Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 21,764 (bp)   Positions: 68
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LE/Stm (SOLiD) (KNAW) 
.001
.056
.012
.007
.001
.012
.004
.0
.01
--
--
--
--
--
.003
.004
.003
.004
.003
.045
.692
.012
.179
.0
.034
.132
.006
.099
.134
.0
.033
.014
.132
.163
--
.045
.0
.804
.0
.101
.019
.001
.0
.0
.0
.081
.127
.003
.005
.0
.0
.003
.001
.001
.0
.008
.0
.004
.001
.154
.013
.0
.013
.0
.004
.046
.0
.018
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
C
G
G
G
G
C
T
G
A
T
T
T
T
T
T
C
G
A
T
A
G
A
C
G
G
T
C
T
G
G
A
A
2
G
T
T
A
T
A
T
C
T
G
T
C
A
C
G
C
G
A
C
A
T
A
G
A
G
T
C
C
G
G
C
G
T
  91,957,947
  91,961,568
  91,961,827
  91,962,793
  91,963,281
  91,963,594
  91,964,408
  91,966,037
  91,967,439
  91,967,635
  91,967,737
  91,967,857
  91,967,919
  91,968,003
  91,968,204
  91,968,205
  91,968,224
  91,968,244
  91,968,277
  91,968,320
  91,968,334
  91,968,516
  91,969,141
  91,969,168
  91,969,322
  91,969,443
  91,969,489
  91,972,111
  91,972,853
  92,007,551
  92,012,211
  92,018,123
  92,018,169
  92,018,833
  92,020,678
  92,393,477
  92,393,532
  92,396,686
  92,396,987
  92,397,707
  92,398,942
  92,399,349
  92,399,621
  92,399,857
  92,400,037
  92,400,302
  92,400,315
  92,400,586
  92,400,884
  92,401,113
  92,401,127
  92,401,711
  92,402,308
  92,403,036
  92,403,514
  92,403,725
  92,404,037
  92,404,351
  92,404,535
  92,404,871
  92,406,012
  92,406,650
  92,407,177
  92,407,303
  92,407,407
  92,407,772
  92,407,953
  92,408,769
C
G
T
A
A
A
A
T
2
G/T
T
3
5
C
C
G
G
T
A
G
5
G
5
2
T
-
A
C
T
T/-
-
A
C
G
-
A
G
C
A/G
2
G
T/C
G
C
A
C
C/G
G
T
A
A
A
G
A
G
C
C
A
C
T
C
T
A
C
A
-
A
C