Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 71,575 (bp)   Positions: 91
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
GK/Ox (KNAW) 
.001
.0
--
.086
.083
.013
.129
--
.006
--
.188
.01
--
--
.004
.021
--
--
--
--
--
.001
--
--
--
--
--
--
.086
.314
--
.117
.121
.028
--
--
--
.002
.002
.014
.002
.006
.013
--
.011
.017
.002
.037
.125
.009
.367
.007
.995
.059
--
--
--
--
.056
.001
--
.003
--
.015
.029
.001
.002
.015
.018
.085
.028
.0
.078
.998
.0
.001
.089
.013
.005
.097
--
--
.004
.01
--
.0
.003
.036
.048
.001
.003
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
Kdm5b
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
T
16
A
T
T
C
T
C
A
A
T
T
A
G
A
G
A
T
T
A
T
2
G
A
T
G
A
A
C
2
C
G
T
T
T
7
T
G
C
T
C
C
A
A
T
6
8
T
2
A
T
6
G
T
A
T
A
T
A
A
4
A
A
C
G
G
T
C
A
A
C
T
A
G
C
C
C
C
3
T
G
A
C
2
T
A
C
G
C
C
  56,439,607
  56,439,608
  56,442,690
  56,444,176
  56,444,177
  56,446,639
  56,446,796
  56,448,711
  56,449,747
  56,449,829
  56,450,123
  56,451,292
  56,451,390
  56,451,490
  56,452,352
  56,452,420
  56,452,828
  56,452,915
  56,454,140
  56,454,335
  56,455,034
  56,456,144
  56,456,624
  56,457,225
  56,457,239
  56,460,103
  56,460,104
  56,460,133
  56,460,217
  56,461,122
  56,462,582
  56,463,368
  56,465,137
  56,467,390
  56,467,854
  56,467,911
  56,468,120
  56,468,898
  56,469,080
  56,469,861
  56,470,389
  56,471,614
  56,472,245
  56,472,715
  56,472,763
  56,473,056
  56,474,170
  56,474,358
  56,474,509
  56,475,139
  56,476,909
  56,477,039
  56,477,536
  56,477,816
  56,478,077
  56,478,080
  56,479,087
  56,479,325
  56,480,021
  56,481,376
  56,482,527
  56,483,683
  56,484,283
  56,486,048
  56,487,518
  56,487,560
  56,487,911
  56,488,552
  56,489,384
  56,489,942
  56,490,085
  56,490,242
  56,493,000
  56,493,889
  56,493,998
  56,495,206
  56,495,225
  56,496,664
  56,496,672
  56,496,844
  56,497,479
  56,497,511
  56,498,333
  56,499,836
  56,499,980
  56,500,178
  56,500,206
  56,503,620
  56,504,894
  56,506,961
  56,508,860
8
G
-
A/2
T/-
T/2
15
T/-
C/2
G
-
C
-
G
A
G
GT/8
17
A
8
-
-
-
A
A/-
C
A
T
2
2
2/-
T
GT/3
C
2
C
7/-
C
C
2
-
T
T
A/-
-
C
-
-
C
-
A/7
-
-
A
T/12
A/61
-
2
2
-
C
-
2
2
5
A
G/2
C
G
G
G
3
C
G
T
G
G
T
T
3/-
3
3
-
T
-
C
T
C/2
A
T
C/5