,093,144	59,093,414	59,093,427	59,093,453	59,094,287	59,094,338	59,095,069	59,095,236	59,095,396	59,095,881	59,096,195	59,096,287	59,096,317	59,096,514	59,098,534	59,098,551	59,101,427	59,101,435	59,101,819	59,102,575	59,105,836	59,106,013	59,106,139	59,106,261	59,107,373	59,107,743	59,108,081	59,108,555	59,108,759	59,108,903	59,108,987	59,109,006	59,109,081	59,109,220	59,109,379	59,109,506	59,109,843	59,110,007	59,110,249	59,110,273	59,110,326	59,110,375	59,110,523	59,110,560	59,110,573	59,110,812	59,111,161	59,111,218	59,111,297	59,111,438	59,111,639	59,112,746	59,113,271	59,113,632	59,115,197	59,115,285	59,115,568	59,118,011	59,118,149	59,118,788	59,120,310	59,120,462	59,122,438	59,123,614	59,124,010	59,124,963	59,125,018	59,125,294	59,125,764	59,126,795	59,127,338	59,127,949	59,127,996	59,128,186	59,128,504	59,128,644	59,128,785	59,129,653	59,130,114	59,130,409	59,130,716	59,131,368	59,131,863	59,132,540	59,132,660	59,133,614	59,134,204	59,134,350	59,134,354	59,134,774	59,135,149	59,135,304
2	A/G	T	C	2	A/2	C/-	T	T/-	T	C	G/3	A	A	G	T	G	G	A	A	C	C	10	C	A	T	G	T	9/-	A	T	G	T	C	C	A	C	T	A	G	G	3/-	C	-	A	A	A/G	G	G	C	C/T	T	T	2	A	A	-	A	A/G	C	T	C	G	C	G	4	A/2	T	G/C	C	A	C	T	2	A	C	T	-	G	-	-	G	4	A	T	C	C	C	G	G/2	G/T	A	A	-	G	T	T	-	G	C	T	T	A	C	T	G/2	A	A	G	4	4	C/2	C/T	10	T	C	A	G	C	-	11	T	-	C	A	C	A	T	G	C/A	T	G	G	A	C/T	A	T	A	A	C	G	A	T	A	T	T	T	T/A	T	A	C	3	C	5	A	G/6	G	C	G	A	A	T	A	T/G	C	C/T	A	T/-	G	T	G	C	G	G	G	T/2	C/T	C	A	T/C	A	T	2	T	C	G	T