Variant Visualizer (Variants)

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Sequence Annotation

Assembly mRatBN7.2

Genes ( + )

Genes ( - )

mRatBN7.2

F344/Stm (2019)


Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2										Smoc2
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	Trnap-agg46	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
-	T	T	T	G	C	C	T	4	-	G	A	C	G	C	T	G	T	T	A	C	G	A	G	C	G	A	T	C	T	T	T	A	T	A	T	T	T	T	A	G	G	A	T	G	T	A	A	G	T	T	T	A	A	T	C	T	T	A	-	G	C	C	T	T	T	-	6	G	A	T	G	A	3	-	A	A	C	A	T	C	C	C	A	-	T	-	G	T	C	G	T	G	-	C	-	G	C	G	-	A	A	T	T	A	A	2	C	C	C	C	-	G	T	C	C	T	C	A	C	G	T	C	G	T	A	G	G	A	T	T	C	T	A	A	C	3	-	G	A	C	C	C	T	C	C	T	A	G	C	-	C	G	T	G	-	C	A	T	T	C	C	G	G	A	T	G	C	C	A	C	C	G	T	G	G	C	A	T	T	T	A	G	A	C	G	T	C	G	G	T	-	T	C	G	T	A	C	A	G	G	T	C	T	C	T	T	A	A	C	G	A	G	C	G	T	C	C	59	G	G	A	C	T	C	C	T	T	T	T	A	T	G	G	A	T	G	C	G	13	T	C	G	T	4	G	T	C	A	G	C	G	-	G	T	C	A	G	A	A	C	G	A	A	C	T	A	C	C	C	G	C	C	G	C	G	T	C	C	A	T	A	-	C	C	-	A	A	G	G	G	T	T	G	A	C	A	A	G	C	A	T	A	G	C	C	A	10	C	A	T	-	C	C	G	G	A	C	T	G	3	A	G	T	T	T	C	A	A	2	6	C	T	T	T	T	T	A	A	G	G	C	8	C	T	C	C	A	A	T	T	T	T	T	G	C	C	T	G	T	A	T	G	T	A	T	A	C	-	T	C	A	A	C	G	T	C	G	T	A	A	-	-	C	A	12	T	G	T	T	T	G	2	G	T	A	T	A	C	G	A	G
55,264,245	55,264,943	55,265,363	55,265,608	55,265,665	55,265,757	55,266,023	55,266,352	55,266,787	55,266,816	55,267,382	55,267,873	55,267,918	55,269,002	55,269,238	55,269,281	55,270,032	55,270,036	55,270,042	55,270,185	55,270,200	55,270,757	55,270,760	55,271,179	55,271,256	55,271,360	55,271,454	55,271,577	55,271,603	55,271,615	55,271,772	55,272,118	55,272,567	55,272,672	55,272,737	55,273,006	55,273,073	55,273,215	55,273,362	55,273,452	55,273,521	55,273,620	55,273,789	55,274,221	55,274,408	55,274,482	55,274,569	55,275,809	55,275,855	55,276,000	55,276,400	55,276,402	55,276,527	55,276,628	55,277,082	55,279,495	55,279,631	55,279,873	55,280,028	55,280,043	55,280,094	55,280,828	55,281,336	55,281,392	55,281,425	55,281,461	55,281,515	55,281,993	55,282,341	55,282,347	55,282,596	55,283,204	55,283,552	55,283,557	55,284,291	55,285,625	55,285,878	55,286,221	55,286,236	55,286,802	55,287,128	55,288,778	55,289,068	55,289,072	55,290,144	55,290,279	55,290,350	55,290,611	55,291,125	55,291,264	55,292,171	55,292,220	55,293,298	55,293,547	55,294,229	55,295,241	55,295,297	55,297,869	55,298,976	55,299,086	55,299,302	55,299,460	55,299,962	55,300,836	55,301,471	55,301,778	55,302,160	55,302,174	55,302,302	55,302,354	55,302,356	55,302,506	55,302,768	55,303,427	55,303,543	55,304,197	55,304,323	55,304,557	55,305,156	55,305,594	55,306,460	55,306,895	55,307,244	55,307,291	55,307,400	55,307,581	55,308,377	55,308,632	55,308,674	55,309,123	55,309,127	55,309,258	55,309,295	55,309,691	55,309,741	55,310,921	55,310,945	55,310,950	55,310,970	55,311,316	55,311,352	55,311,838	55,311,842	55,311,883	55,311,904	55,312,481	55,313,154	55,313,244	55,313,280	55,313,501	55,314,234	55,315,675	55,316,008	55,316,134	55,316,242	55,316,552	55,316,826	55,317,503	55,317,630	55,317,893	55,318,302	55,318,470	55,318,480	55,318,489	55,319,005	55,319,203	55,319,307	55,319,419	55,319,510	55,319,570	55,320,576	55,321,007	55,321,212	55,321,245	55,321,619	55,321,749	55,321,862	55,322,182	55,323,171	55,323,232	55,323,334	55,323,777	55,324,171	55,324,225	55,324,424	55,324,623	55,324,737	55,325,362	55,325,582	55,326,144	55,326,247	55,326,804	55,327,009	55,327,242	55,327,300	55,327,326	55,328,360	55,328,416	55,328,503	55,328,922	55,329,665	55,330,049	55,330,659	55,330,749	55,330,762	55,331,098	55,331,422	55,331,507	55,331,527	55,331,673	55,331,727	55,331,751	55,331,807	55,332,082	55,332,084	55,332,180	55,332,556	55,332,739	55,333,551	55,333,621	55,334,006	55,334,770	55,335,347	55,335,664	55,335,922	55,336,210	55,336,820	55,336,869	55,337,003	55,337,095	55,337,626	55,338,370	55,339,045	55,339,242	55,339,377	55,339,386	55,339,430	55,340,027	55,340,042	55,341,101	55,342,540	55,342,738	55,343,587	55,344,623	55,344,850	55,345,043	55,345,382	55,345,805	55,345,894	55,346,061	55,346,103	55,346,267	55,346,893	55,347,163	55,347,281	55,347,446	55,347,688	55,348,529	55,348,976	55,349,696	55,349,841	55,350,040	55,350,456	55,351,178	55,351,807	55,351,878	55,351,921	55,352,164	55,352,424	55,352,549	55,352,563	55,352,579	55,352,589	55,352,909	55,353,408	55,353,504	55,353,994	55,354,004	55,355,327	55,355,483	55,355,783	55,355,824	55,356,142	55,356,152	55,356,154	55,356,163	55,356,176	55,356,399	55,356,481	55,357,124	55,357,268	55,357,283	55,357,364	55,357,672	55,357,805	55,357,829	55,358,023	55,358,422	55,358,535	55,358,583	55,358,615	55,358,830	55,359,207	55,359,214	55,359,326	55,359,478	55,359,479	55,359,507	55,359,546	55,359,567	55,359,732	55,359,746	55,359,754	55,359,965	55,360,047	55,360,120	55,360,276	55,360,511	55,360,566	55,360,637	55,360,657	55,361,204	55,361,412	55,361,700	55,361,702	55,361,704	55,362,288	55,362,581	55,362,787	55,363,484	55,363,490	55,364,095	55,364,371	55,364,628	55,364,897	55,364,993	55,365,270	55,365,279	55,365,747	55,365,813	55,365,922	55,365,978	55,366,005	55,366,052	55,366,135	55,366,193	55,366,251	55,366,349	55,366,375	55,366,511	55,366,512	55,366,608	55,366,796	55,366,801	55,366,892	55,367,117	55,367,380	55,367,394	55,367,455	55,367,459	55,367,694	55,367,999	55,368,111	55,368,499	55,368,931	55,369,423	55,369,874	55,370,160	55,370,176	55,370,211	55,370,311	55,370,474	55,370,584	55,372,792	55,373,185	55,374,745	55,375,499	55,375,562	55,375,655	55,377,388	55,378,076	55,378,118	55,378,121	55,379,285	55,379,597	55,379,676	55,380,240	55,381,518	55,381,550	55,382,707	55,383,123	55,384,044	55,384,746	55,384,777	55,384,849	55,384,980	55,386,149	55,386,265	55,387,190	55,387,418	55,390,236	55,391,382
G/C	C	A	C	C	T	T	C	-	4	T	G	T	T	C/T	C	A	C	C	G	-	A	G	A	T	C	T	C	T	C	C	G	T	C	C	C	C	C	G	G	T	A	G	C	A	G	G	G	T	C	C	C	T	G	C	T	C	C	T	A	A	T	T	C	C	C	2	-	-	G	C	T	-	-	2	G	G	T	C	-	T	A	T	C	G	C	A	-	C	T	A	-	C	5	A	A	A	T	A	G	G	T	G	C	T	G	-	T	T	-	-	2	A	C	T	T	C	T	T	T	A	G	T	A	A	C	C	T	G	C	C	T	C	G	T	T	-	7/T	T	T	T	T	T	C	T	T	C	G	T	T	13	T	T	G	A	4	T	G	C	C	T	T	T	A	G	C	A	T	G	T	T	T	A	G	C	C	T	C	C	C	C	T	C	G	A	A	C	T	A	A	C	G	C	T	A	A	G	T	G	T	A	C	A	C	T	C	G	G	G	T	C	C	A	T	A	C	G	T	-	A	A	-	T	C	T	T	G	C	C	G	G	G	A	A	G	C	A	-	A	-	C	G	A	C	-	A	C	T	G	A	T	A	4	A	C	T	G	C	G	G	T	A	G	G	T	C	C	T	T	G	T	T	G	A	T	A	C	T	-	G	C	G	T	T	T	6	T	G	A	A	A	A	A	T	C	A	G	G	A	A	G	G	G	T	A	T	G	-	T	G	C	A	T	A	A	A	G	T	C	A	-	C	A	A	A	A	T	G	C	-	-	T	A	C	C	C	C	G	G	A	A	T	-	T	C	T	T	G	G	C	G	C	C	C	-	T	G	C	T	A	C	G	T	A	C	C	G	T	A	T/G	T	G	T	T	A	C	T	C	C	T	G	5	7	T	T	-	C	A	C	C	C	A	-	C	C	-	C	G	T	A	G	A