Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 28,276 (bp)   Positions: 170
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/EurMcwi (MCW) 
.014
.442
.52
.186
.066
.023
.008
.029
.86
.045
.019
.007
.005
.094
.161
.74
.772
.0
.029
.476
.013
--
--
--
--
.032
.026
.084
.064
.227
.005
--
--
.045
.011
.008
.679
.532
.16
.103
.082
.094
.011
.005
.005
.037
.029
.992
.007
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.037
.018
.047
.09
.102
.009
.007
.013
.034
.371
.006
.031
.023
.005
.012
.146
.094
.119
.005
.186
.009
.027
.487
.357
.008
.082
.488
.561
.279
.286
.506
.352
.003
.17
--
--
--
--
--
--
--
--
.01
.009
.04
.001
.007
.028
.001
.007
.001
.002
.059
.001
.001
.033
.012
.066
.085
.062
.015
.005
.002
.015
.002
.0
.003
.114
.022
--
--
.116
.048
.325
.002
.274
.049
.005
.003
.083
.021
.001
.031
.025
--
.021
.005
.001
.041
.271
.057
.0
.96
.072
.025
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
Bcat1
G
A
A
T
18
A
T
A
G
A
4
2
A
T
C
C
C
A
2
A
18
A
2
G
A
G
T
G
10
A
A
3
C
T
G
T
C
T
C
T
6
4
4
G
2
4
G
A
2
G
G
G
A
C
A
C
C
G
C
36
A
C
G
A
T
4
T
G
T
G
G
G
T
T
A
2
T
G
C
T
C
T
G
G
T
G
A
C
T
C
C
A
G
A
T
A
T
G
T
A
G
G
T
C
T
T
T
A
A
G
T
T
T
G
A
T
A
A
T
C
T
T
G
C
T
A
G
C
C
T
A
A
C
A
G
C
2
C
C
C
T
A
T
C
A
A
T
G
G
T
T
A
G
T
G
A
T
A
G
A
C
C
G
A
G
A
C
A
G
C
  243,445,828
  243,447,044
  243,447,056
  243,449,080
  243,451,513
  243,452,427
  243,452,652
  243,453,038
  243,453,185
  243,454,412
  243,454,415
  243,454,472
  243,454,567
  243,455,574
  243,456,049
  243,456,062
  243,456,066
  243,457,598
  243,457,708
  243,457,778
  243,458,201
  243,459,414
  243,459,430
  243,459,452
  243,459,457
  243,460,435
  243,463,802
  243,464,374
  243,465,422
  243,465,575
  243,467,854
  243,468,656
  243,468,701
  243,468,972
  243,469,119
  243,472,216
  243,472,823
  243,472,911
  243,472,918
  243,473,561
  243,473,831
  243,473,833
  243,473,873
  243,473,876
  243,473,877
  243,473,899
  243,473,902
  243,476,172
  243,476,269
  243,476,276
  243,476,339
  243,476,355
  243,476,358
  243,476,529
  243,476,535
  243,476,727
  243,476,750
  243,476,789
  243,476,866
  243,476,900
  243,476,934
  243,477,030
  243,477,035
  243,477,330
  243,477,515
  243,477,543
  243,477,551
  243,477,553
  243,477,555
  243,477,668
  243,477,692
  243,477,708
  243,477,743
  243,477,780
  243,477,800
  243,477,908
  243,477,929
  243,478,015
  243,478,043
  243,478,134
  243,478,263
  243,478,386
  243,478,526
  243,478,744
  243,478,938
  243,479,072
  243,479,104
  243,479,152
  243,479,162
  243,479,362
  243,479,409
  243,479,641
  243,479,674
  243,479,833
  243,479,914
  243,479,991
  243,480,029
  243,480,090
  243,480,129
  243,480,219
  243,480,267
  243,480,451
  243,480,510
  243,480,543
  243,480,579
  243,480,625
  243,480,633
  243,480,812
  243,480,908
  243,481,022
  243,481,167
  243,481,416
  243,481,428
  243,481,560
  243,481,599
  243,481,609
  243,481,692
  243,481,830
  243,481,936
  243,481,994
  243,482,030
  243,482,043
  243,482,136
  243,482,146
  243,482,152
  243,482,283
  243,482,368
  243,482,464
  243,482,516
  243,482,531
  243,482,577
  243,482,643
  243,482,732
  243,483,201
  243,483,276
  243,483,430
  243,483,481
  243,483,491
  243,483,619
  243,484,043
  243,484,166
  243,484,465
  243,484,540
  243,484,887
  243,485,124
  243,485,129
  243,485,303
  243,485,341
  243,485,422
  243,485,616
  243,485,721
  243,485,874
  243,486,082
  243,486,195
  243,486,405
  243,486,596
  243,486,666
  243,486,911
  243,486,919
  243,487,225
  243,487,871
  243,487,877
  243,487,890
  243,488,311
  243,488,379
  243,488,572
  243,489,779
  243,490,548
  243,490,821
  243,490,972
-
T
-
C
-
2
C
-
A
A/5
-
2/-
3
3
5
5
C/T
G
-
G
-
3
2/-
GA/-
A/2
A
C
G/-
-
5
G
-
C/G
C
C
C
T
A
2
-
6/-
4/-
4/-
G/5
2/-
4/-
5
G
-
T
A
A
C
T
G
A
T
A
T
-
8
T
A
C
3/C
4/-
T/C
G/C
T/C
A
T
A
C
A
5/G
-
C
C
T
A
A
C
A
A
C
A
G
T
C
T
T
G
A
G
A
G
A
A
C
G
A
C
C
T
G
C
G
G
T
C
C
-
-
A
G
C
G
G
G
A
G
C
T
T
G
C
T
T
-
T/5
C
G
T
-
A
A
-
T
T
G
C
T
2
T
4/AC
C
A
A
C
C
C
-
A
C
A
G
C
G
A
G
T
T
A
G
2
T
2
-
A
A