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Edit Strains
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Sequence Annotation
Assembly mRatBN7.2
Display an overview plot of the entire region. Useful if the region is too large to view on one screen
Variant Overview Plot
The variant distribution feature will display total counts for all genes and intergenic regions.
Variant Distribution Graph
GA Tool: All genes in the current region will be annotated by the Gene Annotater (GA Tool).
Annotate This Region
Download this graph to Excel or a text file
Download Data
Variant Visualizer Help Documentation
Help Docs
Chromosome
Start Position
Stop Position
Region Size:
18,415 (bp)
Positions:
31
Genes
( + )
Genes
( - )
mRatBN7.2
LE/Stm (2019)
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--
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Utp15
Utp15
Utp15
Utp15
T
C
T
G
T
C
A
G
G
3
T
A
G
A
A
T
C
G
T
C
9
G
C
A
A
G
T
G
T
G
C
29,594,660
29,594,795
29,594,807
29,595,698
29,595,986
29,596,791
29,597,229
29,598,148
29,598,579
29,599,363
29,600,666
29,600,694
29,601,431
29,602,656
29,602,709
29,602,929
29,603,948
29,606,756
29,607,023
29,607,085
29,607,097
29,607,105
29,607,364
29,607,739
29,608,245
29,608,369
29,608,555
29,608,758
29,609,181
29,610,994
29,612,226
A
T
C
A
C
G
C
A
A
-
C
G
A
T
T
C
T
A
C
A
-
A/-
T
G
G
A
-
A
A
A
T