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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 175,046 (bp)   Positions: 479
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.0
.0
.0
.001
.01
.004
.089
.004
.087
.0
.0
.005
.0
.002
.074
.002
.0
.001
.001
.007
.005
.302
.377
.182
.063
.008
.0
.001
.103
.006
.735
.887
1.0
.003
.015
.002
.002
.0
.033
.002
.0
.127
.998
.656
.078
.068
.086
.02
.079
.072
.005
.303
.01
.206
.006
.283
.035
.072
--
--
--
--
--
--
--
.001
.021
.002
.029
.003
.001
.025
.017
.002
.005
.025
.0
.038
.06
.129
.076
.074
.026
.019
.022
.0
.017
.558
.118
.25
.008
.028
.124
.036
.005
.004
.179
.07
.002
.0
.021
.003
.002
.001
.011
.002
.492
.161
.045
.001
.057
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.003
.028
.001
.013
.012
.014
.016
.038
.051
.063
.021
.118
.071
.26
.276
.445
.278
.287
.001
.0
.0
.001
.025
.978
.07
.377
.019
.007
--
.013
.005
.061
.594
.001
.001
.005
.013
.023
.197
.091
.066
.533
.026
.002
.005
.0
.028
.001
.017
.047
.015
.003
.009
.004
.013
.032
.001
.0
.237
--
--
--
--
--
.012
.002
.029
.205
.143
.143
.02
--
--
--
.89
.902
.027
.229
.26
.112
--
.001
.501
.355
.004
.015
.049
.142
.005
.284
.005
.006
.0
.001
.032
.005
.181
.0
.001
.003
.021
.0
.198
.88
.374
.382
.021
.352
.005
.0
.128
.05
.664
.812
.001
.004
.0
.001
.0
.019
.0
.01
.004
.601
.015
.022
.024
.073
.0
.001
.002
.0
.001
.005
--
--
.017
.703
.253
.061
.107
.188
.118
.007
.16
.228
.019
.051
.032
.013
.049
.003
.08
.0
.006
--
--
--
--
.438
.02
.001
.618
.902
.005
.02
.037
.101
.19
.033
.35
.181
.305
.451
.132
.012
.128
.174
.068
.006
.052
.005
.001
.456
.003
.004
.0
.003
.001
.006
.025
.003
.035
.007
.007
.002
.002
.014
.053
.003
.009
.575
.399
.16
.0
.973
.002
.998
.0
.015
.019
.002
.0
.0
.046
.036
.013
.139
.006
.005
.001
--
--
.0
.0
.0
.023
.012
.054
.023
.073
.001
.053
.0
.007
.007
.025
.028
.132
.015
.0
.008
.006
.004
.005
.0
.0
.001
.036
.006
.0
.006
.001
.0
.004
.095
.03
.0
.0
.0
.001
.0
.0
.0
.0
.001
.015
.0
.032
.002
.003
.002
.322
.0
.0
.002
.172
.002
.002
.022
--
--
--
.058
.007
.002
.0
.015
.0
.001
.075
.0
.034
.001
.127
.007
.0
.997
.002
.014
.004
.005
.001
.97
.035
.005
.0
.0
.006
.011
.001
.01
.968
.012
.046
.115
.597
.004
.004
.006
.05
.073
.0
.001
.001
.013
.054
.006
.0
.0
.999
.151
.008
.002
.014
.001
.0
.879
.003
.014
.005
.242
.197
.47
.616
.002
.001
.01
.0
.001
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
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--
G
T
T
A
G
T
C
G
A
T
G
T
A
C
A
A
C
A
A
G
T
T
C
C
T
T
3
A
G
C
G
G
A
C
C
G
G
A
T
T
G
G
A
C
A
C
C
A
G
G
T
G
A
A
A
G
C
G
A
G
G
G
T
C
C
G
4
A
G
A
G
T
A
G
G
G
C
G
T
A
T
C
G
12
10
T
4
T
G
C
A
G
T
A
A
G
2
2
6
4
C
C
G
C
G
C
A
A
C
G
A
C
T
T
G
A
G
A
T
A
A
G
C
C
C
T
G
A
A
C
T
A
T
C
A
G
A
C
A
T
C
G
8
6
C
A
T
4
A
T
G
T
G
G
A
C
T
T
A
A
A
A
T
A
T
A
A
5
C
A
G
C
C
C
C
G
G
T
T
T
T
A
A
A
A
T
G
A
A
A
G
A
G
10
G
T
3
C
A
C
G
A
G
14
12
G
10
8
4
2
G
9
6
2
C
T
T
G
G
A
T
G
C
T
99
T
G
T
T
A
A
A
G
T
G
A
C
T
T
A
6
A
C
A
A
3
2
G
G
A
A
T
G
4
22
20
C
50
G
C
A
C
A
2
26
T
A
A
G
T
A
C
G
G
G
T
C
T
C
A
T
T
T
G
G
T
A
A
C
A
C
T
3
T
C
T
C
C
C
5
C
C
T
T
C
A
C
C
G
T
A
C
C
A
A
G
T
T
T
G
T
C
G
C
G
A
T
C
C
T
A
A
2
C
A
T
A
T
C
A
G
T
G
C
T
G
C
A
G
A
T
T
G
G
C
T
A
C
4
5
G
G
G
A
G
C
24
T
A
A
T
G
A
T
C
G
T
C
G
C
C
C
A
G
2
T
C
T
G
C
G
C
5
A
A
C
C
T
T
C
C
G
6
4
C
A
2
A
C
T
G
G
A
A
A
G
G
T
G
A
T
C
C
A
T
A
C
C
C
G
G
G
T
T
8
A
T
A
C
G
G
2
2
T
A
6
A
4
A
A
C
T
A
C
C
A
C
G
C
C
8
T
T
T
G
T
A
G
G
T
G
2
2
10
G
A
A
C
C
  30,406,571
  30,406,608
  30,406,618
  30,406,866
  30,409,132
  30,409,330
  30,409,432
  30,409,641
  30,409,676
  30,409,884
  30,410,017
  30,410,277
  30,410,294
  30,410,305
  30,410,570
  30,410,873
  30,410,912
  30,411,039
  30,411,041
  30,411,424
  30,411,515
  30,411,543
  30,411,582
  30,411,779
  30,411,825
  30,412,142
  30,412,294
  30,413,058
  30,413,140
  30,413,249
  30,413,762
  30,413,974
  30,414,030
  30,414,629
  30,414,954
  30,415,242
  30,415,403
  30,415,563
  30,415,577
  30,415,627
  30,416,029
  30,416,191
  30,416,229
  30,416,257
  30,416,896
  30,416,897
  30,417,060
  30,417,123
  30,417,148
  30,417,149
  30,417,238
  30,417,430
  30,417,614
  30,417,660
  30,417,729
  30,418,028
  30,418,443
  30,418,673
  30,418,831
  30,418,843
  30,418,847
  30,418,851
  30,418,870
  30,418,876
  30,418,882
  30,420,718
  30,421,034
  30,421,091
  30,421,115
  30,421,631
  30,421,659
  30,422,508
  30,422,586
  30,422,925
  30,422,960
  30,423,005
  30,423,026
  30,423,384
  30,423,414
  30,423,434
  30,423,758
  30,423,795
  30,424,076
  30,424,723
  30,424,725
  30,424,939
  30,425,579
  30,425,743
  30,425,835
  30,425,916
  30,426,076
  30,426,090
  30,426,571
  30,426,682
  30,427,002
  30,427,013
  30,427,056
  30,427,112
  30,427,123
  30,427,125
  30,427,491
  30,430,869
  30,430,878
  30,431,127
  30,431,618
  30,432,275
  30,432,552
  30,432,650
  30,432,801
  30,432,812
  30,432,879
  30,433,443
  30,433,463
  30,433,496
  30,433,585
  30,433,590
  30,433,647
  30,433,677
  30,433,690
  30,433,697
  30,433,719
  30,433,759
  30,433,786
  30,433,791
  30,433,802
  30,433,809
  30,433,866
  30,433,869
  30,433,976
  30,434,047
  30,434,086
  30,434,163
  30,434,195
  30,434,206
  30,434,635
  30,434,636
  30,434,646
  30,434,648
  30,434,656
  30,434,690
  30,434,859
  30,435,514
  30,435,737
  30,435,739
  30,436,402
  30,436,405
  30,436,408
  30,436,710
  30,436,715
  30,436,717
  30,439,242
  30,440,837
  30,442,602
  30,445,652
  30,446,369
  30,446,492
  30,446,512
  30,448,242
  30,448,990
  30,449,161
  30,449,362
  30,450,988
  30,451,070
  30,452,183
  30,452,345
  30,452,512
  30,453,457
  30,453,690
  30,453,982
  30,456,355
  30,456,860
  30,458,313
  30,458,565
  30,458,600
  30,458,863
  30,459,246
  30,459,569
  30,460,089
  30,460,111
  30,460,692
  30,460,856
  30,461,001
  30,461,825
  30,461,931
  30,462,119
  30,462,578
  30,462,821
  30,462,863
  30,463,200
  30,463,242
  30,463,250
  30,463,260
  30,463,294
  30,463,457
  30,465,622
  30,466,070
  30,466,074
  30,467,368
  30,468,646
  30,469,462
  30,472,266
  30,472,325
  30,472,363
  30,476,215
  30,476,217
  30,479,564
  30,479,887
  30,479,889
  30,480,760
  30,482,418
  30,483,948
  30,484,682
  30,484,685
  30,485,501
  30,487,606
  30,489,477
  30,489,513
  30,489,770
  30,489,979
  30,490,096
  30,490,350
  30,492,196
  30,492,604
  30,492,632
  30,492,666
  30,492,898
  30,493,214
  30,493,353
  30,493,492
  30,494,514
  30,494,804
  30,496,387
  30,497,394
  30,497,825
  30,497,826
  30,497,993
  30,498,383
  30,498,975
  30,499,334
  30,502,369
  30,502,446
  30,502,583
  30,502,829
  30,506,183
  30,508,394
  30,508,688
  30,508,689
  30,509,098
  30,509,315
  30,511,189
  30,511,444
  30,511,719
  30,512,006
  30,512,347
  30,512,366
  30,512,368
  30,513,671
  30,513,889
  30,514,525
  30,514,850
  30,514,893
  30,514,894
  30,514,956
  30,515,147
  30,515,152
  30,515,265
  30,517,256
  30,517,381
  30,517,743
  30,519,248
  30,519,255
  30,519,312
  30,519,324
  30,519,769
  30,519,771
  30,519,942
  30,520,450
  30,520,520
  30,520,578
  30,520,592
  30,520,958
  30,521,441
  30,522,542
  30,522,565
  30,522,879
  30,522,884
  30,522,888
  30,522,900
  30,523,049
  30,523,270
  30,523,365
  30,523,883
  30,523,993
  30,526,754
  30,527,313
  30,527,448
  30,527,460
  30,527,486
  30,527,903
  30,528,017
  30,528,393
  30,528,611
  30,528,977
  30,529,319
  30,529,549
  30,529,998
  30,530,660
  30,530,674
  30,530,739
  30,530,825
  30,531,011
  30,531,167
  30,531,582
  30,531,660
  30,531,671
  30,531,685
  30,532,018
  30,532,211
  30,532,218
  30,532,321
  30,532,568
  30,532,680
  30,532,749
  30,532,752
  30,532,774
  30,532,794
  30,533,169
  30,533,289
  30,533,298
  30,533,315
  30,533,917
  30,534,004
  30,534,417
  30,534,627
  30,534,752
  30,535,453
  30,536,447
  30,536,619
  30,536,675
  30,536,861
  30,537,385
  30,537,404
  30,537,405
  30,537,680
  30,537,689
  30,537,861
  30,537,883
  30,537,954
  30,537,986
  30,538,495
  30,538,684
  30,538,800
  30,538,954
  30,538,955
  30,539,043
  30,539,063
  30,539,302
  30,539,892
  30,539,937
  30,539,953
  30,540,018
  30,540,181
  30,540,205
  30,540,222
  30,540,287
  30,540,294
  30,540,348
  30,540,619
  30,541,123
  30,541,206
  30,541,427
  30,541,972
  30,542,085
  30,542,852
  30,542,883
  30,542,917
  30,542,983
  30,542,995
  30,543,600
  30,544,059
  30,544,191
  30,544,261
  30,544,329
  30,544,351
  30,544,753
  30,545,106
  30,545,909
  30,546,403
  30,547,710
  30,548,231
  30,548,468
  30,548,473
  30,548,731
  30,549,500
  30,549,829
  30,549,877
  30,550,138
  30,550,353
  30,550,524
  30,550,562
  30,551,036
  30,551,047
  30,551,164
  30,551,166
  30,551,439
  30,551,519
  30,551,522
  30,551,524
  30,551,531
  30,551,836
  30,551,924
  30,551,925
  30,552,107
  30,552,430
  30,552,544
  30,553,203
  30,553,922
  30,554,090
  30,554,712
  30,554,924
  30,555,198
  30,555,217
  30,555,286
  30,555,482
  30,555,715
  30,556,511
  30,557,525
  30,557,693
  30,558,058
  30,558,195
  30,559,021
  30,559,211
  30,560,547
  30,561,144
  30,561,713
  30,561,816
  30,561,881
  30,561,921
  30,562,881
  30,563,590
  30,565,487
  30,565,607
  30,565,661
  30,566,250
  30,570,191
  30,570,296
  30,571,304
  30,571,507
  30,571,522
  30,571,556
  30,571,699
  30,571,718
  30,571,911
  30,572,174
  30,572,188
  30,572,193
  30,572,226
  30,572,360
  30,572,487
  30,572,597
  30,573,404
  30,573,469
  30,573,491
  30,573,541
  30,574,669
  30,574,762
  30,574,922
  30,575,450
  30,575,995
  30,576,382
  30,576,996
  30,578,766
  30,578,806
  30,578,810
  30,581,337
  30,581,341
  30,581,346
  30,581,358
  30,581,389
C
C
C
G
A
-
T
A
C
C
A
C
G
T
G
G
T
2
4
C
C
T/3
T
2
G
G
-
T
2
T
A
A
C
T
T
A
A
G
-
11/3
A
T
C
T
G
T
A
G
A
A
C
C
G
G
C
A
T
T
3
A
A
A
2
3
10
C
-
G
A
G
A
C
G
A
T
-
T
A
C
G
5
T
A
12/-
-
C
-
5/7
A
T
-
2
-
G
C
C
-
-
6/-
4/-
T
T
A
2
T
T
G
C
T
A
C
A
C
C
2
G
T
G
G
G
G
T
T
T
T
G
A
C
G
-
C
G
C
T
C
A
G
T
G
C
A
A
8/-
-
2
T
-
-
C
C
T
A
A
A
C
T
-
C
G
C
2
T
C
T
C
2
G
-
T
G
A
T
T
T
A
A
T
C
G
C
C
T
G
G
-
C
T
C
6
G
A
G
T
-
5
-
-
5/3
G
2
G/2
A/G
2
14/-
12/-
C
10/-
8/-
-
-
15
-
6/-
-
T
C
C
A
A
G
C
T
T
3
-
C
C
C
A
G
3
G
G/2
A
A
AT/3
T
C
C
G
-
G
G
-
G
3/-
2/-
A
-
G
3
G
A
-
22/-
20/-
G
50/-
A
T
G
T
T
2/-
26/-
13/11
G
C
T
-
T
-
-
G/13
G/11
C
T
C
G
G
G
C
G
A
T
C
T
C
5
G
G
A
-
C
T
C
2
21
G
-
T
T
C
C
T
G
2
T
T
A
G
T
T
G
T
T
G
2
2
A
C
T
C
A
A
G
4/5
T
T
C
G
G
-
3
C
A
G
-
T
G
T
C
A
T
C
A
T
G
A
G
C
C
A
A
T
C
G
T
-
-
C
7/9
C
G
A
T
-
21
G
T
A
T
T
C
A
A
C
G
T
T
T
2
G
C
-
C
T
C
A
T
A
T
-
G
G
T
G
17
A
T
T
C
6/-
-
A
8
-
C
T
G
2
4
C
G
G
A
C
C
2
G
C
T
T
-
G
G
T
T
T
T
C
C
-
C
-
T
C
G
T
A
A
2/-
2/-
C
2
6/-
C
-
T
G
4
C
G
A
A
C
T
A
T
2
-
17
G
C
A
C
G
A
A
C
A
-
-
-
A
14
G
T
T