Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 88,375 (bp)   Positions: 135
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LL/MavRrrcAek (2020) 
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
Uaca
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
C
T
T
A
A
A
A
T
A
C
T
G
5
T
T
T
A
T
C
T
C
C
T
-
G
A
T
T
C
T
G
A
A
G
C
G
C
A
T
A
7
C
T
A
3
-
G
T
A
G
A
C
C
G
T
G
G
-
G
G
A
4
A
A
T
A
G
G
C
A
C
G
T
-
C
G
A
A
A
-
C
T
A
-
A
C
C
C
T
G
5
C
C
G
G
T
A
A
A
C
G
G
G
A
C
A
A
G
T
-
C
C
G
T
C
T
4
C
G
-
A
T
A
T
A
G
C
A
20
2
2
A
-
T
  61,259,427
  61,259,581
  61,260,373
  61,260,759
  61,260,823
  61,261,700
  61,261,788
  61,261,875
  61,263,030
  61,263,323
  61,264,148
  61,264,182
  61,264,201
  61,264,206
  61,264,229
  61,264,343
  61,264,429
  61,264,573
  61,265,148
  61,265,576
  61,265,659
  61,266,595
  61,266,981
  61,267,357
  61,267,979
  61,267,993
  61,269,723
  61,269,761
  61,270,455
  61,271,155
  61,271,675
  61,271,937
  61,272,091
  61,272,174
  61,272,185
  61,272,508
  61,273,568
  61,274,060
  61,274,083
  61,274,410
  61,274,734
  61,274,978
  61,278,468
  61,280,764
  61,281,189
  61,282,207
  61,282,577
  61,284,815
  61,285,847
  61,286,898
  61,287,533
  61,287,576
  61,289,247
  61,289,734
  61,290,111
  61,290,272
  61,290,284
  61,290,690
  61,294,315
  61,296,305
  61,296,544
  61,296,619
  61,297,263
  61,297,848
  61,299,871
  61,299,908
  61,300,586
  61,301,603
  61,301,957
  61,302,137
  61,302,255
  61,303,238
  61,303,664
  61,304,978
  61,305,143
  61,305,775
  61,306,046
  61,306,142
  61,306,680
  61,307,112
  61,308,444
  61,309,303
  61,309,566
  61,310,659
  61,313,595
  61,313,719
  61,315,450
  61,315,451
  61,316,076
  61,316,086
  61,316,427
  61,317,133
  61,317,707
  61,318,214
  61,318,413
  61,319,799
  61,320,162
  61,321,454
  61,321,728
  61,322,023
  61,322,106
  61,322,304
  61,322,427
  61,322,746
  61,323,367
  61,323,857
  61,325,119
  61,326,082
  61,326,375
  61,326,880
  61,328,125
  61,328,182
  61,328,648
  61,329,044
  61,329,426
  61,330,694
  61,331,510
  61,331,737
  61,332,202
  61,333,657
  61,334,562
  61,335,007
  61,335,210
  61,335,236
  61,336,238
  61,337,282
  61,337,723
  61,340,380
  61,340,669
  61,341,235
  61,341,352
  61,341,488
  61,342,604
  61,346,160
  61,347,081
-
G
C
A
G
G
G
G
-
G
G
G
A
-
G
C
C
G
G
T
G
T
G
A
T
C
C
C
G
G
A
A
G
G
A
G
C
T
G
C
T
-
T
C
G
-
4/A
A
C
G
T
C
T
T
T
C
A
A
T
A
T
G
-
G
G
C
G
-
A
T
G
T
A
A
22
G
A
G
G
T
3
T
G
G
4
G
-
T
T
C
C/A
-
T
T
T
A
C
-
G
G
T
A
A
T
-
A
G
G
A
C
2
T
A
A
C
T
C
-
G
A
C
G
C
T
C
G
A
T
G
-
-
-
-/T
2
A