Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 50,680 (bp)   Positions: 143
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LEXF1C/Stm (2019) 
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
Optn
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
C
4
T
A
A
A
C
C
C
G
A
A
C
C
-
T
-
T
A
T
T
T
G
T
13
C
-
2
C
G
G
G
A
A
A
A
-
C
C
-
-
C
T
G
A
A
G
C
A
A
C
T
-
-
A
A
G
T
T
-
T
G
A
T
C
C
C
-
A
T
T
G
T
4
C
T
T
-
T
A
T
T
T
C
C
G
T
-
4
T
G
G
T
T
C
G
G
G
8
-
A
A
4
T
T
A
T
A
A
-
-
G
2
T
G
C
T
A
G
A
C
C
C
G
C
C
C
C
G
C
C
A
T
G
T
G
T
A
C
A
A
  73,211,634
  73,212,099
  73,214,108
  73,214,115
  73,214,200
  73,214,327
  73,215,095
  73,218,067
  73,220,093
  73,220,408
  73,221,296
  73,222,368
  73,223,037
  73,223,295
  73,223,852
  73,224,067
  73,224,383
  73,225,186
  73,225,227
  73,225,722
  73,225,761
  73,225,798
  73,225,854
  73,226,203
  73,226,263
  73,226,364
  73,226,393
  73,226,433
  73,226,504
  73,226,524
  73,226,525
  73,226,533
  73,226,537
  73,226,577
  73,226,579
  73,226,779
  73,226,905
  73,226,982
  73,227,098
  73,227,116
  73,227,248
  73,227,345
  73,227,375
  73,227,447
  73,227,507
  73,227,718
  73,227,755
  73,227,759
  73,227,848
  73,227,892
  73,227,894
  73,227,900
  73,227,997
  73,228,007
  73,228,177
  73,229,601
  73,229,728
  73,230,148
  73,230,151
  73,230,163
  73,230,379
  73,230,394
  73,230,400
  73,230,651
  73,230,747
  73,230,806
  73,230,837
  73,230,839
  73,231,238
  73,231,252
  73,231,527
  73,232,263
  73,232,264
  73,232,998
  73,233,873
  73,234,041
  73,234,076
  73,234,733
  73,234,969
  73,235,077
  73,235,125
  73,235,398
  73,235,412
  73,235,422
  73,236,025
  73,236,275
  73,237,179
  73,237,336
  73,238,222
  73,238,693
  73,238,738
  73,238,802
  73,238,915
  73,238,932
  73,239,002
  73,239,024
  73,239,211
  73,239,501
  73,239,642
  73,239,727
  73,240,128
  73,240,554
  73,240,613
  73,240,614
  73,240,990
  73,241,029
  73,241,073
  73,241,255
  73,241,439
  73,242,792
  73,243,230
  73,243,256
  73,244,808
  73,245,380
  73,245,766
  73,245,894
  73,246,176
  73,246,534
  73,246,606
  73,247,018
  73,247,369
  73,248,125
  73,248,183
  73,250,402
  73,250,416
  73,250,422
  73,250,425
  73,250,437
  73,250,468
  73,250,502
  73,250,503
  73,250,520
  73,250,566
  73,251,691
  73,252,202
  73,252,263
  73,252,413
  73,254,418
  73,255,167
  73,256,233
  73,257,459
  73,258,713
  73,259,478
T
A
G
-
C
G
G
G
-/A
T
T
A
G
C
T
A
22
C
10
G
G
G
C
C
T
G
-
T
2
-
-/G
A
-/C
C
G
G
T
G
4
T
-
G
3
T
A
A
-
T
T
T
C
C
T
A
24
3
G
G
A
C
C
5
C
A
G
-
T
T
T
G
G
-
G
A
C
-
T
C
C
4
C
T/-
-/A
A/-
G
T
T
A
C
T
-
C
A
T
C
C
T
A
C
A
-
A
-
C
-
C
C
G
C
T
G
3
4
A
-
C
A
C/T
C/G
-
T
T
T
C/T
C/T
C/A
C/T
C/G
C/T
C/T
G/A
C/T
T
G
C
A
C
A
C
G
T
T
C/-