Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 73,261 (bp)   Positions: 111
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NCrl (KNAW) 
.183
--
--
--
.092
.071
.066
.222
.39
.14
--
--
--
--
.139
.315
.52
.172
.189
.49
.077
1.0
.094
.04
.319
.57
.15
.823
--
.137
--
--
--
.743
.007
--
.001
--
.072
.011
.006
.025
.148
--
--
.484
.101
--
--
--
.122
.611
.061
.064
--
.959
--
--
.096
.107
.261
.001
.136
.0
.0
1.0
.008
.235
.071
.755
.068
.22
.251
.051
.006
.06
.366
.117
.048
.022
.116
.015
.06
.051
.081
.011
.002
.001
.097
.005
.006
.012
.021
.152
.047
--
--
.108
.002
.062
.042
.585
.047
.154
.064
.153
.152
.044
.009
.001
.077
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
Ap2a2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Muc6
12
C
C
T
C
C
G
T
G
G
A
A
T
A
A
G
G
T
C
G
8
T
A
T
G
G
T
T
G
C
T
G
G
A
A
16
T
T
C
A
4
T
T
C
T
G
A
A
C
C
A
T
G
C
5
C
2
T
G
G
G
T
12
A
T
T
C
T
A
C
A
T
2
T
C
T
T
T
C
C
A
T
T
C
C
G
T
C
G
A
2
G
C
C
C
T
C
A
T
T
A
C
3
G
G
G
4
T
A
T
G
  221,463,105
  221,463,146
  221,463,196
  221,463,215
  221,465,427
  221,465,567
  221,465,590
  221,465,620
  221,466,420
  221,466,437
  221,466,471
  221,467,883
  221,468,142
  221,468,331
  221,468,771
  221,468,898
  221,469,961
  221,470,402
  221,470,911
  221,472,607
  221,472,916
  221,473,070
  221,473,730
  221,473,757
  221,473,934
  221,474,001
  221,474,547
  221,475,213
  221,475,344
  221,475,569
  221,475,791
  221,475,810
  221,475,821
  221,475,921
  221,476,680
  221,477,078
  221,477,505
  221,477,687
  221,481,437
  221,483,033
  221,483,036
  221,483,040
  221,483,146
  221,483,683
  221,483,712
  221,483,904
  221,483,974
  221,484,292
  221,484,302
  221,484,312
  221,484,521
  221,484,652
  221,484,903
  221,485,442
  221,486,412
  221,486,540
  221,486,816
  221,486,817
  221,489,802
  221,489,918
  221,490,076
  221,490,309
  221,490,542
  221,491,010
  221,491,361
  221,491,604
  221,493,194
  221,494,302
  221,494,586
  221,494,798
  221,495,080
  221,495,435
  221,495,507
  221,495,698
  221,495,765
  221,496,043
  221,496,829
  221,497,669
  221,498,504
  221,500,402
  221,500,555
  221,500,946
  221,501,042
  221,501,058
  221,501,069
  221,502,856
  221,503,230
  221,503,285
  221,503,309
  221,504,010
  221,504,177
  221,504,555
  221,505,977
  221,508,190
  221,509,246
  221,510,285
  221,511,361
  221,511,993
  221,513,366
  221,514,210
  221,515,199
  221,515,517
  221,515,714
  221,516,942
  221,517,438
  221,518,577
  221,518,580
  221,519,355
  221,520,113
  221,522,368
  221,524,581
-
T
6
-
T
T
A
-
A
14
2
G
C
-
125
A
A
9
T
G/-
-
C
AT/3
C
A
A
A
C
A
T
T/2
T
A
5
G
-
T/-
-
T
T
-
3
T/45
3/4
C
A
C
C
CA/3
A
G
C
A
T
5/-
-
2/-
T/-
C
A
A
-
-
5
C
C
T
C
G
T
G
C
-
G
A
A
A
C
T
17
T
C
3
2
3
T
C
G
A
-
-
A
T
T
T
A
C/5
G
C
C
G
T
-
A
C
T
-
A
G
C
?