Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 91,259 (bp)   Positions: 100
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
GK/FarMcwi (2019) 
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
Smarca4
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
A
A
G
G
G
A
T
A
C
T
A
T
T
G
T
C
A
T
C
T
T
T
A
C
C
-
G
-
C
T
A
-
G
C
C
C
T
T
C
G
-
T
G
A
G
G
A
C
C
C
G
G
G
G
A
G
C
-
C
-
G
G
T
C
C
T
C
C
C
-
G
A
A
T
A
A
A
G
G
G
T
G
A
C
C
C
C
8
G
3
-
C
C
T
C
G
C
G
-
  20,169,710
  20,170,638
  20,171,135
  20,171,849
  20,172,976
  20,173,072
  20,173,304
  20,174,492
  20,175,121
  20,175,764
  20,176,412
  20,176,709
  20,176,838
  20,176,840
  20,176,865
  20,177,049
  20,177,072
  20,177,184
  20,177,451
  20,177,455
  20,177,457
  20,177,462
  20,177,488
  20,178,367
  20,179,053
  20,179,382
  20,181,028
  20,183,306
  20,187,792
  20,190,289
  20,193,906
  20,193,981
  20,195,283
  20,196,946
  20,198,542
  20,199,233
  20,200,243
  20,200,822
  20,201,783
  20,202,868
  20,204,793
  20,205,621
  20,207,265
  20,208,160
  20,208,336
  20,209,215
  20,210,265
  20,210,372
  20,211,051
  20,213,255
  20,213,265
  20,213,297
  20,214,103
  20,215,333
  20,215,410
  20,216,686
  20,217,675
  20,217,985
  20,218,027
  20,218,072
  20,218,088
  20,218,385
  20,218,468
  20,220,077
  20,220,359
  20,221,519
  20,221,552
  20,223,076
  20,223,709
  20,224,090
  20,224,396
  20,224,479
  20,226,825
  20,231,239
  20,231,948
  20,233,198
  20,234,280
  20,234,769
  20,237,055
  20,237,247
  20,237,296
  20,238,054
  20,239,225
  20,242,954
  20,244,665
  20,244,811
  20,246,075
  20,246,450
  20,247,582
  20,248,994
  20,250,066
  20,250,651
  20,250,699
  20,250,782
  20,250,945
  20,253,209
  20,254,891
  20,255,299
  20,257,355
  20,258,412
T
G
T
C
A
A
-
G
G
T
C
G
C
C
A
C
T
G
A/-
-/A
A/-
-/G
C/-
T
T
G
C
A
4
T
C
G
89
T
G/-
T
A
C
C
G
A
T
A
A
G
A
A
G
T
-/A
A/-
A/-
A
A
A
G
T
T
A
T
G
A
A
C
C/T
T/-
-
A
T
T
G
A
T
G
A
G
G
C
A
A
A
C
C
G
T
A
T
T
-
A
-
2
G
T
C
T
A
T
A
T