Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 139,209 (bp)   Positions: 226
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
MWF/Hsd (2019) 
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
Retreg1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC108349967
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
T
A
T
-
G
T
C
T
-
T
T
C
A
G
A
A
-
A
T
T
T
C
A
2
A
C
4
T
G
G
2
C
T
G
-
A
G
A
T
5
A
G
T
A
C
C
A
A
T
T
-
C
C
A
-
A
A
A
A
A
A
T
A
T
C
G
G
C
G
T
A
T
A
C
A
3
C
G
C
C
T
C
G
T
T
C
A
G
C
T
A
A
G
C
T
T
T
-
A
G
T
A
2
T
T
G
G
C
C
T
A
G
G
G
-
T
G
T
2
G
16
T
C
-
C
A
G
G
G
A
T
T
G
C
T
-
4
T
G
-
A
C
T
G
C
G
C
C
T
C
T
G
T
T
T
G
A
A
T
-
G
C
A
-
-
A
G
G
-
T
C
C
G
-
C
T
C
G
G
C
A
T
G
C
G
A
C
C
T
T
G
A
A
T
C
G
A
C
T
C
T
C
-
A
A
C
T
C
T
A
C
G
4
T
A
T
C
C
A
T
G
-
-
A
T
  76,335,653
  76,336,915
  76,337,193
  76,338,751
  76,339,162
  76,339,466
  76,339,757
  76,340,694
  76,341,685
  76,343,858
  76,343,909
  76,344,587
  76,346,055
  76,347,169
  76,347,247
  76,348,945
  76,349,043
  76,349,812
  76,350,512
  76,350,534
  76,350,700
  76,350,896
  76,352,267
  76,352,631
  76,352,959
  76,353,080
  76,353,091
  76,353,111
  76,353,287
  76,353,492
  76,354,079
  76,354,090
  76,357,989
  76,358,038
  76,358,104
  76,358,478
  76,359,232
  76,359,400
  76,359,765
  76,362,262
  76,365,459
  76,366,539
  76,366,630
  76,366,907
  76,367,396
  76,368,598
  76,368,694
  76,369,278
  76,369,331
  76,369,587
  76,370,971
  76,371,347
  76,371,553
  76,372,220
  76,372,937
  76,372,962
  76,373,201
  76,373,203
  76,373,205
  76,373,833
  76,374,568
  76,374,928
  76,375,845
  76,377,293
  76,377,331
  76,377,452
  76,378,012
  76,378,223
  76,378,960
  76,381,231
  76,381,530
  76,381,876
  76,382,664
  76,382,684
  76,382,717
  76,382,737
  76,383,102
  76,383,622
  76,383,952
  76,384,655
  76,384,736
  76,385,037
  76,385,115
  76,385,982
  76,386,137
  76,386,247
  76,386,720
  76,387,050
  76,387,163
  76,387,224
  76,387,384
  76,387,609
  76,387,887
  76,388,185
  76,388,378
  76,388,525
  76,388,978
  76,389,476
  76,389,903
  76,392,079
  76,392,222
  76,392,635
  76,393,428
  76,396,461
  76,396,487
  76,397,633
  76,398,235
  76,399,143
  76,399,331
  76,399,905
  76,399,920
  76,399,925
  76,401,216
  76,401,218
  76,401,295
  76,401,982
  76,402,608
  76,402,939
  76,403,149
  76,403,350
  76,403,840
  76,404,578
  76,404,709
  76,405,845
  76,406,108
  76,406,360
  76,406,548
  76,406,549
  76,406,550
  76,406,553
  76,406,659
  76,407,940
  76,410,579
  76,410,904
  76,412,137
  76,412,371
  76,414,620
  76,415,302
  76,415,463
  76,415,628
  76,416,472
  76,416,493
  76,416,651
  76,416,688
  76,416,714
  76,416,886
  76,416,952
  76,417,124
  76,417,175
  76,417,219
  76,417,883
  76,417,960
  76,418,274
  76,418,286
  76,418,743
  76,419,062
  76,419,703
  76,420,029
  76,420,082
  76,420,161
  76,420,163
  76,420,193
  76,420,665
  76,420,687
  76,421,144
  76,421,810
  76,422,184
  76,422,703
  76,423,095
  76,423,133
  76,423,470
  76,423,695
  76,423,769
  76,423,823
  76,423,846
  76,423,859
  76,424,072
  76,424,505
  76,425,904
  76,425,996
  76,426,067
  76,426,093
  76,426,153
  76,426,374
  76,426,478
  76,426,494
  76,426,496
  76,426,500
  76,427,795
  76,428,549
  76,428,619
  76,428,741
  76,429,982
  76,431,723
  76,432,170
  76,432,400
  76,432,817
  76,432,886
  76,433,406
  76,433,718
  76,433,901
  76,433,905
  76,434,309
  76,434,712
  76,436,656
  76,438,589
  76,438,970
  76,439,898
  76,442,452
  76,442,960
  76,444,772
  76,444,904
  76,447,482
  76,448,395
  76,448,400
  76,448,494
  76,454,137
  76,455,547
  76,456,914
  76,457,110
  76,458,794
  76,459,381
  76,461,235
  76,470,584
  76,472,492
  76,474,205
A
-
G
A
3
A
C
T
-
5
A
C
T
G
A
G
G
T
G
C
C
G
G
G
-
T
-
-
C
A
G/C
2/-
T
C
A
G
G
T
T
G
-
G
A
G
G
T
A
T
G
C
-
C
T
T
T
4
T
T
T
C
-
G
C
G
C
T
A
A
T
-
A
G
C
G
G
G
-
T
A
T
A
C
T
T
C
C
T
G
A
T
-
G
G
A
T
C
G
C
C
G
A
-
G
-
C
C
A
A
T
T
C
A/G
A
A
A
A
C
C
C
-
T
-
C
T
13
T
C
C
T
-
G
C
C
A
A
A
4
-
C
A
3
T
A
G
C
T
C
T
T
C
T
C
-
-
-
C
T
T
G
G
6
A
T
T
2
2
C
A
T
5
A
A
A
A
T
T
G
-
A
A
-
C
A
A
T
A
C
T
T
-
C
T
G
G
A
G
A
G
T
C
T
C
T
C
-
T
T
-
T
C
C
T
A
-
C
T
C
A
T
-
C
T
2
G
G
-