Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 270,740 (bp)   Positions: 453
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.477
.0
.005
.003
.002
.001
.003
.0
.038
.0
.847
.0
.003
.055
.0
.022
.013
.187
.073
--
--
.0
--
--
--
.024
.003
.012
--
.012
.984
.009
.001
.007
.007
.002
.183
.001
.001
.085
.003
.02
.0
.001
.095
.282
.566
.281
.023
.003
.072
.006
.002
.001
.0
.121
.661
.662
.038
.006
.001
.001
.173
.067
.962
.002
.011
.001
.505
.0
.002
.002
.001
.02
.006
.0
.013
.001
.05
.003
.039
.004
.184
.226
.224
.059
.247
.001
.005
.003
.003
.001
.01
.007
--
--
--
.688
--
--
.009
.122
.0
.008
.001
.075
--
--
--
.001
.026
.0
.116
.463
.003
.001
.009
--
.031
.844
.029
.893
.001
.007
.018
.001
.001
.255
.003
.111
.596
.02
.238
.017
.001
.0
.002
.004
.012
.026
.029
.334
.001
.005
.001
.008
.005
.001
.0
.547
.992
.222
.004
.135
.998
.001
.0
.002
.0
.002
.005
.0
.0
.0
.008
.0
--
--
.614
.086
.184
--
--
.039
.104
.011
.007
.03
.0
.01
.132
.022
.026
.001
.066
.021
.018
.009
.0
--
.006
.041
.006
.003
.008
.04
.039
.0
.045
.003
.001
.013
.018
.0
.033
.019
.001
.137
.001
.001
.001
.123
.181
.0
.627
.998
.002
.85
.935
.002
.022
.04
.15
.452
.0
.016
.077
.058
.027
.121
.01
.263
.03
.26
.123
.112
--
.009
.001
.001
.14
.001
.012
.7
.042
.013
.081
.042
.006
.023
.012
.003
.001
.067
.001
.002
.002
.031
.014
.03
.001
.211
.077
.015
.128
.005
--
--
--
--
--
--
--
--
--
--
--
.236
.001
.0
.001
.002
.014
.462
.002
.0
.0
.001
.0
.011
.0
.001
.0
.0
.0
.0
.012
.014
.015
.008
.002
.023
.06
.001
.0
.739
.011
.01
.004
.054
.0
.001
.001
.001
.087
.213
.489
.495
.114
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.04
.047
.086
.006
.003
.417
.001
.008
.134
.013
.001
.098
.003
.017
.866
.012
.224
.333
.0
.995
1.0
.167
.45
.032
.001
.029
.004
.354
.012
.01
.009
.019
.006
.001
.001
.009
.016
.0
.021
.0
.001
.013
.0
.0
.417
.005
.214
.064
.14
.126
.024
.42
.819
.824
.004
.087
.001
.001
.0
.009
.001
.292
.038
.079
.017
.009
.185
.003
.022
.111
.004
.0
.0
--
--
--
.003
.522
.101
.111
.005
.006
.004
.078
.069
.062
.042
.612
.636
.01
.01
.01
.031
.0
.438
.0
.085
.1
.001
.0
.78
.058
.001
--
--
--
--
--
--
.036
.194
.181
.176
--
--
.045
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
Pappa2
T
T
A
T
C
T
G
T
A
A
4
G
C
T
T
C
2
G
A
A
A
A
A
G
C
C
C
G
A
C
A
2
C
3
8
A
A
3
C
A
T
A
A
G
C
T
T
T
2
T
G
T
T
T
G
T
C
C
C
A
C
A
G
G
G
C
A
T
A
A
T
A
T
10
A
A
A
A
T
C
T
6
G
T
C
G
A
G
G
A
T
T
G
2
T
T
A
G
T
A
2
T
A
A
T
C
T
C
T
G
A
A
A
A
A
G
G
G
A
A
T
T
T
A
C
C
G
G
T
T
A
G
C
A
G
T
T
C
A
5
A
G
G
A
2
C
T
A
G
T
T
A
C
G
A
C
T
A
C
G
T
T
G
G
G
T
T
G
C
C
C
G
A
T
A
T
T
8
C
C
T
T
C
T
C
C
C
C
A
A
A
2
G
A
2
A
A
C
G
A
C
C
C
T
A
G
C
G
G
G
A
T
G
A
A
A
G
C
T
6
T
C
10
G
C
G
G
4
G
G
A
A
G
12
A
T
A
A
7
T
A
C
T
G
A
T
27
T
T
T
T
T
G
G
G
T
G
G
T
G
A
C
C
C
G
G
A
A
T
G
A
T
T
T
C
T
A
C
C
G
T
C
C
C
G
G
G
G
A
T
C
T
C
3
G
G
3
A
3
T
A
A
G
C
A
A
A
A
A
A
C
A
T
G
T
A
A
A
A
T
T
A
C
A
G
A
T
10
A
G
G
C
T
T
C
G
A
G
T
G
A
A
C
A
T
A
T
T
A
G
A
T
A
A
T
C
G
6
A
C
G
A
A
G
A
A
C
C
T
C
G
A
11
11
3
C
C
T
A
A
T
C
T
T
12
T
A
T
2
G
A
C
G
G
T
A
C
T
G
C
A
G
A
C
A
G
A
A
G
C
C
C
C
C
C
A
4
2
A
C
A
A
A
5
4
G
C
C
A
A
G
2
4
2
3
G
C
C
C
A
A
C
T
G
C
G
T
T
C
C
2
4
A
  81,303,841
  81,303,946
  81,303,955
  81,303,999
  81,304,022
  81,304,024
  81,304,029
  81,304,575
  81,304,676
  81,305,803
  81,305,983
  81,309,155
  81,309,166
  81,309,573
  81,309,654
  81,309,705
  81,310,757
  81,310,781
  81,312,522
  81,313,635
  81,319,751
  81,319,892
  81,320,543
  81,320,660
  81,320,722
  81,321,477
  81,322,432
  81,323,503
  81,324,232
  81,324,716
  81,325,278
  81,325,775
  81,328,354
  81,328,837
  81,329,073
  81,329,609
  81,330,006
  81,332,617
  81,333,349
  81,333,941
  81,334,235
  81,336,679
  81,337,692
  81,337,758
  81,337,954
  81,337,985
  81,338,046
  81,338,220
  81,338,537
  81,338,969
  81,339,992
  81,340,013
  81,340,169
  81,340,332
  81,340,431
  81,340,659
  81,340,682
  81,341,285
  81,341,557
  81,341,926
  81,342,099
  81,342,260
  81,342,418
  81,342,814
  81,343,380
  81,344,081
  81,344,251
  81,344,277
  81,344,905
  81,344,939
  81,344,950
  81,344,969
  81,345,025
  81,345,132
  81,345,273
  81,345,282
  81,345,563
  81,345,847
  81,345,952
  81,352,595
  81,352,617
  81,352,679
  81,352,743
  81,352,779
  81,352,783
  81,352,862
  81,352,946
  81,353,666
  81,353,676
  81,353,739
  81,353,972
  81,354,363
  81,354,583
  81,354,962
  81,355,642
  81,355,703
  81,355,861
  81,356,372
  81,356,776
  81,356,984
  81,357,003
  81,357,041
  81,357,413
  81,357,467
  81,358,076
  81,358,216
  81,358,622
  81,358,630
  81,358,760
  81,358,875
  81,359,048
  81,359,187
  81,359,261
  81,359,503
  81,359,570
  81,359,717
  81,364,055
  81,364,089
  81,364,147
  81,364,265
  81,364,381
  81,364,725
  81,365,077
  81,365,224
  81,365,603
  81,365,851
  81,366,040
  81,367,178
  81,367,192
  81,367,941
  81,368,100
  81,368,186
  81,368,988
  81,369,784
  81,369,876
  81,370,224
  81,370,494
  81,370,568
  81,371,154
  81,371,156
  81,371,160
  81,371,617
  81,371,716
  81,372,245
  81,372,399
  81,372,952
  81,373,258
  81,373,812
  81,373,857
  81,374,232
  81,374,416
  81,374,529
  81,375,293
  81,375,925
  81,376,563
  81,376,826
  81,377,012
  81,377,063
  81,377,207
  81,377,270
  81,377,448
  81,377,760
  81,377,894
  81,378,015
  81,378,346
  81,378,703
  81,378,793
  81,378,868
  81,379,536
  81,379,674
  81,379,919
  81,379,964
  81,379,979
  81,380,241
  81,380,629
  81,381,052
  81,382,209
  81,382,797
  81,383,157
  81,386,043
  81,386,312
  81,386,765
  81,386,770
  81,387,601
  81,387,657
  81,387,749
  81,388,075
  81,388,682
  81,390,877
  81,391,171
  81,391,856
  81,392,707
  81,392,790
  81,396,878
  81,397,191
  81,399,835
  81,402,751
  81,402,880
  81,403,602
  81,403,831
  81,406,906
  81,407,491
  81,407,493
  81,410,136
  81,410,773
  81,411,106
  81,411,166
  81,411,535
  81,412,122
  81,412,890
  81,412,919
  81,413,284
  81,413,288
  81,415,508
  81,415,750
  81,415,767
  81,416,022
  81,416,181
  81,416,210
  81,417,428
  81,417,927
  81,417,935
  81,418,210
  81,418,239
  81,418,940
  81,418,949
  81,419,534
  81,420,037
  81,420,587
  81,420,845
  81,423,055
  81,424,201
  81,425,123
  81,425,880
  81,426,973
  81,427,017
  81,427,856
  81,429,537
  81,429,645
  81,429,739
  81,431,114
  81,431,340
  81,431,405
  81,431,520
  81,432,081
  81,432,590
  81,433,266
  81,433,295
  81,433,298
  81,433,301
  81,433,304
  81,433,307
  81,433,347
  81,433,700
  81,433,798
  81,434,335
  81,434,340
  81,434,495
  81,434,707
  81,434,904
  81,435,028
  81,435,342
  81,435,463
  81,435,778
  81,435,889
  81,435,927
  81,436,010
  81,436,341
  81,436,599
  81,436,626
  81,436,637
  81,442,478
  81,442,495
  81,442,591
  81,442,596
  81,442,765
  81,442,778
  81,442,809
  81,442,851
  81,443,128
  81,443,355
  81,443,572
  81,443,866
  81,444,090
  81,445,002
  81,445,100
  81,445,403
  81,445,622
  81,445,644
  81,446,272
  81,446,356
  81,446,642
  81,446,970
  81,447,035
  81,447,066
  81,447,096
  81,447,104
  81,447,105
  81,447,107
  81,447,109
  81,447,411
  81,447,468
  81,447,884
  81,448,201
  81,448,202
  81,448,376
  81,448,392
  81,448,490
  81,448,507
  81,448,850
  81,448,957
  81,449,138
  81,449,316
  81,449,468
  81,449,594
  81,449,599
  81,449,613
  81,449,615
  81,449,726
  81,450,228
  81,450,298
  81,450,461
  81,450,466
  81,450,604
  81,453,200
  81,453,274
  81,453,479
  81,453,504
  81,453,514
  81,454,149
  81,454,383
  81,454,418
  81,454,432
  81,454,434
  81,454,461
  81,455,350
  81,455,837
  81,455,867
  81,455,965
  81,456,731
  81,456,797
  81,457,474
  81,457,968
  81,458,491
  81,458,556
  81,461,901
  81,462,933
  81,463,101
  81,463,187
  81,463,194
  81,463,367
  81,466,139
  81,468,478
  81,468,494
  81,470,271
  81,471,290
  81,471,350
  81,472,823
  81,475,417
  81,475,977
  81,476,057
  81,476,440
  81,476,467
  81,476,591
  81,476,913
  81,476,914
  81,477,469
  81,477,965
  81,478,030
  81,478,131
  81,478,526
  81,478,604
  81,478,657
  81,478,679
  81,478,697
  81,478,765
  81,479,032
  81,479,047
  81,479,181
  81,479,284
  81,479,536
  81,479,875
  81,480,278
  81,480,287
  81,480,296
  81,480,450
  81,480,470
  81,480,634
  81,481,273
  81,481,355
  81,481,484
  81,481,670
  81,482,316
  81,482,318
  81,483,035
  81,483,357
  81,483,427
  81,483,468
  81,484,287
  81,485,126
  81,485,324
  81,486,761
  81,488,164
  81,489,056
  81,489,390
  81,489,757
  81,490,557
  81,491,374
  81,491,800
  81,492,544
  81,492,549
  81,492,551
  81,493,446
  81,494,306
  81,494,469
  81,494,475
  81,495,724
  81,495,726
  81,497,745
  81,498,126
  81,498,888
  81,499,014
  81,499,038
  81,501,312
  81,501,313
  81,501,886
  81,502,724
  81,506,985
  81,507,906
  81,508,263
  81,509,100
  81,515,824
  81,519,648
  81,519,650
  81,531,691
  81,549,904
  81,550,438
  81,550,604
  81,552,123
  81,556,745
  81,556,941
  81,556,953
  81,557,033
  81,559,204
  81,559,209
  81,559,389
  81,563,969
  81,563,972
  81,564,780
  81,565,286
  81,565,291
  81,567,196
  81,568,797
C
-
2
-
A
-
2
C
A/G
2
-
2
-
C
C
T
-
5
5
T
T
G
T
A
G
T
3
A
C
T
2
-
G
-
-
-
G
-
4
-
TG/3
G
G
T
C/T
C
T/-
-
-
C
3
C
C
G
A
C
T
A
T
G
T
6
3
A
A
T
G
A
-
T
-
G
G
-
G
G
C
G
-
A
G
6/-
5
C/13
C/T
A
2
A
A
G
C
G
6
-
3
C
3
T
C
G
-
5
G
G
G
T
T/C
C/T
C
A
T
G
-
9
-
T
T
2
3
-
C
C
C
G
2
9
A
A
-
A
T
A
CT/6
G
T
5
C
T
-
-
-
C
A
C
-
T
T/C
G
2
A
-
G
G
C
T
T
C
C
G
A
G
A
T
A
A
-
C
A
C/-
T
T
T
A/G
C
G
C
A
-
G
C/-
C
G
T
3
G
T
T
-
G
5
G
-
T
G
-
-
-
T
A
G
T
C/G
C/G
C
G
A
T
A
T
G/C
A/-
A
A
-
T
G
A
T
C
-
G
T
-
G/A
T
A
A
-
3
A
G
A/-
A
12/-
G
C
G
G
-
A
C
2
C
T
G
-
-
C
C
C
C
C
A
A
A
G
T
T
C
A
G
C/3
G
2
C
A
T
G
A
A
G
C
G
C
T
C
9
G
A
A
C
A
T
T
T
A
A
T
G
A
-
C
G
-
-
6
-
-
-
6
G
G
T
T
G
C
G
C
G
G
2
C
A
A
T/3
A/G
10
A/-
G
C
A
C
T
C
A
G
C
10/-
A/3
G/A
A
G
7
3
C/T
A
G
A
C
G/A
G
-
T
G
C
G
C
C
T
A
G
C
9
A/G
C
G
A
-
G
T
T
-
G
T
G
G
A
T
C
G
A
2
-
-
-
T
T
C
G
G
G
T
2
T/-
12/-
G
T
C
-
A
-
C/2
3
G/A
C
2
G
-
A
T
G
A
G
-
G
T
G
G
2
C/-
A
A
A
T
3
3
4/-
2/-
C
T
T
G
G
5/-
4/-
C
T
-/CA
T
G
A
2/-
4/-
2/-
-
C
2
-
A
A/2
A/T
C/T
T/G
G/T
C/T
2
A
A
2
2
-
-
A/9