Variant Visualizer (Variants)

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Sequence Annotation

Assembly mRatBN7.2

Genes ( + )

Genes ( - )

mRatBN7.2

BXH2/CubMcwi (2020)


Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
C	T	T	T	A	C	G	G	T	A	T	C	C	G	G	G	T	A	T	C	G	A	-	T	C	C	T	A	-	-	G	-	T	G	A	C	T	G	G	G	C	G	A	C	G	-	T	-	C	G	2	G	T	A	T	A	G	A	C	T	-	A	A	C	A	G	C	A	G	A	G	T	C	-	A	A	G	G	T	T	C	A	2	C	C	A	C	C	G	A	G	C	A	G	T	T	T	G	T	T	T	C	A	A	A	C	C	C	C	A	C	G	-	-	C	C	C	T	C	A	G	C	A	G	C	G	C	A	T	C	G	T	G	T	C	A	T	-	G	-	C	C	8	T	C	T	C	A	T	T	T	A	A	-	A	A	A	C	9	T	T	A	A	G	C	C	T	C	C	G	10	T	T	G	G	C	T	-	T	C	5	-	T	C	4	A	G	C	A	T	G	T	T	C	5	T	T	T	C	T	C	A	A	-	T	T	T	-	A	C	C	C	C	7	T	G	T	T	A	-	A	A	T	C	-	A	G	-	C	C	G	A	T	C	C	A	A	-	T	G	A	T	T	5	G	C	C	C	A	C	T	G	T	G	-	C	G	A	G	A	C	T	A	-	T	-	G	A	T	G	C	-	-	C	-	G	T	A	C	G	G	G	T	T	A	A	T	T	C	T	G	A	T	T	22	A	7	C	T	A	-	C	T	T	C	A	T	C	T	C	C	G	A	3	C	-	A	A	T	A	T	C	T	C	A	A	27	C	A	C	-	A	G	C	-	-	A	T	A	A	-	A	18	G	G	T	A	A	C	G	T	C	T	C	C	A	C	T	-	G	C	T	T	T	A	C	C	T	C	A	G	4	A	A	A	A	T	T	-	T	G	A	C	G	G	G	C	A	A	C	G	C	T	T	T	T	-	T	T	C	G	2	T	T	G	-	2	T	7	A	T	G	G	T	C	-	C	A	G	A	A	A	T	G	G	G	G	G	A	A	A	T	T	T	A	G	A	C	C	A	C	A	T	C	G	T	2	T	C	T	C	-	G	-	A	T	G	3	A	-	A	C	A	C	C	-	A	A	T	T	-	-	A	-	C	T	T	T	A	G	A	T	T	A	A	T	C	-	A	C	A	A	G	A	C	T	G	A	T	T	A	T	A	T	9	T	15	T	A	T	G	G	A	G	T	G	T	T	C	T	A	A	T	C	A	C	C	C	G	G	A	A	T	A	T	T	-	8	2	T	A	T	T	T	T	T	C	A	A	T	-	T	A	A	A	A	T	G	A	C	-	C	C	4	G	G	-	G	C	G	T	T	C
131,982,711	131,982,997	131,983,151	131,983,162	131,984,563	131,984,599	131,985,440	131,986,811	131,987,420	131,987,664	131,989,384	131,989,811	131,989,812	131,989,927	131,990,784	131,990,802	131,992,296	131,992,448	131,992,813	131,993,025	131,993,141	131,993,843	131,994,004	131,994,253	131,994,430	131,994,439	131,994,996	131,995,127	131,995,428	131,995,547	131,995,572	131,995,782	131,995,994	131,996,020	131,996,203	131,996,297	131,996,338	131,996,609	131,996,848	131,996,855	131,996,856	131,997,003	131,997,005	131,997,087	131,997,935	131,998,240	131,998,761	131,999,175	131,999,280	131,999,950	132,000,337	132,001,129	132,001,167	132,001,302	132,001,329	132,001,382	132,001,666	132,001,830	132,001,831	132,002,154	132,002,290	132,002,499	132,002,500	132,002,731	132,003,281	132,003,323	132,003,324	132,003,415	132,003,641	132,003,666	132,003,701	132,003,708	132,003,715	132,003,758	132,003,882	132,003,923	132,003,981	132,003,986	132,004,342	132,004,845	132,005,165	132,005,245	132,005,350	132,005,363	132,005,408	132,005,711	132,005,717	132,005,718	132,005,877	132,005,881	132,006,115	132,006,170	132,007,003	132,007,111	132,007,604	132,007,605	132,007,607	132,007,639	132,007,683	132,008,080	132,008,118	132,009,054	132,009,114	132,009,384	132,009,737	132,011,590	132,012,441	132,012,444	132,015,098	132,016,465	132,017,560	132,019,060	132,020,200	132,020,202	132,021,580	132,022,293	132,026,306	132,026,388	132,027,714	132,029,405	132,030,141	132,030,441	132,030,706	132,031,474	132,031,998	132,032,001	132,033,289	132,034,947	132,036,712	132,037,980	132,038,943	132,039,200	132,039,925	132,040,192	132,040,265	132,040,348	132,040,458	132,041,224	132,041,324	132,041,359	132,041,514	132,041,694	132,041,871	132,041,884	132,041,958	132,042,014	132,042,137	132,042,218	132,042,251	132,042,252	132,042,389	132,042,625	132,042,760	132,043,013	132,043,024	132,043,052	132,043,412	132,043,691	132,043,750	132,043,999	132,044,044	132,044,079	132,044,090	132,044,153	132,044,666	132,044,866	132,045,206	132,045,591	132,045,594	132,045,968	132,046,047	132,046,475	132,046,740	132,046,883	132,046,936	132,047,339	132,048,181	132,048,470	132,048,927	132,049,030	132,049,054	132,049,636	132,049,638	132,049,793	132,050,052	132,050,124	132,050,204	132,050,266	132,050,270	132,050,274	132,050,312	132,050,610	132,050,652	132,050,677	132,050,729	132,050,894	132,050,896	132,051,011	132,051,014	132,051,455	132,051,627	132,051,628	132,051,664	132,051,728	132,051,940	132,051,966	132,051,968	132,051,980	132,052,045	132,052,145	132,052,174	132,052,234	132,052,263	132,052,375	132,052,378	132,052,390	132,052,397	132,052,403	132,052,437	132,052,589	132,052,594	132,052,666	132,052,692	132,052,817	132,052,826	132,052,850	132,052,875	132,053,193	132,053,266	132,053,763	132,054,065	132,055,022	132,055,053	132,055,236	132,056,092	132,056,421	132,056,434	132,056,487	132,056,558	132,056,568	132,056,913	132,057,326	132,057,369	132,057,827	132,058,048	132,058,122	132,058,142	132,060,236	132,060,466	132,060,598	132,061,064	132,061,086	132,061,663	132,062,751	132,063,025	132,063,032	132,063,537	132,064,108	132,064,339	132,064,687	132,064,833	132,064,920	132,065,040	132,065,240	132,065,503	132,065,596	132,066,150	132,066,220	132,066,966	132,067,160	132,067,427	132,067,574	132,067,575	132,067,583	132,067,586	132,067,815	132,067,826	132,067,880	132,068,084	132,068,512	132,068,531	132,068,678	132,068,812	132,068,992	132,069,133	132,069,271	132,069,682	132,069,760	132,069,962	132,070,083	132,070,568	132,070,608	132,070,777	132,070,931	132,071,101	132,071,921	132,071,974	132,072,029	132,072,512	132,072,522	132,072,748	132,072,783	132,073,333	132,073,354	132,073,374	132,073,475	132,073,669	132,073,808	132,073,987	132,074,070	132,074,099	132,074,130	132,074,271	132,074,304	132,075,012	132,075,132	132,075,402	132,075,597	132,076,162	132,076,318	132,076,625	132,076,893	132,076,994	132,077,069	132,077,137	132,077,377	132,077,409	132,077,434	132,077,460	132,077,467	132,078,366	132,078,660	132,078,848	132,079,072	132,079,464	132,079,465	132,079,667	132,079,925	132,080,074	132,080,075	132,080,149	132,080,463	132,080,534	132,080,543	132,080,545	132,080,611	132,081,008	132,081,113	132,081,228	132,081,356	132,081,378	132,081,418	132,081,696	132,082,062	132,082,286	132,082,478	132,082,727	132,082,931	132,082,995	132,083,000	132,083,219	132,083,284	132,083,497	132,083,654	132,083,679	132,083,739	132,084,210	132,084,216	132,084,521	132,085,465	132,085,652	132,085,770	132,085,995	132,086,215	132,086,217	132,086,221	132,086,458	132,086,715	132,086,864	132,087,596	132,087,825	132,088,158	132,088,267	132,088,976	132,089,499	132,089,507	132,089,573	132,089,826	132,089,834	132,090,164	132,090,352	132,090,436	132,090,481	132,090,741	132,090,743	132,090,882	132,091,063	132,091,094	132,091,095	132,091,716	132,092,101	132,093,376	132,093,656	132,094,216	132,094,348	132,094,503	132,094,504	132,094,616	132,094,627	132,094,762	132,095,101	132,095,179	132,095,571	132,095,963	132,096,006	132,096,010	132,096,011	132,096,391	132,096,461	132,096,481	132,099,391	132,099,519	132,100,252	132,100,457	132,101,204	132,101,206	132,101,208	132,101,210	132,101,591	132,102,761	132,103,018	132,103,037	132,103,745	132,103,748	132,105,027	132,105,200	132,105,226	132,105,833	132,106,497	132,106,821	132,108,699	132,109,335	132,109,408	132,109,761	132,110,434	132,111,243	132,111,309	132,111,806	132,112,679	132,112,992	132,113,683	132,113,952	132,114,423	132,114,737	132,114,783	132,115,654	132,118,049	132,118,095	132,118,408	132,118,526	132,118,733	132,119,073	132,119,231	132,119,239	132,119,260	132,119,354	132,119,838	132,119,978	132,120,252	132,120,254	132,120,356	132,120,441	132,121,143	132,121,323	132,121,324	132,121,403	132,121,405	132,121,496	132,124,593	132,126,982	132,127,022	132,127,363	132,127,451	132,127,650	132,127,664	132,127,776	132,128,003	132,128,389	132,128,696	132,129,256	132,129,360	132,129,367	132,129,546	132,129,818	132,130,506	132,130,736	132,131,617	132,131,901	132,132,020	132,132,257	132,133,136	132,133,198	132,133,251	132,133,819	132,133,821	132,135,056	132,135,298	132,135,652	132,135,709	132,136,513	132,136,599	132,136,613	132,136,911	132,136,923	132,137,217	132,137,327	132,137,749	132,137,987	132,138,090	132,138,552	132,139,230	132,139,611	132,139,632	132,139,646	132,139,981	132,140,163	132,140,902	132,140,967	132,140,986	132,141,070	132,141,170	132,141,710	132,142,160	132,142,181	132,142,471	132,142,684	132,143,008	132,143,049	132,143,659	132,143,788	132,143,918	132,144,249	132,144,253	132,144,302	132,144,332	132,144,843	132,144,851	132,144,956	132,146,274	132,147,452	132,147,593	132,148,009	132,148,010	132,148,149	132,148,151	132,148,153	132,148,669	132,148,784	132,149,082	132,149,121	132,149,353	132,149,639	132,151,907	132,152,731	132,153,238	132,153,979	132,154,142	132,154,202	132,154,207	132,154,221	132,154,421	132,154,717	132,154,759
A	C	C	C	G	T	A	A	-	G	C	T	G	A	C	A	C	-/G	C	T	A	G	-/A	C	T	A	C	G	2	2	A	A	G	A	G	T	G	A	C	A	A	A	G	T	A	6	-/C	4	T	A	2/-	A	C	G	C	G	A	T	T	C	4	T	T	T	G	A	T	G	T	G	A	C	T	T	C	G	T/-	T	C	A	T	G	-	G	T	A/G	T/-	T/-	-	G	A	T	-	T	A/-	-/A	A	A	C	C	C	-	C	G	G	T	G	T	T	G	A	C	-/3	-/8	A	T	T	A	A	G	A	T	G	A	T	A	T	-	C	T	-	C	T	C	A	G	C	7	A	4	T	T	-	C	G	C	G	G	C	A	C	G	G	33	C	G	G	T	-	C	C	G	G	A	T	T	-	-	-	A	-	C	C	A	A	T	-	8	G	T	-	T	C	T	-	G	A	T	C	G	T	A	C	T	-	-	G	C	T	C	T	G	C	T	-/A	A/-	A/-	G	G	T	T	T	T	-	C/-	A	C	C	G	A	G	G	C	T	C	G	A	9	T	T	T	G	C	T	T	G	G	C	G	A	G	C	G	-	A	G	T	G	G	T	A	T	C	A	6	T	A	G	A	G	T	C	-	14	A	C	C	G	C	C	T	C	G	T	36	A	C	G	T	A	A	C	C	G	G	G	G	-	T	C	A	C	C	C	-	G	-	T	G	C	9	-/A	A	C	T	G	C	G	C	A	T	A	G	-	A	8	G	G	C	G	C	T	C	-	G	G	-	T/-	G	T	8	-	A	T	2	4	G	C	G	C	2	G	18/-	-/A	-/A	C	T	G	T	A	G	G	C	T	T	G	T	C	G	C	G	A	C	A	T	T	T	C	T	G	A	-	C	-/G	-/G	G/-	C	C	C	C	A	G	A	A	A	A	G	T/G	G	T	A	A	C	A	C	C	T	G	A	A	A	-	C	C	A	6	-	C	7/-	C	C	A	-	G	T	T	T	G	A/-	G/-	G	G	C	A	C/-	C/-	-/C	C/-	G	G	-/G	C	G	C	G	A	-	T	G	G	T	G	C	T	T	C	-	C	-/T	G	-/T	48	A	G	G	C	A	-	G	17	C	G	C	T	A	3	G	C	?	T/G	8	2	G	9	-	C	G	C	G	T	G	C	C	G	G	G	T	4	G	T	G	G	A	G	A	C	A	G	A	-	G	A	G	A	-	C	-	C	G	C	A	A	T	A	C	C	A	C	T	C	G	G	G	T	G	T	T	T	A	A	-	G	C	G	C	C	2	-	-	C	T	C	C	G	C	C	T	C	C	G	2	C	G	G/-	-/G	G/-	A	A	G	T	65	T	T	-	T/A	-	8	T	G	A	C	A	T