Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 97,912 (bp)   Positions: 173
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LEXF3/Stm (2020) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
Scn5a
G
C
T
T
T
A
C
-
A
G
G
C
C
C
C
G
G
6
-
T
T
G
G
G
C
2
G
T
A
A
2
C
A
A
G
2
T
-
G
T
T
A
C
C
-
A
T
A
T
T
G
T
T
A
A
C
4
C
C
40
G
A
T
2
G
T
T
A
A
G
A
A
C
C
C
A
C
7
C
T
G
-
A
T
4
T
C
C
A
T
T
G
T
T
C
T
T
C
C
C
C
C
A
A
A
-
A
T
A
G
-
-
T
T
A
T
T
C
A
A
G
C
-
C
A
A
A
C
C
A
A
-
A
G
T
4
-
C
G
-
T
T
A
T
G
T
A
G
G
C
C
G
T
T
A
T
A
C
C
-
A
-
G
G
-
A
2
A
T
T
C
A
T
  119,221,387
  119,221,765
  119,221,951
  119,222,229
  119,222,563
  119,223,052
  119,223,173
  119,223,276
  119,223,331
  119,223,379
  119,223,832
  119,224,018
  119,224,909
  119,225,287
  119,225,553
  119,226,486
  119,226,909
  119,227,097
  119,227,944
  119,228,002
  119,228,377
  119,228,747
  119,229,411
  119,229,488
  119,230,140
  119,230,158
  119,230,166
  119,230,481
  119,230,985
  119,231,372
  119,231,586
  119,232,411
  119,232,661
  119,232,819
  119,233,620
  119,234,314
  119,234,506
  119,234,973
  119,236,053
  119,236,301
  119,236,739
  119,236,935
  119,237,914
  119,238,223
  119,239,046
  119,239,298
  119,239,703
  119,240,388
  119,240,862
  119,240,931
  119,242,031
  119,242,431
  119,242,437
  119,242,620
  119,242,681
  119,243,264
  119,244,115
  119,244,120
  119,244,122
  119,244,632
  119,244,651
  119,244,894
  119,244,973
  119,245,683
  119,246,024
  119,248,945
  119,250,227
  119,250,631
  119,256,160
  119,257,079
  119,257,429
  119,257,477
  119,258,312
  119,258,315
  119,258,414
  119,258,483
  119,260,348
  119,260,890
  119,262,244
  119,262,349
  119,262,730
  119,263,464
  119,264,133
  119,264,882
  119,265,261
  119,267,603
  119,268,076
  119,268,504
  119,268,934
  119,269,252
  119,270,150
  119,270,254
  119,270,283
  119,270,610
  119,270,717
  119,270,991
  119,270,998
  119,271,103
  119,271,136
  119,271,277
  119,271,330
  119,271,408
  119,271,503
  119,271,537
  119,271,885
  119,272,513
  119,272,562
  119,272,715
  119,272,863
  119,272,875
  119,274,794
  119,276,915
  119,278,960
  119,280,695
  119,283,005
  119,285,135
  119,285,533
  119,286,084
  119,286,672
  119,289,137
  119,289,447
  119,289,467
  119,289,964
  119,290,109
  119,290,319
  119,291,973
  119,292,368
  119,292,635
  119,293,066
  119,293,998
  119,294,004
  119,294,040
  119,294,044
  119,294,298
  119,295,143
  119,295,654
  119,295,921
  119,296,568
  119,298,552
  119,300,093
  119,300,624
  119,301,233
  119,302,224
  119,303,221
  119,303,406
  119,304,137
  119,304,496
  119,304,696
  119,304,713
  119,305,600
  119,305,871
  119,306,512
  119,306,615
  119,306,808
  119,308,032
  119,308,845
  119,308,931
  119,309,205
  119,310,772
  119,310,884
  119,311,096
  119,311,529
  119,311,567
  119,311,953
  119,312,295
  119,312,491
  119,312,889
  119,313,349
  119,314,239
  119,316,159
  119,316,501
  119,317,452
  119,317,757
C
G
C
C
C
G
T
21
G
A
A
T
T
T
T
A
C
6/-
T/A
G
G
T
A
A
G
-
A
C
G
G
-
T
G
G
A
-
C
8
A
C
G
C
T
A
C
G
C
G
A
C
A
G
C
G
G
T
-
C/T
C/T
-
-/A
T
C
-
A
C
C
G
T
A
-/T
T
T
T
T
G
-/T
-
A
-
A
T
T
A
-
C
T
T/-
G
C
C
A
C
C
T
C
C
T
T
T
T
T
T
G
G
G
G
C
C
A
2
2
C
C
G
C
C
T
G
C
A
T
G
T
G
G
G
A
T
A/G
A/T
-/4
A/C
T
C
-
4
T
A
2
C
C
G
C
A
C
G
A
A
T
-
T
C
G
T
C
G
A
T
A
T
A
A
A
A
G
-
G
C
C
-
G
C