Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 14,535 (bp)   Positions: 61
Conservation 
Genes ( + ) 
Genes ( - ) 
RGSC 3.4  
SR/JrHsd (MCW) 
.007
.002
.005
1.0
.005
.001
.006
.003
.437
.001
.005
.004
.004
.0
.027
.0
.947
.723
.0
.086
.015
.0
.0
.067
--
--
--
--
--
--
--
--
--
--
.003
.0
.002
.04
.02
.007
.009
.012
.0
.001
.001
.003
.002
.001
.308
.003
.007
.0
.998
.001
.0
.006
.001
.002
.026
.0
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Saxo2
Saxo2
Saxo2
Saxo2
Saxo2
Saxo2
Saxo2
T
A
A
T
C
T
G
T
C
T
T
G
C
C
G
G
T
C
G
T
G
C
A
A
C
A
T
G
T
A
T
A
A
A
A
T
G
T
G
C
T
T
A
C
C
G
T
C
C
A
T
G
G
T
G
T
G
T
C
T
G
  138,906,035
  138,906,199
  138,907,235
  138,908,363
  138,908,741
  138,908,803
  138,908,964
  138,908,970
  138,909,256
  138,909,460
  138,909,521
  138,909,532
  138,909,601
  138,909,620
  138,909,805
  138,909,873
  138,910,084
  138,910,106
  138,910,581
  138,910,941
  138,911,316
  138,911,347
  138,911,969
  138,912,237
  138,912,653
  138,912,680
  138,913,037
  138,913,126
  138,913,199
  138,913,313
  138,913,405
  138,913,434
  138,913,665
  138,913,925
  138,913,954
  138,914,197
  138,914,280
  138,914,288
  138,914,297
  138,914,306
  138,914,320
  138,914,335
  138,914,346
  138,914,596
  138,914,599
  138,914,646
  138,915,112
  138,915,471
  138,915,869
  138,916,502
  138,917,030
  138,917,153
  138,917,961
  138,918,055
  138,918,324
  138,919,143
  138,919,153
  138,919,457
  138,919,868
  138,920,246
  138,920,294
A
G
G
C
T
C
C
C
A
C
A
A
A
T
T
A
C
A
A
A
A
T
G
T
T
G
A
A
C
G
C
T
G
G
G
C
A
T/G
T
T
C
G
G
T
T
C
C
T
T
C
C
A
A
A
A
C
C
C
G
A
C