Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 52,878 (bp)   Positions: 64
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (MCW) 
.994
.007
--
--
--
.046
--
--
--
--
.335
.009
.142
.009
--
.013
.996
.381
.167
.17
.002
.031
.017
.0
.001
.784
.009
--
--
--
.014
.001
.096
--
.001
.019
.004
.178
.013
.047
--
--
--
.01
.014
.112
.192
.198
--
--
.015
.0
.047
.0
--
--
.0
.009
.0
.0
.001
.004
.001
.999
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Pdgfra
Pdgfra
Pdgfra
Pdgfra
Pdgfra
Pdgfra
Pdgfra
C
T
A
A
G
T
C
C
C
C
4
C
T
T
G
G
A
G
A
A
2
A
T
4
2
T
A
2
A
A
C
A
T
G
A
T
A
G
T
C
3
C
C
T
T
A
G
G
T
14
G
G
A
A
8
T
A
C
G
T
T
T
T
G
  35,356,495
  35,359,966
  35,361,862
  35,361,872
  35,363,171
  35,363,421
  35,364,989
  35,364,993
  35,364,995
  35,364,999
  35,365,206
  35,367,670
  35,367,950
  35,368,145
  35,369,168
  35,369,281
  35,370,713
  35,371,410
  35,371,608
  35,372,073
  35,374,327
  35,374,525
  35,374,707
  35,376,255
  35,376,257
  35,376,861
  35,377,974
  35,382,396
  35,382,697
  35,382,863
  35,384,140
  35,386,510
  35,389,137
  35,391,940
  35,392,546
  35,393,946
  35,393,955
  35,394,545
  35,394,873
  35,394,954
  35,395,106
  35,395,111
  35,395,114
  35,396,269
  35,396,329
  35,397,035
  35,397,054
  35,397,058
  35,397,447
  35,397,469
  35,398,412
  35,399,009
  35,399,887
  35,400,057
  35,400,544
  35,400,563
  35,401,263
  35,402,215
  35,402,669
  35,404,949
  35,405,675
  35,406,856
  35,408,159
  35,408,756
2
C
G/11
A/G
2
G
C/T
C/T
C/T
C/T
-
T
7
C
A
G/-
G
A
3
T
-
G
A
4/-
2/-
G
C
-
G
G
A
G
3/TA
T
T
A
-
A
-
T
-
T
T
C
C
9
G/A
G/A
T/A
-
A
A
G
T
8/-
T/C
G
A
A
T/-
-
G
C
A