Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 103,920 (bp)   Positions: 242
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
ACI/N (2020) 
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
Snx25
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
T
T
C
A
G
C
-
C
G
G
T
C
A
C
A
A
T
T
T
T
C
A
A
T
T
A
T
A
T
T
G
C
A
C
G
T
G
G
G
G
G
A
A
G
A
T
G
C
39
A
T
G
A
-
2
-
G
G
C
C
C
C
G
T
G
T
G
C
A
A
A
G
G
A
A
G
C
G
A
G
A
2
C
G
G
T
T
C
C
C
G
G
G
A
97
G
G
T
T
T
T
C
T
G
T
G
G
T
G
C
G
A
G
C
A
-
T
A
G
T
T
G
-
C
T
C
A
C
C
G
C
T
C
C
A
A
C
T
A
T
G
G
C
G
2
C
T
A
T
A
-
T
C
G
G
C
G
T
G
T
-
T
A
T
C
A
G
T
T
G
C
C
G
3
5
A
C
40
G
G
T
C
G
-
C
T
A
T
A
A
G
A
A
A
4
T
G
C
A
C
G
A
C
G
A
A
A
T
C
A
G
C
A
C
A
T
G
A
T
T
G
A
A
G
G
G
-
C
A
3
C
T
4
T
A
A
4
-
T
C
14
  46,136,717
  46,136,813
  46,138,329
  46,139,979
  46,141,603
  46,141,696
  46,141,892
  46,141,909
  46,142,195
  46,142,490
  46,142,573
  46,143,096
  46,143,233
  46,143,622
  46,143,872
  46,143,882
  46,144,062
  46,144,124
  46,144,153
  46,144,305
  46,145,235
  46,147,252
  46,148,527
  46,148,546
  46,148,692
  46,148,742
  46,148,881
  46,150,220
  46,150,878
  46,150,898
  46,151,010
  46,151,108
  46,151,667
  46,151,716
  46,152,205
  46,153,148
  46,154,098
  46,154,799
  46,158,232
  46,158,443
  46,158,469
  46,159,210
  46,160,057
  46,161,167
  46,162,849
  46,163,217
  46,163,881
  46,164,827
  46,166,760
  46,166,780
  46,167,087
  46,169,563
  46,170,925
  46,171,677
  46,173,060
  46,173,133
  46,173,273
  46,174,740
  46,174,777
  46,175,567
  46,176,082
  46,176,937
  46,177,699
  46,177,883
  46,177,985
  46,179,032
  46,179,771
  46,181,106
  46,181,591
  46,181,681
  46,182,330
  46,183,027
  46,184,782
  46,187,591
  46,187,637
  46,187,652
  46,188,181
  46,192,551
  46,192,989
  46,193,016
  46,193,029
  46,193,033
  46,193,036
  46,193,228
  46,193,269
  46,194,456
  46,194,492
  46,194,821
  46,194,941
  46,195,325
  46,195,478
  46,197,296
  46,198,071
  46,199,051
  46,200,172
  46,200,231
  46,200,658
  46,201,304
  46,201,489
  46,201,685
  46,201,944
  46,202,129
  46,202,347
  46,202,436
  46,202,443
  46,202,766
  46,202,970
  46,203,026
  46,203,029
  46,203,596
  46,203,616
  46,205,424
  46,205,470
  46,205,569
  46,205,845
  46,205,911
  46,206,619
  46,206,724
  46,206,746
  46,207,186
  46,207,191
  46,207,346
  46,207,347
  46,207,408
  46,207,556
  46,208,206
  46,208,223
  46,208,295
  46,208,704
  46,208,861
  46,208,937
  46,208,938
  46,210,489
  46,210,671
  46,211,069
  46,213,176
  46,213,358
  46,213,792
  46,214,938
  46,215,565
  46,216,137
  46,216,764
  46,217,703
  46,219,176
  46,219,324
  46,219,748
  46,219,833
  46,219,840
  46,219,843
  46,219,851
  46,219,858
  46,219,993
  46,219,995
  46,220,014
  46,220,090
  46,220,103
  46,220,107
  46,220,110
  46,220,125
  46,220,126
  46,220,178
  46,221,344
  46,221,387
  46,222,308
  46,222,349
  46,222,613
  46,223,026
  46,223,530
  46,223,568
  46,224,358
  46,224,453
  46,225,236
  46,225,290
  46,225,414
  46,225,497
  46,225,519
  46,225,856
  46,226,018
  46,226,025
  46,226,172
  46,226,564
  46,226,698
  46,226,737
  46,226,961
  46,227,230
  46,227,455
  46,227,536
  46,227,549
  46,227,796
  46,227,894
  46,228,042
  46,228,062
  46,228,123
  46,228,210
  46,228,403
  46,228,827
  46,229,234
  46,229,561
  46,229,775
  46,229,958
  46,230,403
  46,230,589
  46,230,913
  46,230,990
  46,230,999
  46,231,252
  46,231,396
  46,231,476
  46,231,618
  46,232,154
  46,232,215
  46,232,230
  46,232,378
  46,232,426
  46,232,568
  46,232,620
  46,232,623
  46,232,722
  46,232,752
  46,232,821
  46,232,944
  46,233,228
  46,233,411
  46,233,412
  46,233,433
  46,233,605
  46,233,659
  46,233,883
  46,233,998
  46,234,030
  46,234,061
  46,234,364
  46,234,609
  46,235,148
  46,235,448
  46,235,583
  46,235,965
  46,235,981
  46,236,714
  46,237,042
  46,237,291
  46,237,676
G
C
G
T
G
T
G
A
A
A
A
C
A
G
T
G
G
C
G
C
C
T
G
G
C
A
G
C
G
A
C
A
G/-
G/-
G
A
G
C
T
T
A
A
G
C
A
T
C
A
T
-
G
A
A
G
T
-
C
-/T
A/-
T
T
T
T
A
G
A
C
A
T
G
G
G
A
-
C
G
A
T
A
G
A
-
-
T
A
T
C
G
T
T
T
A
T
A
G
-
A
A
G
C
C
G
T
G
A
A
A
G/T
T/C
T/C
G/A
C
C
A/-
A
G
C
A
G
C
G
C
A
6
T
C
-
C
C/G
T
C
T
-/C
A
T
T
G/-
A
G
G
A
A
T
G
A
-
T
C
G
C
C
A
-
T
A
C
G
T
C
A
C
A
C
G
G
T
G
C
C
G
A
T
T
A
-
-
C
A/-
-
T
T
C
T
C
T
T
C
G
A
G
G
A
C
G
G
-
C
A
G
G
T
T
G
T
C
G
G
G
C
T
G
A
T
G
T
T
C
C
G
C
G
T
T
C
A
A
A
8
T
G
-
T
G
-
A
G
G
-
4
C
T
-