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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 67,591 (bp)   Positions: 627
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (MCW) 
.001
.018
.381
.001
.0
.0
.022
.0
.022
.0
.003
.032
.003
.003
.003
.003
.01
.002
.0
.459
.0
.998
.368
.0
.036
.004
.008
.01
.001
.001
.008
--
--
--
--
--
--
.056
.079
.084
.095
.032
.138
.049
.008
.01
.016
.116
.036
.001
.007
.008
.012
.005
.485
.004
.011
.469
.992
.06
.005
.013
.0
.067
.011
.0
.0
.001
.074
.008
.06
.253
.068
.003
.438
.579
--
.001
.014
.061
.001
.0
.0
.988
.965
.92
.001
.001
--
.606
.0
.98
.343
.808
.057
.003
.004
.0
.002
.001
.0
.0
.001
.016
.002
.005
.001
.001
.006
.001
.008
.003
.002
.003
.014
.004
.006
.013
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.077
.069
.097
.2
.009
.0
.0
.004
.0
.0
.01
.412
.057
.029
.001
.0
.001
.01
.0
.0
.002
.0
.002
.129
.576
.027
.197
.262
.311
--
--
--
.152
.064
.044
.0
.001
.002
.001
.001
.009
.001
.0
.0
.001
.935
--
.001
.003
.002
.001
.008
.006
.005
.0
.0
.02
.002
.004
.0
.0
.276
.0
.08
.0
.588
.001
.001
.107
.199
.198
.024
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.005
.427
.006
.242
.018
.051
.027
.01
.01
.003
.001
.0
.025
.037
.096
.909
.166
.001
.413
.004
.007
.002
.006
.002
.302
.0
.169
.009
.088
.199
.029
.832
.666
.641
.526
.0
.0
.0
.0
.001
.008
.007
.0
.0
.0
.006
.001
.039
.003
.001
.005
--
--
--
.267
--
--
.012
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.014
.007
.312
.015
.263
.256
.06
.001
.0
.025
.001
.047
.063
.152
.159
.161
.016
.005
.044
.01
.017
.012
.033
.016
.005
.013
.001
.003
.012
.38
.759
.326
.019
.002
.009
.002
.004
.002
.001
.011
.015
.008
.002
.002
.008
.0
.0
.0
.007
.0
.0
.001
.014
.002
.004
.002
.262
.082
.017
.081
.009
.003
.022
.001
.555
.002
.001
.006
.01
.047
.07
.01
.001
.299
.489
.095
.075
.006
.0
.0
.041
.001
.0
.002
.002
.007
.0
.008
.002
.001
.001
.016
.002
.005
.04
.007
--
--
.161
.0
.073
.011
.008
.017
.003
.001
.001
.001
.85
.562
.294
.301
.069
.109
.369
.183
.158
.006
.274
.005
.009
.335
.556
.601
.012
.018
.004
.246
.004
.002
.003
.98
.808
--
--
--
--
--
--
.0
.0
.001
.021
.067
.001
.228
.149
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.006
.008
.053
.006
.008
.008
.575
.001
.011
.004
.008
.001
.023
.008
.077
.289
.044
.05
.19
.071
.352
.015
.0
.001
.001
.062
.183
.006
.456
.023
.004
.004
.067
.029
.123
.493
.011
.02
--
--
--
--
.029
.002
.863
.022
.007
.038
.006
.001
.0
.0
.007
.997
.001
.001
.004
.0
.006
.0
.019
--
--
--
--
--
--
--
--
--
.042
.008
.662
.966
.885
.118
.043
.11
.149
.016
.001
.062
.0
.0
.003
.006
.015
.001
1.0
.086
.001
.0
.0
.001
.006
.015
.002
.04
.039
.001
.055
.005
.001
.005
.045
.15
.074
.491
.09
--
--
--
--
--
.016
.083
--
--
--
--
--
--
--
--
--
--
--
.031
.001
.007
.043
.014
.005
.019
.0
.0
.418
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
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--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
Crb1
G
A
G
G
C
C
C
C
G
C
T
G
G
G
24
A
4
G
2
G
C
T
G
T
T
A
A
G
A
C
G
C
T
T
G
C
G
4
A
2
A
A
G
A
T
A
G
T
G
5
G
T
2
A
T
2
G
T
C
6
T
C
T
A
A
A
T
G
G
T
A
G
T
C
T
A
A
G
A
7
A
G
C
C
A
C
G
G
G
G
G
G
G
A
G
G
C
C
A
C
C
G
G
C
C
T
C
3
T
G
G
C
G
A
G
C
G
C
C
T
C
C
T
G
A
G
G
C
C
G
A
G
T
T
T
A
A
G
T
T
C
T
G
C
A
G
2
T
T
A
C
A
C
C
A
A
G
T
C
A
G
T
C
A
T
T
A
A
G
C
A
T
C
C
C
A
A
4
A
G
T
T
G
C
T
G
T
T
C
A
C
T
C
C
9
A
C
T
3
G
C
4
4
T
A
C
A
C
T
A
G
T
T
G
A
T
T
T
G
C
A
A
T
A
C
T
G
C
C
C
G
C
C
A
C
2
A
C
T
G
C
G
G
T
A
T
T
A
T
A
A
T
C
G
T
T
C
C
A
G
G
C
C
C
A
A
G
C
T
C
A
A
A
G
C
C
20
C
4
C
G
C
C
A
C
T
G
C
C
C
T
G
A
G
C
G
C
T
G
T
C
T
G
T
C
T
C
G
C
C
C
A
C
G
C
G
A
T
C
A
G
T
C
T
G
A
A
C
T
T
C
T
G
T
C
A
G
2
A
C
C
G
C
A
T
T
T
T
T
G
G
A
A
A
G
T
T
C
G
C
A
A
A
T
G
T
T
T
G
A
A
G
C
C
C
C
T
2
2
G
A
C
G
G
A
C
A
G
T
A
G
T
A
G
G
G
G
A
A
T
A
T
T
G
T
A
T
C
G
C
T
2
A
T
G
G
C
A
C
C
T
A
A
A
T
G
A
T
A
A
T
C
C
2
C
T
C
C
T
T
A
8
G
T
A
C
T
C
C
T
T
A
C
T
A
G
G
T
A
T
G
C
G
T
C
C
T
G
C
G
A
G
A
T
A
A
9
T
T
A
T
G
A
A
A
T
T
T
A
G
A
G
T
C
C
A
A
C
C
A
A
A
A
T
G
C
T
G
A
C
G
A
G
C
A
G
T
G
2
G
A
T
G
G
A
A
A
T
C
G
A
C
T
T
C
C
G
G
G
T
A
G
T
C
A
G
A
A
G
A
4
G
G
C
T
C
G
A
A
A
A
C
T
T
G
T
T
C
C
T
T
T
A
T
A
G
C
G
T
A
A
3
T
G
A
G
C
G
G
G
A
C
A
C
G
G
C
G
C
C
T
C
T
A
T
C
A
C
C
C
A
A
T
8
T
T
T
A
A
C
T
A
T
T
G
T
5
  61,292,837
  61,294,045
  61,295,068
  61,295,607
  61,295,700
  61,295,732
  61,295,866
  61,296,663
  61,296,949
  61,297,900
  61,298,048
  61,298,255
  61,298,281
  61,298,504
  61,299,279
  61,299,460
  61,299,817
  61,299,820
  61,299,825
  61,300,656
  61,300,703
  61,302,842
  61,303,120
  61,303,428
  61,303,560
  61,303,991
  61,305,310
  61,306,496
  61,308,088
  61,308,593
  61,309,609
  61,311,904
  61,312,148
  61,312,167
  61,312,973
  61,313,010
  61,314,044
  61,315,674
  61,315,677
  61,315,678
  61,315,680
  61,320,671
  61,321,008
  61,321,345
  61,321,757
  61,323,322
  61,323,782
  61,325,030
  61,326,424
  61,326,569
  61,326,573
  61,326,714
  61,327,975
  61,328,289
  61,328,671
  61,330,016
  61,331,013
  61,332,794
  61,333,005
  61,333,513
  61,334,001
  61,334,240
  61,334,602
  61,334,696
  61,335,742
  61,336,613
  61,337,181
  61,337,197
  61,337,985
  61,338,395
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  61,339,854
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  61,340,799
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  61,341,746
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  61,347,341
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  61,347,629
  61,347,702
  61,347,717
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  61,347,793
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  61,347,803
  61,347,819
  61,347,836
  61,347,866
  61,347,868
  61,347,890
  61,347,898
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  61,347,946
  61,347,976
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  61,348,962
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  61,349,069
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  61,349,402
  61,349,536
  61,349,546
  61,349,551
  61,349,567
  61,349,603
  61,349,639
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  61,349,712
  61,349,873
  61,350,174
  61,350,189
  61,350,200
  61,350,207
  61,350,250
  61,350,308
  61,350,400
  61,350,475
  61,350,533
  61,350,582
  61,350,583
  61,350,588
  61,350,663
  61,350,669
  61,350,776
  61,350,840
  61,350,936
  61,350,971
  61,351,096
  61,351,229
  61,351,234
  61,351,237
  61,351,310
  61,351,522
  61,351,579
  61,351,744
  61,351,919
  61,351,922
  61,352,055
  61,352,056
  61,352,065
  61,352,235
  61,352,272
  61,352,284
  61,352,290
  61,352,294
  61,352,442
  61,352,467
  61,352,482
  61,352,512
  61,352,543
  61,352,788
  61,352,792
  61,352,886
  61,353,001
  61,353,057
  61,353,106
  61,353,120
  61,353,123
  61,353,236
  61,353,370
  61,353,410
  61,353,500
  61,353,527
  61,353,655
  61,353,684
  61,353,720
  61,353,725
  61,353,828
  61,353,844
  61,353,936
  61,353,976
  61,353,982
  61,354,071
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  61,354,291
  61,354,299
  61,354,317
  61,354,334
  61,354,560
  61,354,772
  61,354,811
  61,354,865
  61,354,917
  61,354,922
  61,355,081
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  61,355,306
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  61,355,527
  61,355,530
  61,355,556
  61,355,561
  61,355,645
  61,355,649
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  61,355,712
  61,355,839
  61,355,900
  61,355,904
  61,355,911
  61,355,945
  61,355,964
  61,355,986
  61,356,103
  61,356,162
  61,356,230
  61,356,234
  61,356,246
  61,356,279
  61,356,307
  61,356,322
  61,356,463
  61,356,750
  61,356,817
  61,357,050
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  61,357,489
  61,357,536
  61,357,607
  61,357,664
  61,357,763
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  61,358,227
  61,358,237
  61,358,262
  61,358,265
  61,358,383
  61,358,400
  61,358,513
  61,358,877
  61,359,042
  61,359,624
  61,359,901
  61,359,983
  61,360,261
  61,360,311
  61,360,428
  61,360,559
  61,360,757
  61,360,848
  61,360,878
  61,360,966
  61,361,083
  61,361,185
  61,361,200
  61,361,201
  61,361,448
  61,361,540
  61,361,551
  61,361,552
  61,361,639
  61,361,705
  61,361,888
  61,361,889
  61,361,974
  61,362,094
  61,362,228
  61,362,269
  61,362,621
  61,362,664
  61,362,738
  61,362,740
  61,362,743
  61,362,937
  61,362,952
  61,362,966
  61,362,997
  61,363,196
  61,363,262
  61,363,638
  61,363,766
  61,363,843
  61,363,880
  61,363,889
  61,364,005
  61,364,011
  61,364,014
  61,364,027
  61,364,036
  61,364,040
  61,364,054
  61,364,166
  61,364,282
  61,364,419
  61,364,606
  61,364,657
  61,364,719
  61,364,764
  61,364,769
  61,364,884
  61,364,919
  61,364,975
  61,365,069
  61,365,160
  61,365,269
  61,365,294
  61,365,502
  61,365,579
  61,365,586
  61,365,607
  61,365,996
  61,366,016
  61,366,017
  61,366,033
  61,366,037
  61,366,043
  61,366,275
  61,366,463
  61,366,518
  61,366,569
  61,366,620
  61,366,622
  61,366,685
  61,366,754
  61,366,772
  61,366,870
  61,366,907
  61,366,967
  61,367,020
  61,367,052
  61,367,075
  61,367,114
  61,367,192
  61,367,273
  61,367,437
  61,367,561
  61,367,873
  61,367,938
  61,368,243
  61,368,351
  61,368,372
  61,368,411
  61,368,604
  61,368,606
  61,368,608
  61,368,666
  61,368,698
  61,368,700
  61,368,762
  61,368,781
  61,368,782
  61,368,860
  61,369,021
  61,369,118
  61,369,228
  61,369,232
  61,413,394
  61,413,436
  61,413,605
  61,413,659
  61,413,732
  61,413,960
  61,414,199
  61,414,250
  61,414,416
  61,415,246
  61,415,248
  61,415,394
  61,415,417
  61,415,594
  61,415,602
  61,415,628
  61,415,707
  61,415,772
  61,415,883
  61,415,933
  61,416,337
  61,416,411
  61,416,669
  61,416,836
  61,416,871
  61,417,023
  61,417,163
  61,417,270
  61,422,475
  61,422,537
  61,422,762
  61,423,099
  61,423,518
  61,423,873
  61,423,878
  61,423,898
  61,424,054
  61,424,192
  61,424,254
  61,424,282
  61,424,393
  61,424,476
  61,424,732
  61,424,943
  61,425,226
  61,425,483
  61,425,486
  61,425,494
  61,425,529
  61,425,721
  61,426,528
  61,426,648
  61,426,855
  61,426,890
  61,426,990
  61,426,997
  61,427,039
  61,427,040
  61,427,057
  61,427,071
  61,427,074
  61,427,124
  61,429,191
  61,429,619
  61,429,642
  61,429,868
  61,430,290
  61,430,294
  61,430,511
  61,431,305
  61,431,467
  61,432,397
  61,432,514
  61,432,535
  61,432,543
  61,432,740
  61,432,754
  61,432,800
  61,433,014
  61,433,031
  61,433,040
  61,433,041
  61,433,143
  61,433,423
  61,433,519
  61,433,946
  61,434,022
  61,434,074
  61,434,140
  61,434,191
  61,434,249
  61,434,280
  61,434,532
  61,434,621
  61,434,748
  61,434,896
  61,434,956
  61,435,120
  61,435,181
  61,435,216
  61,435,272
  61,435,331
  61,435,462
  61,435,638
  61,435,649
  61,435,680
  61,435,710
  61,435,728
  61,435,752
  61,435,775
  61,435,783
  61,435,788
  61,435,802
  61,435,849
  61,435,924
  61,435,938
  61,436,085
  61,436,195
  61,436,204
  61,436,236
  61,436,250
  61,436,267
  61,436,305
  61,436,378
  61,436,481
  61,437,078
  61,437,169
  61,437,219
  61,437,223
  61,437,359
  61,437,385
  61,437,444
  61,437,567
  61,437,570
  61,437,606
  61,437,706
  61,437,710
  61,437,832
  61,437,872
  61,437,953
  61,437,968
  61,438,010
  61,438,154
  61,438,181
  61,438,352
  61,438,377
  61,438,451
  61,438,856
  61,438,974
  61,439,132
  61,439,284
  61,439,505
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  61,446,696
  61,447,016
  61,447,351
  61,447,947
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  61,451,215
  61,451,217
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  61,453,488
  61,453,498
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  61,453,605
  61,453,622
  61,453,656
  61,453,662
  61,453,699
  61,453,731
  61,453,827
  61,453,846
  61,453,858
  61,454,015
  61,454,125
  61,454,151
  61,454,207
  61,454,302
  61,454,527
  61,454,674
  61,454,708
  61,455,018
  61,455,092
  61,455,369
  61,455,643
  61,456,304
  61,456,646
  61,456,754
  61,456,915
  61,457,467
  61,457,600
  61,457,891
  61,458,169
  61,458,191
  61,458,238
  61,458,254
  61,458,320
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  61,459,842
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  61,460,176
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  61,461,102
  61,461,273
  61,463,892
  61,463,896
  61,463,909
  61,463,937
  61,465,325
  61,465,829
  61,467,398
  61,470,799
  61,470,835
  61,470,923
  61,471,043
  61,472,766
  61,474,414
  61,474,509
  61,475,036
  61,475,150
  61,475,188
  61,475,192
  61,475,234
  61,476,911
  61,477,130
  61,477,628
  61,477,763
  61,478,553
  61,478,817
  61,479,289
  61,479,766
  61,480,128
  61,480,392
T
C
G/A
A
2
2
2
T
A
A
G
C
C
C
-
G
-
GT/-
-
A
T
C
A
G
C
G
-
A
G
T
2
A
C
G
A
2
A
-
A/3
2/-
T
C
G/A
G
A
10
T
2
3
-
-
C
-
G
2
2/-
2
-
T
-
C
T
C
C
G
-
A
A
T
C
G
C
G
T
C
-
-
A
5
-
G
A
G
T
G
T
T
2
-
4
T
A
A
T
A
A
T
T
G
G
T
A
A
G
A
2
5
3/-
2
A
A
T
A
G
A
T
A
T
T
3
G
G
C
A
G
T
C
G
A
T
G
A
G
C
C
-
C
A
C
C
T
C
A
A
G
C
-
C
C
G
T
G
2
3
G
C
C
C
2
G
14
7
T
G
C
A
G
G
A
3
G
G
A
9
3
A/4
A/G
-
G
-
C
A
C
G
C
A
C
G
G
C
G
C
G
T
9/-
2
-
3
-
A
A
-
-
C
C
A
G
T
A
T
A
C
G
A
G
A
C
C
7
G
T
G
C
G
T
C
A
T
T
T
C
A
T
A/5
C/T
-
5/7
G
C
T
T
-
A
A
G
C
G
G
C
G
G
C
T
A
A
G
2
T
7
G/A
-
A
T
G
T
G
A
T
-
T
T
G
G
A
T
T
20/-
CA/-
4/-
2
A
A
A
G
A
C
A
T
T
G
-
C
G
A
T
A
A
C
A
2
T
C
A
T/C
C/A
T/C
C/A
A
C/T
2
C/T
A/G
4
A
C/A
A
A/T
T/G
T
C
C
C
-
C
A
-
C
T
C
G
T
C
A
C
T/3
A/-
G/-
-
3
A
T
A
G
G
A
G
C
C
C
T
6
T
10
2
A
C
C
T
A
T
C
T
G
8
A
T/C
T/C
C
A
G
G
A
A
T
2
T
3
-
-
A
G
G
A
A
T
T
G
T
C
T
A
C
G
A
A
A
A
G
-
A
T
C
A
A
G
G
C
T
A
T
C
2/-
3
3
T
A
11
G
A
T
C
C
C
G
C
A
2
A
G
G
A
2
T
-
3/T
13
C/T
C/A
A
A
G
-
A
C
G
A
2
T
T
C
T/4
G
T
2
C
T
G/A
C
C
C
A
T
T
C
T
2
C
A
A
C
G
2
G
C
2
G
-
3/5
11
G
C
A
G
G
G
C
G
C
T
A
G
C
C
A
A
G
G
T
G
G
G
C
G
C
2
A
C
3
T
T
T
G
A
T
G
T
C
A
-
A
G
G
C
A
C
G
G
A
A
15
G
T
C
C
T
C/T
A
3
A
C
G
A
A
T
C
T
G
G
T
A/G
4/-
G/A
G/C
C/T
T/G
G
G/A
A/C
A/G
-
G
T
T/-
C
T
2
-
A
T
C
C
G
G
TG/3
G
T
A
A
C
G
-
-
C
T
T
A
T
A
A
A
3
T
C
A
A
T
T
A
C/T
C/T
T/C
C/2
G
G
C
A
G
T
T
T
T
T
2
-
T/C
T/C
C
5
T
T
C
G
14
G
A
3
-