Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly mRatBN7.2

Genes ( + )

Genes ( - )

mRatBN7.2


Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1										Oxr1
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	LOC120093810										LOC120093810									--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
G	G	G	C	A	115	T	T	G	T	C	T	T	G	C	C	A	A	A	A	T	G	A	T	C	C	-	C	G	T	A	C	C	A	-	T	C	C	A	C	T	T	C	C	-	T	T	A	-	C	T	T	C	A	G	T	G	C	C	G	A	C	G	G	T	A	T	C	A	A	T	C	8	T	G	-	G	G	T	A	T	A	G	A	22	A	-	2	G	T	T	T	G	C	G	G	T	C	T	8	C	4	C	C	4	C	T	T	G	T	A	A	A	T	T	C	C	C	T	T	T	A	G	-	G	C	11	T	A	G	C	C	A	A	C	C	A	-	18	A	A	A	C	G	T	C	C	4	A	G	A	2	G	G	G	G	C	A	A	-	A	T	3	-	T	C	A	-	C	C	A	-	G	G	G	G	A	C	2	T	C	G	T	G	G	G	C	T	T	T	G	G	A	T	G	C	G	G	T	A	T	T	A	A	T	-	-	C	A	G	A	T	C	C	C	T	C	G	A	A	A	G	G	T	C	C	G	T	T	C	A	A	C	G	C	C	G	C	A	A	A	G	C	C	C	A	G	G	C	-	T	C	C	C	G	A	G	A	A	G	A	A	-	G	-	G	G	G	G	G	T	C	T	T	A	T	-	-	A	C	C	C	C	G	A	G	C	A	A	C	C	T	T	C	T	A	G	G	G	C	T	C	A	A	C	A	C	G	A	A	A	G	G	A	-	G	C	A	A	C	T	A	G	G	T	T	G	A	A	A	T	-	G	A	C	G	C	C	A	-	A	T	G	A	T	G	G	A	T	G	T	G	-	2	A	A	C	T	T	C	A	C	C	A	T	A	T	C	A	G	T	A	A	A	T	T	A	A	T	A	C	C	C	A	G	G	C	A	G	T	T	T	C	G	C	C	A	A	G	-	A	G	T	A	A	G	C	A	G	G	G	A	G	C	C	-	A	C	G	A	G	-	C	2	C	G	T	T	G	G	-	T	C	C	T	C	T	C	A	A	A	A	A	A	G	C	C	G	T	A	C	A	T	A	C	-	C	G	G	T	G	C	4	C	C	A	-	A	G	C	T	-	T	G	G	2	G	-	G	A	6	C	G	T	C	A	G	A	T	C	T	A	A	T	C	T	A	A	T	A	C	G	C	A	C	A	A	G	G	T	T	A	C	G	G	C	-	G	A	A	C	T	G	G	C	T	A	A	A	C	C	T	A	T	8	C	C	G	G	G	C	T	C	-	C	C	T	A	A	A	C	T	-	A	A	T	T	G	T	A	C	T	20	A	A	T	A	T	A	T	-	-	-	G	A	A	T	A	G	C	4	T	C	G	A	C	A	A	C	6	A	C	A	G	T	T	T	5	-	G	G	G	91	C	T	C	T	T	G	A	C	-	C	C	A	T	C	T	T	A	G	T	G	T	C	A	G	T	A	C	T	T	A	-	G	C	T	C	G	T	G	A	G	C	A	G	T	T	C	T	T	A	-	A	C	G	G	A	C	T	-	T	-	C	G	-	A	G	A	A	A	A	G	G	T	T	C	T	G	T	T	T	T	T	4	A	T	-	T	C	G	4	T	T	-	T	A	A	T	C	T	4	T	G	A	-	C	C	C	-	C	-	A	A	A	C	G	-	T	T	-	C	C	T	A	A	T	G	G	C	A
72,530,859	72,530,935	72,531,877	72,533,664	72,533,729	72,535,519	72,536,367	72,537,054	72,537,514	72,540,299	72,540,704	72,541,075	72,541,131	72,541,313	72,541,524	72,541,648	72,541,779	72,541,781	72,542,037	72,542,393	72,542,480	72,542,481	72,544,876	72,546,346	72,546,952	72,547,542	72,547,729	72,549,034	72,550,061	72,550,540	72,550,599	72,550,919	72,551,140	72,551,310	72,551,476	72,551,931	72,552,672	72,553,933	72,555,089	72,556,670	72,558,175	72,558,458	72,558,479	72,558,971	72,559,515	72,560,434	72,560,842	72,561,158	72,562,922	72,563,458	72,563,595	72,564,302	72,565,417	72,567,201	72,567,764	72,568,383	72,569,258	72,569,436	72,572,660	72,574,761	72,576,559	72,576,782	72,578,706	72,578,970	72,581,842	72,581,848	72,583,922	72,584,028	72,585,716	72,585,793	72,586,361	72,588,795	72,589,059	72,589,074	72,591,693	72,592,556	72,593,664	72,593,841	72,596,464	72,598,829	72,602,224	72,602,322	72,602,848	72,603,934	72,603,937	72,605,921	72,606,473	72,609,175	72,609,423	72,609,751	72,609,843	72,609,985	72,611,006	72,613,030	72,613,063	72,613,439	72,613,847	72,614,428	72,614,436	72,614,441	72,614,506	72,614,609	72,614,612	72,614,616	72,614,625	72,614,664	72,616,460	72,616,503	72,617,331	72,618,399	72,619,283	72,619,544	72,621,049	72,621,725	72,622,163	72,622,253	72,622,259	72,622,265	72,622,274	72,622,286	72,622,292	72,622,612	72,622,623	72,624,333	72,626,219	72,627,034	72,627,061	72,628,664	72,629,153	72,630,330	72,631,577	72,633,745	72,636,347	72,637,259	72,638,076	72,639,749	72,640,615	72,641,207	72,641,910	72,644,119	72,644,764	72,645,174	72,645,792	72,648,151	72,648,754	72,654,440	72,654,477	72,660,114	72,660,485	72,662,202	72,662,693	72,663,341	72,663,711	72,664,283	72,668,302	72,668,903	72,669,845	72,669,868	72,669,870	72,669,979	72,672,049	72,672,660	72,672,788	72,674,194	72,675,550	72,675,722	72,679,040	72,679,528	72,680,231	72,681,314	72,681,347	72,681,821	72,682,155	72,682,446	72,682,698	72,682,712	72,683,287	72,683,430	72,683,699	72,683,905	72,683,937	72,684,219	72,684,707	72,684,914	72,685,454	72,685,491	72,688,915	72,690,110	72,690,665	72,690,854	72,690,865	72,690,869	72,690,870	72,691,021	72,691,554	72,691,963	72,692,292	72,693,514	72,694,225	72,695,166	72,695,567	72,695,748	72,695,982	72,696,225	72,696,353	72,696,554	72,696,785	72,696,795	72,696,845	72,697,060	72,697,097	72,697,184	72,697,272	72,697,287	72,697,676	72,697,688	72,697,706	72,697,853	72,697,855	72,698,229	72,698,484	72,698,518	72,698,761	72,699,028	72,699,269	72,699,462	72,699,492	72,699,592	72,699,595	72,699,605	72,699,637	72,699,640	72,699,653	72,700,294	72,700,489	72,700,644	72,700,854	72,700,907	72,700,918	72,701,018	72,701,067	72,701,149	72,701,308	72,701,322	72,701,336	72,702,230	72,702,337	72,702,441	72,702,794	72,703,117	72,703,118	72,703,160	72,703,623	72,703,648	72,703,657	72,703,711	72,704,508	72,704,963	72,704,980	72,705,603	72,707,219	72,707,867	72,708,421	72,708,727	72,708,889	72,708,911	72,708,913	72,708,915	72,708,917	72,708,927	72,712,423	72,713,304	72,713,969	72,715,375	72,718,291	72,720,012	72,721,041	72,721,449	72,723,614	72,729,588	72,730,503	72,730,527	72,730,559	72,730,797	72,730,827	72,731,163	72,731,696	72,731,703	72,731,944	72,732,058	72,732,217	72,732,450	72,732,791	72,732,824	72,732,854	72,732,874	72,732,987	72,733,224	72,733,251	72,733,415	72,733,475	72,733,493	72,733,577	72,733,578	72,733,599	72,733,663	72,733,682	72,733,706	72,733,716	72,740,253	72,740,265	72,740,292	72,740,396	72,740,525	72,740,553	72,740,707	72,740,925	72,741,183	72,741,312	72,741,410	72,741,568	72,741,932	72,741,987	72,742,137	72,742,631	72,742,722	72,743,027	72,743,826	72,743,942	72,744,142	72,744,967	72,745,032	72,745,049	72,745,214	72,747,417	72,747,427	72,747,866	72,748,066	72,748,135	72,748,311	72,748,359	72,748,468	72,748,509	72,748,566	72,748,598	72,748,599	72,749,030	72,749,158	72,749,726	72,750,046	72,750,199	72,751,210	72,751,341	72,751,410	72,751,778	72,752,296	72,752,403	72,753,351	72,754,146	72,754,152	72,754,153	72,754,163	72,754,870	72,755,603	72,756,111	72,756,323	72,756,600	72,757,633	72,758,393	72,758,628	72,759,074	72,759,199	72,759,328	72,760,142	72,761,348	72,761,457	72,761,523	72,761,718	72,761,832	72,761,840	72,761,860	72,762,124	72,762,522	72,762,815	72,763,311	72,764,357	72,764,386	72,764,786	72,765,032	72,765,050	72,765,182	72,766,080	72,768,263	72,768,370	72,768,479	72,769,725	72,769,767	72,773,932	72,778,006	72,779,170	72,780,154	72,781,571	72,782,889	72,782,926	72,784,367	72,784,776	72,786,033	72,787,453	72,787,455	72,787,457	72,787,459	72,787,576	72,787,939	72,789,373	72,789,421	72,789,578	72,790,030	72,790,175	72,790,679	72,790,721	72,791,287	72,792,433	72,793,755	72,795,628	72,795,889	72,795,917	72,799,188	72,802,746	72,804,160	72,805,846	72,806,029	72,807,745	72,807,853	72,811,612	72,815,212	72,815,709	72,816,497	72,818,974	72,819,827	72,819,829	72,819,831	72,819,833	72,819,835	72,820,866	72,822,456	72,823,278	72,824,324	72,824,396	72,824,858	72,826,120	72,826,197	72,830,469	72,831,192	72,831,741	72,832,240	72,832,383	72,832,659	72,833,106	72,833,701	72,833,718	72,833,719	72,833,743	72,833,888	72,834,071	72,834,753	72,835,083	72,835,665	72,836,193	72,836,596	72,837,132	72,837,314	72,837,470	72,837,523	72,837,585	72,838,352	72,838,561	72,838,565	72,839,098	72,839,598	72,839,698	72,840,002	72,840,279	72,841,089	72,841,095	72,841,193	72,841,500	72,841,530	72,843,214	72,843,475	72,843,724	72,843,790	72,844,146	72,844,535	72,844,780	72,844,784	72,844,996	72,845,095	72,845,370	72,845,445	72,846,159	72,846,306	72,846,437	72,846,571	72,846,663	72,846,800	72,846,884	72,847,065	72,847,223	72,847,457	72,847,594	72,847,815	72,847,881	72,847,909	72,847,935	72,847,974	72,848,679	72,849,363	72,849,399	72,849,523	72,849,571	72,849,892	72,850,040	72,850,154	72,850,686	72,850,746	72,850,916	72,850,958	72,850,982	72,851,008	72,851,019	72,851,156	72,851,856	72,851,943	72,852,586	72,852,640	72,852,773	72,853,082	72,853,123	72,853,218	72,853,423	72,853,608	72,853,803	72,853,901	72,853,955	72,853,960	72,854,030	72,854,241	72,854,267	72,854,404	72,854,532	72,854,613	72,854,718	72,855,393	72,855,420	72,855,607	72,855,814	72,855,917	72,855,940	72,855,964	72,856,042	72,856,397	72,856,632	72,856,759	72,856,943	72,856,951	72,857,133	72,857,169	72,857,182	72,857,210	72,857,528	72,857,609	72,858,078	72,858,115	72,858,174	72,858,313	72,858,349	72,858,551	72,858,602	72,858,841	72,861,131	72,862,235	72,862,806	72,869,499	72,870,197	72,870,416	72,870,633	72,870,693	72,870,894	72,871,009	72,871,064	72,871,069	72,871,113	72,872,329	72,873,026	72,873,490	72,873,491	72,873,532	72,873,899	72,874,006	72,874,722	72,875,132	72,875,590	72,876,095	72,877,752	72,877,995	72,878,299	72,879,058	72,881,010	72,881,104	72,881,200	72,883,601	72,884,619	72,884,765	72,886,108	72,886,729	72,887,159	72,888,072	72,889,079	72,889,417	72,891,052	72,891,491	72,891,966	72,892,049	72,892,394	72,892,616	72,892,617	72,893,099	72,893,681	72,894,412	72,894,512	72,896,427	72,898,184	72,901,590	72,901,895	72,901,921	72,902,770	72,903,886	72,906,221	72,906,333	72,906,521	72,906,657	72,907,007	72,907,358	72,908,161	72,910,285	72,910,746	72,911,366	72,911,453	72,911,478	72,913,810	72,914,693	72,914,763	72,915,569	72,916,542	72,917,176	72,917,221	72,917,947	72,917,962	72,918,007	72,918,041	72,918,305	72,918,441	72,918,955	72,919,444	72,921,256	72,921,486	72,921,498	72,921,830	72,922,089	72,922,118	72,922,277	72,922,499	72,922,839	72,922,901	72,923,954	72,923,955	72,923,970	72,925,460	72,926,739	72,926,775	72,927,733	72,927,734	72,927,736	72,927,737	72,927,930	72,929,528	72,929,635	72,929,960	72,930,694	72,930,698	72,930,961	72,931,136	72,931,278	72,931,895	72,932,377	72,933,394	72,933,589	72,934,303	72,934,585	72,937,080	72,940,083	72,942,144	72,942,804	72,942,818	72,942,822	72,943,837	72,944,392	72,944,393	72,945,001	72,946,683	72,948,086	72,948,369	72,950,226	72,952,224	72,952,741	72,952,796	72,952,914	72,954,813	72,954,818	72,957,018	72,957,033	72,960,098	72,960,223	72,961,748	72,962,051	72,962,317	72,962,340	72,963,047	72,964,428	72,965,149	72,965,484
A	A	A	T	T	-	C	-	T	C	T	G	C	A	T	T	-/T	-/T	G	G	C	A	G	C	T	A	A	T	A	C	T	A	T	C	64	A	G	G	G	T	A	G	T	A	4	C	C	C/-	2	T	C	G	T	C	A	A	A	T	T	A	G	T	C	A	C	G	C	T	G	G	C	T	-	-	C	C	A	A	A	G	C	G	A	-	-	G	8	2/-	A	C	C	C	A	T	A	T	C	T	C	8/-	C/T	-	-/T	T/-	-	C/T	C	C	A	C	T	C	G	-/C	C	T	T	T	C	C	T/C	G	A	T	A	A	-	-	G	A	T	-	G	C	G	G	G	T	-	-	T	T	G	T	A	T	T	-	C	A	G	-	A	A	T	C	-/T	G	G	T	G	A/G	-	A	A	A	G	6	T	A	G	T	A	T	C	A	C	T	-	C/-	T/-	A	C	A	C	C	T	C	C	A	A	T	T	C	A	T	A	A	C	G	C	C	C	G	C	G	2	T	G	A	G	C	T	T	-	C	A	A	G	G	G	A	T	C	A	T	T	A	A	T	-/T	T	T	A	T	T	A	T	G	T	C	A	G	G	G	G	A	A	T	-/2	T/C	G/-	T	A	A	G	T	-	G	A	G	G	C	A	2	C/-	-/C	C/-	-/C	C/-	G	A	-	-	G	-	-/4	T	G	T	T	T	T	A	G	A	T	G	G	G	G	C	A	G	C	-	C	T	T	A	C	T	T/-	T	T	C	T	C	C	A/G	G	C	C	G	C	A	G	G	G	G	C	G	A	A	C	A	A	G	G	G	C	2	C	-	T	T	T	T	G	3	G	C	A	G	C	A	A	G	C	A	C	A	8	-	G	G	T	G	T/A	C/T	A/G	C/T	T	G	C	T	-	T	G	A	C	G	C	G	C	G/-	G	G	A	G	T	T	A	G	A	T	T	G	A	C	C	C	A	A	G	A	T	G	A	A	G	A	C	C	G	A	G	?	-/C	C/-	-/C	G	A	T	T	23	C	T	A	-	A	2	T	-	G	A	G	A/-	A	-	A	C	T	T	C	A	C	T	-/T	T/-	-/T	T/-	-/T	G	C	T	T	A	-	T	A	G	-	G	T	3	G	A	A	C	A	T	-	T	T	G	6	T	A	T	C	T	C	A	A	-	-/A	2	A	T	-	T	T	C	A	G	C	G	C	T	C	G	G	C	T	G	-	G	C	T	T	C	A	T	T	G	G	A	A	C	-	G	A	A	A	T	3	A	G	G	G	C	A	A	A	-	G	T	G	T	T	C	G	-	-	T	T	A	T	T	T	C	T	T	T	T	C	G	-	G	T	C	G	G	G	A	-	A	G	C	T	C	-	C	T	G	G	-	G	A	A	C	T	A	G	C	C	T	A	T	-	G	T	A	G	T	G	G	-/G	6/-	C/-	T	C	A	C	C	C	-	C	T	T	C	-	T	-	-	C	C	A	T	T	2	T	T	G	C	T	C	A	G	C	G	A	C	T	G	A	A	C	A	A	G	G	G	A	T	-	T	A	G	C	G	A	T	T	-	G	G	T	C	C	G	2	G	T	C	T	G	A	A	A	G	3	T/-	A	G	G	A	G	G	G	C	C	A	A	A	T	C	A	A	T/C	T/C	T/C	T/C	-	C	A	C	C	T	T	-	-	C	2	C	G	T	G	T	A	-	T/C	G/T	A/C	19	G	T	T	4	T	T	T/-	C	C	G	C	A	A	G/-	6	T	T	C/-	G	G	C	A	C	G	T