Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 161,303 (bp)   Positions: 444
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LEXF2B/Stm (2019) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
Taok3
G
-
T
A
G
T
-
G
G
G
T
-
T
T
-
C
T
T
C
C
A
A
T
C
-
T
12
A
C
G
G
A
C
A
C
C
5
A
T
C
4
T
-
T
T
T
T
C
C
C
A
G
-
T
G
14
2
7
4
G
G
G
T
A
-
T
G
C
-
3
A
A
T
C
C
T
C
C
G
G
C
A
2
G
C
T
-
C
2
C
C
-
T
C
-
T
-
-
-
G
-
T
-
A
T
-
-
A
-
G
C
-
-
G
-
-
A
-
T
T
T
C
-
-
-
C
T
C
C
G
-
-
C
-
G
-
-
C
T
-
T
C
-
-
-
C
A
C
-
G
-
T
A
G
-
T
-
-
C
T
A
-
-
A
C
A
-
-
A
A
A
-
-
C
C
T
-
T
C
-
A
G
-
T
A
-
-
C
C
A
-
-
A
G
-
A
-
-
T
-
A
T
G
-
G
A
-
C
C
T
G
T
G
T
G
A
-
A
-
-
G
2
C
-
-
3
2
C
G
G
C
G
3
-
A
G
A
-
T
C
T
T
A
A
-
T
-
G
-
G
G
-
-
T
-
2
-
-
A
-
C
C
-
A
2
C
-
C
C
C
A
G
T
C
G
T
A
A
A
T
C
T
T
C
T
T
A
C
2
A
-
-
G
4
A
A
G
-
T
2
C
G
T
G
T
C
C
G
A
T
G
C
C
A
A
T
A
A
C
A
A
T
T
A
A
C
A
C
T
G
G
A
-
-
T
T
C
G
8
C
A
G
C
T
T
A
A
C
T
C
39
A
T
C
T
T
C
A
2
-
G
G
A
C
16
G
C
110
T
A
T
A
A
G
A
A
G
C
2
81
C
T
C
2
A
T
T
A
A
-
G
A
A
T
G
T
T
G
C
G
C
A
C
T
G
C
T
C
A
C
G
C
T
C
T
T
C
T
G
T
G
34
A
T
G
C
C
A
G
T
G
-
A
8
20
T
T
C
T
A
G
T
C
G
  39,313,320
  39,313,594
  39,314,485
  39,314,731
  39,316,055
  39,317,670
  39,318,108
  39,318,369
  39,319,359
  39,319,548
  39,322,769
  39,323,137
  39,323,251
  39,323,493
  39,323,915
  39,323,994
  39,324,248
  39,325,585
  39,325,971
  39,325,973
  39,326,088
  39,326,774
  39,326,988
  39,327,125
  39,327,257
  39,327,382
  39,327,613
  39,327,624
  39,329,042
  39,329,936
  39,330,019
  39,330,206
  39,330,368
  39,332,033
  39,332,073
  39,332,318
  39,333,318
  39,333,751
  39,335,242
  39,336,163
  39,336,765
  39,338,305
  39,338,371
  39,338,407
  39,338,420
  39,338,422
  39,338,424
  39,338,625
  39,338,865
  39,339,161
  39,339,450
  39,339,521
  39,339,746
  39,340,026
  39,340,027
  39,340,044
  39,340,609
  39,340,896
  39,340,981
  39,342,896
  39,343,696
  39,344,007
  39,346,520
  39,346,989
  39,347,816
  39,347,877
  39,348,667
  39,351,073
  39,351,426
  39,351,431
  39,351,773
  39,352,531
  39,352,652
  39,353,714
  39,353,859
  39,353,891
  39,354,206
  39,354,238
  39,354,517
  39,354,541
  39,354,826
  39,354,864
  39,354,957
  39,355,322
  39,355,688
  39,355,811
  39,355,886
  39,356,189
  39,356,204
  39,356,223
  39,356,226
  39,356,246
  39,356,247
  39,356,274
  39,356,375
  39,356,476
  39,356,567
  39,356,724
  39,356,776
  39,356,962
  39,357,511
  39,357,611
  39,357,718
  39,357,789
  39,357,898
  39,358,237
  39,358,501
  39,358,534
  39,358,802
  39,358,879
  39,359,123
  39,359,133
  39,359,149
  39,359,179
  39,359,210
  39,359,238
  39,359,524
  39,359,531
  39,359,581
  39,359,607
  39,359,616
  39,359,832
  39,360,036
  39,360,140
  39,360,288
  39,360,319
  39,360,320
  39,360,365
  39,360,571
  39,360,618
  39,360,629
  39,360,775
  39,360,836
  39,361,054
  39,361,161
  39,361,487
  39,361,551
  39,361,626
  39,361,718
  39,361,873
  39,362,012
  39,362,185
  39,362,253
  39,362,293
  39,362,385
  39,362,578
  39,362,874
  39,362,933
  39,363,065
  39,363,418
  39,363,541
  39,363,637
  39,363,731
  39,363,761
  39,363,996
  39,364,100
  39,364,663
  39,364,737
  39,364,931
  39,365,196
  39,365,357
  39,365,438
  39,365,808
  39,365,993
  39,365,994
  39,366,021
  39,366,034
  39,366,180
  39,366,196
  39,366,290
  39,366,334
  39,366,348
  39,366,437
  39,366,632
  39,366,634
  39,366,727
  39,366,757
  39,366,774
  39,366,790
  39,367,095
  39,367,186
  39,367,253
  39,367,317
  39,367,480
  39,367,691
  39,367,708
  39,367,744
  39,367,772
  39,367,780
  39,367,896
  39,367,950
  39,368,031
  39,368,043
  39,368,248
  39,368,615
  39,368,706
  39,368,955
  39,369,333
  39,369,380
  39,369,496
  39,369,530
  39,369,745
  39,369,841
  39,369,865
  39,369,879
  39,369,914
  39,369,958
  39,370,095
  39,370,114
  39,370,158
  39,370,292
  39,370,445
  39,370,446
  39,370,471
  39,370,502
  39,370,519
  39,370,626
  39,370,712
  39,370,833
  39,371,253
  39,371,265
  39,371,277
  39,371,836
  39,371,911
  39,371,968
  39,372,083
  39,372,111
  39,372,251
  39,372,339
  39,372,387
  39,372,617
  39,372,673
  39,372,815
  39,372,900
  39,372,925
  39,372,986
  39,373,054
  39,373,776
  39,374,300
  39,374,431
  39,374,695
  39,374,890
  39,375,025
  39,375,373
  39,375,462
  39,375,647
  39,375,695
  39,375,732
  39,375,822
  39,376,768
  39,377,205
  39,377,323
  39,377,352
  39,378,938
  39,379,166
  39,379,358
  39,380,558
  39,380,708
  39,381,024
  39,381,213
  39,382,082
  39,384,011
  39,384,205
  39,384,833
  39,386,631
  39,387,442
  39,387,798
  39,389,338
  39,389,625
  39,389,781
  39,389,820
  39,390,763
  39,390,794
  39,390,974
  39,391,084
  39,391,158
  39,391,244
  39,392,071
  39,392,085
  39,392,113
  39,392,357
  39,392,484
  39,392,717
  39,393,120
  39,393,940
  39,395,028
  39,395,047
  39,395,201
  39,396,065
  39,396,550
  39,396,579
  39,398,687
  39,398,970
  39,399,807
  39,400,120
  39,401,375
  39,401,457
  39,401,640
  39,402,008
  39,403,105
  39,404,415
  39,404,733
  39,405,225
  39,405,327
  39,405,582
  39,406,578
  39,406,585
  39,407,599
  39,407,946
  39,408,292
  39,409,108
  39,409,591
  39,409,974
  39,410,750
  39,410,751
  39,410,930
  39,411,601
  39,412,429
  39,412,433
  39,412,504
  39,412,622
  39,412,799
  39,412,847
  39,412,871
  39,412,935
  39,413,031
  39,413,884
  39,414,001
  39,415,669
  39,416,213
  39,417,278
  39,418,288
  39,419,088
  39,419,090
  39,419,099
  39,419,732
  39,419,817
  39,420,683
  39,421,020
  39,422,489
  39,422,962
  39,424,472
  39,427,212
  39,427,549
  39,427,886
  39,427,960
  39,428,049
  39,428,217
  39,428,244
  39,428,427
  39,429,560
  39,432,091
  39,432,093
  39,432,208
  39,432,480
  39,432,899
  39,432,942
  39,432,951
  39,432,954
  39,432,971
  39,433,373
  39,433,393
  39,433,473
  39,433,797
  39,433,802
  39,433,847
  39,433,991
  39,435,239
  39,435,258
  39,435,469
  39,436,163
  39,437,322
  39,442,798
  39,442,966
  39,446,438
  39,447,137
  39,448,337
  39,448,344
  39,448,347
  39,449,585
  39,449,662
  39,449,938
  39,450,044
  39,450,062
  39,450,755
  39,451,028
  39,451,813
  39,451,894
  39,451,896
  39,452,212
  39,452,496
  39,453,331
  39,453,885
  39,453,975
  39,454,195
  39,454,912
  39,454,929
  39,455,112
  39,455,189
  39,455,425
  39,455,854
  39,456,047
  39,456,137
  39,456,208
  39,456,325
  39,458,087
  39,458,280
  39,458,969
  39,459,124
  39,459,264
  39,459,291
  39,459,917
  39,460,052
  39,460,214
  39,460,578
  39,461,634
  39,462,344
  39,462,999
  39,463,464
  39,464,088
  39,464,185
  39,464,258
  39,464,337
  39,464,658
  39,465,432
  39,465,524
  39,465,892
  39,465,916
  39,466,056
  39,466,244
  39,467,163
  39,467,755
  39,468,025
  39,468,463
  39,469,345
  39,469,519
  39,469,614
  39,470,047
  39,470,863
  39,471,461
  39,471,582
  39,472,323
  39,473,368
  39,473,443
A
2
A
T
C
C
2
-
C
A
C
G
C
C
2
T
C
C
T
T
G
-
C
G
G
G
-
G/-
T
A
A
G
T
C
T
T
-
G
A/C
T
-
C
2
C
-/A
A/-
A/-
T
G
T
G
A
C
G
T
14/-
-
-
-
A
A
A
C
G
T
-
-
A
G
-
T
G
C
-
-
-
-
-
-
-
-
T
2/-
A
-
-
C
T
-
-
-
2
C
A
C
-
T
A
G
-
A
-
C
-
-
C
C
-
C
-
-
G
T
A
C
C
T
C
-
-
-
-
C
A
C
G
C
-
-
A
C
T
-
A
-
A
T
-
-
A
G
-
C
C
C
-
-
-
T
A
C
C
-
-
C
A
T
A
-
-
-
G
G
C
A
-
A
C
-
-
-
A
G
G
G
-
T
-
-
A
-
-
A
C
-
2
2
-
-
G
A
C
-
T
G
-
T
G
-
C
T
A
-
A
-
T
C
-
-
-
-
G
T
A
-
-
A
-
A
C
T
-
-
A
G
-
-
-
-
-
-
-
-
A
-
-
-
4
-
-
-
G
-
-
G
-
4
-
A
-
A
A
T
G/-
C
2/-
T
A
T
A
T
C/A
7
G
-
T
A
G
-
G
G
A
-
T
A
G
-
G
T
C
T
C
G
T
C
C
-/T
T
-
C
T
4
A
-
G
G
-
T
C
-
T
-/A
C
A
C
-/A
-/A
A
G
C
A
T
T
G
G
-/C
C
G
T
G
T
C
C
G
G
T
G
T
C
A
A
G
-/2
-/2
C
C
T
A
-
T
C
A
T
C
G
G
G
T
G
A
-
G
G
T
A
C
T
G
-
5
A
A
G
T
-
A
T
-
G/-
C
C
T
G
A
G
C
-/A
T
2/-
-
T/-
C
T
-
G
C
C
-/T
T/-
T
A
G
G
C
T
A/-
C/-
A
T
A
T
G
A
C
A
A
C
T
T/-
T
A
T
C
T
C
C
G
C
A
C
A
-
C
C
A
T
T
G
C
C
A
T
-
-
-
C/-
G/-
G
C
T
A
C
G
C