Variant Visualizer (Variants)

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Sequence Annotation

Assembly mRatBN7.2

Genes ( + )

Genes ( - )

mRatBN7.2

HXB4/IpcvMcwi (2020)


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A	A	A	-	G	G	G	G	G	A	T	5	G	A	G	T	C	G	T	A	G	G	G	4	T	G	C	T	T	C	T	6	-	T	A	A	T	T	A	G	A	A	G	A	T	C	G	G	T	T	C	-	C	C	A	C	C	C	-	C	6	A	G	G	C	C	-	T	C	T	G	-	G	A	C	A	T	G	-	A	A	T	C	-	T	T	C	G	T	-	A	T	A	T	T	A	T	C	T	T	C	T	G	C	A	C	T	C	C	2	G	C	G	G	-	G	A	G	G	G	-	G	C	C	-	G	C	G	T	T	T	G	A	C	C	G	4	C	A	G	C	-	-	A	A	C	G	C	A	G	A	G	G	C	2	A	A	T	C	G	T	A	-	A	A	T	G	T	2	A	A	T	T	-	T	-	T	T	A	G	2	A	T	T	C	2	T	G	T	T	A	T	G	C	-	C	G	G	C	C	G	T	2	G	G	T	C	A	A	114	T	9	C	A	C	C	G	A	G	-	G	C	C	C	-	C	-	A	G	C	A	T	G	2	G	T	C	-	G	C	G	T	G	A	A	T	A	-	-	T	-	G	A	T	G	G	C	A	A	A	A	G	T	A	C	-	G	T	C	G	T	A	G	T	C	C	T	T	A	-	A	G	T	G	A	T	T	G	C	C	C	-	C	A	G	C	-	C	C	2	T	C	A	A	T	T	C	-	-	-	4	G	-	A	C	A	G	T	A	-	T	A	T	A	C	C	T	T	A	A	G	T	A	G	A	G	A	A	A	T	T	A	C	T	A	C	G	C	G	C	T	A	T	A	A	T	T	G	G	T	-	A	T	G	T	A	T	T	A	T	A	A	-	C	A	A	T	T	A	G	G	T	G	A	C	A	T	C	C	A	G	A	T	G	-	-	A	A	C	G	A	A	T	G	C	T	T	T	G	A	C	T	T	G	A	-	C	-	T	T	C	T	T	T	G	C	A	A	T	-	T	A	T	A	C	G	C	A	A	-	G	G	G	C	6	A	-	A	G	A	G	-	C	T	G	G	C	A	A	G	A	G	G	T	C	A	T	C	C	-	T	C	A	G	A	C	C	G	-	C	G	A	G	T	C	T	A	-	C	T	C	A	G	A	G	G	G	T	3	A	-	G	C	T	C	3	G	A	34	A	G	A	T	C	T	C	A	C	T	G	A	108	G	T	G	T	C	A	A	T	A	C	A	A	C	G	C	A	109	C	A	A	G	-	C	G	-	A
82,561,150	82,561,523	82,561,827	82,562,385	82,563,199	82,563,200	82,563,341	82,563,455	82,563,528	82,563,648	82,563,764	82,564,139	82,564,232	82,564,786	82,566,033	82,566,336	82,566,593	82,567,376	82,568,102	82,568,180	82,568,240	82,568,299	82,568,373	82,569,253	82,569,743	82,569,922	82,570,101	82,570,298	82,570,430	82,570,511	82,570,557	82,570,811	82,570,843	82,570,984	82,570,992	82,571,138	82,571,257	82,571,282	82,571,550	82,571,672	82,571,690	82,571,749	82,572,084	82,572,152	82,572,566	82,573,336	82,573,847	82,573,852	82,574,301	82,575,465	82,575,529	82,576,074	82,578,988	82,580,214	82,580,696	82,582,049	82,582,569	82,584,513	82,585,445	82,585,452	82,585,525	82,585,964	82,586,064	82,586,393	82,588,218	82,590,204	82,590,279	82,590,689	82,590,721	82,590,886	82,592,498	82,593,419	82,593,421	82,593,422	82,594,258	82,594,624	82,595,257	82,595,409	82,595,511	82,595,519	82,595,571	82,595,856	82,595,913	82,595,916	82,595,918	82,596,100	82,596,295	82,596,318	82,597,070	82,597,123	82,597,466	82,597,477	82,597,687	82,598,764	82,598,898	82,599,024	82,599,595	82,599,874	82,600,708	82,600,860	82,601,010	82,601,649	82,602,948	82,603,073	82,603,284	82,603,447	82,603,507	82,605,040	82,605,093	82,605,640	82,605,802	82,606,216	82,606,220	82,606,295	82,606,705	82,606,726	82,607,630	82,607,765	82,607,851	82,608,055	82,608,081	82,608,190	82,608,428	82,608,990	82,609,012	82,609,027	82,609,286	82,609,302	82,609,569	82,610,004	82,610,275	82,610,397	82,611,235	82,611,339	82,611,772	82,612,185	82,612,324	82,612,333	82,612,476	82,612,646	82,612,938	82,613,088	82,613,096	82,613,123	82,613,126	82,613,310	82,613,545	82,613,711	82,613,998	82,614,073	82,614,089	82,614,123	82,614,161	82,614,273	82,615,085	82,616,336	82,616,619	82,616,678	82,616,783	82,616,907	82,616,908	82,616,915	82,616,922	82,616,938	82,616,940	82,616,990	82,617,062	82,617,149	82,617,513	82,617,549	82,617,568	82,617,610	82,617,629	82,617,869	82,618,186	82,618,234	82,618,259	82,618,290	82,618,443	82,618,475	82,618,566	82,618,720	82,618,781	82,618,794	82,618,811	82,618,849	82,618,905	82,618,906	82,618,925	82,618,959	82,619,093	82,619,903	82,619,926	82,620,588	82,620,692	82,621,869	82,624,981	82,625,956	82,627,473	82,627,824	82,628,094	82,628,715	82,628,779	82,629,009	82,629,323	82,629,725	82,630,307	82,630,311	82,630,354	82,630,791	82,631,879	82,632,233	82,633,149	82,633,601	82,633,633	82,635,304	82,636,325	82,637,543	82,638,023	82,638,260	82,639,664	82,640,259	82,641,092	82,641,583	82,641,822	82,641,867	82,641,884	82,644,452	82,644,459	82,644,923	82,645,257	82,645,316	82,645,918	82,645,934	82,645,935	82,646,195	82,646,387	82,646,594	82,648,779	82,649,622	82,649,672	82,649,959	82,650,343	82,650,517	82,650,599	82,650,816	82,651,662	82,654,500	82,654,503	82,654,531	82,654,535	82,654,541	82,654,553	82,654,558	82,655,015	82,656,358	82,656,459	82,657,242	82,657,244	82,657,246	82,658,156	82,659,523	82,661,144	82,661,407	82,661,515	82,661,750	82,661,880	82,661,882	82,661,973	82,661,987	82,663,049	82,663,115	82,664,021	82,665,776	82,672,222	82,674,373	82,676,617	82,678,139	82,679,656	82,680,278	82,680,986	82,681,211	82,681,737	82,683,042	82,683,387	82,683,802	82,684,147	82,684,148	82,684,854	82,684,858	82,686,841	82,686,864	82,687,969	82,688,588	82,690,070	82,691,423	82,692,138	82,692,948	82,692,974	82,694,212	82,695,217	82,697,177	82,697,728	82,698,569	82,699,294	82,701,332	82,702,550	82,702,768	82,702,769	82,703,943	82,704,006	82,704,740	82,705,604	82,706,679	82,710,563	82,711,422	82,711,978	82,712,827	82,713,065	82,717,526	82,717,798	82,719,332	82,722,366	82,723,374	82,726,167	82,728,295	82,731,770	82,732,046	82,732,786	82,733,314	82,733,332	82,733,459	82,733,795	82,734,384	82,736,461	82,737,014	82,737,067	82,737,261	82,737,301	82,737,391	82,737,597	82,739,491	82,739,716	82,744,974	82,749,980	82,751,437	82,752,974	82,756,887	82,758,026	82,760,854	82,762,796	82,763,960	82,763,979	82,764,129	82,764,557	82,764,962	82,765,356	82,765,772	82,765,867	82,765,878	82,766,329	82,766,573	82,767,365	82,767,524	82,769,048	82,769,083	82,769,239	82,769,412	82,769,490	82,769,513	82,769,523	82,769,537	82,769,539	82,769,549	82,769,671	82,769,686	82,770,196	82,770,308	82,770,460	82,770,501	82,770,603	82,770,815	82,770,827	82,770,891	82,771,088	82,771,123	82,771,134	82,771,246	82,771,353	82,771,640	82,771,675	82,771,712	82,771,810	82,772,018	82,772,028	82,772,415	82,772,565	82,773,487	82,773,520	82,773,630	82,773,649	82,773,694	82,773,755	82,773,793	82,773,879	82,773,890	82,774,083	82,774,108	82,774,284	82,774,366	82,774,402	82,774,459	82,774,464	82,774,487	82,774,756	82,774,984	82,775,029	82,775,129	82,775,138	82,775,254	82,775,257	82,775,303	82,775,317	82,775,342	82,775,381	82,775,384	82,775,436	82,775,440	82,775,454	82,775,465	82,775,517	82,775,534	82,775,692	82,775,809	82,775,835	82,775,836	82,775,858	82,775,861	82,775,873	82,775,883	82,775,884	82,775,888	82,775,951	82,775,959	82,775,995	82,776,073	82,776,098	82,776,210	82,776,650	82,776,820	82,776,979	82,777,493	82,778,259	82,779,589	82,779,867	82,780,119	82,780,283	82,780,287	82,780,365	82,780,397	82,780,500	82,781,335	82,781,551	82,782,439	82,782,621	82,782,703	82,783,358	82,783,412	82,783,450	82,783,746	82,783,914	82,784,005	82,785,494	82,785,944	82,785,965	82,786,299	82,787,789	82,788,086	82,788,974	82,789,302	82,789,312	82,789,965	82,791,964	82,793,126	82,793,504	82,795,577	82,796,153	82,796,518	82,796,739	82,796,869	82,798,126	82,799,117	82,801,121	82,801,398	82,802,442	82,804,912	82,805,586	82,805,600	82,805,602	82,806,198	82,807,400	82,807,880	82,808,449	82,808,634	82,809,250	82,809,294	82,809,933	82,809,955	82,810,289	82,810,389	82,810,943	82,811,097	82,811,477	82,811,828	82,812,029	82,814,155	82,814,215	82,814,671	82,815,030	82,816,120	82,816,690	82,816,720	82,816,853	82,816,867	82,817,014	82,817,037	82,817,195	82,817,442	82,817,498	82,817,522	82,817,580	82,817,727	82,817,728	82,817,780	82,818,037	82,818,282	82,818,303	82,818,404	82,818,645	82,818,676	82,819,056	82,819,263	82,819,298	82,819,314	82,819,962	82,820,658	82,820,719	82,820,978
C	G	C	A	A	C	T	T	A	G	C	-	A	G	A	C	-	A	C	G	A	A	A	-	C	A	T	C	C	T	C	-	5	C	C	G	C	C	C	A	G	C	A	G	C	T	A	A	C	C	T	10	T	T	G	T	G	G/A	2	T	-	T	A	A	T	T	3	C	T	A	A	C	A	C	A/T	G	C	A	C	C	-	C	T	C	A	C	T/-	A	C	C	T	C	T	C	C	G	C	T	C	-/G	T	C	A	T	G	T	C	T	A	-	A	T	A	A	6	A	G	T	A	A	A	A	-	T	G/G	T	T	A	C/-	C	-	A	C	T	T	-	-	T	G	A	T	2	24	-/G	-/G	T	A	G	T	A	-	A	A	A	-	G	-	C	T	T	C	T	2	T	T	G	C	C	-	G	G	C	C	G	C	G	C	C	G	T	-	G	C	C	G	-	C	A	C	C	G	C	C	T	12	T	A	A	T	G	T	A	-	A	A	G	A	C	G	-	A	-	T	G	T	T	A	G	T	2	A	T	A	G	3	T	2	G	A	T	T	C	A	-	-/A	C	T	C	T	T	T	C	A	G	G	A	G	C	A	-/C	17	C/-	C	G	A	A	T	-/G	-/G	G	G	A	-	G	T	C	C	C	A	A	G	T	A	A	T	T	-	C	G	10	G	A	C	A	G	C	A	A	-/T	T/-	T	C	G	G	A	T	T	T	G	-	C	T	G	G	C	C	A	-/G	-/7	8	-	C	A	G	T	C	T	C	G	3	-	G	C	G	T	T	T/-	C	-/G	G	A	C	G	A	G	A	G	G	G	G	C	G	T	C	-	T	A/-	T	A	T	C	G	C	C	T	C	C	A	A	-	C/G	G	C	A	G	C	G	G	G	A	C	G	A	A	C	G	C	C	G	A	A	A	A	T	-	C	C	T	T	G	A	G	-	A	18	A	G	G	T	A	G	G	A	A	A	C	C	-	A	G	G	C	C	A	C	4	T	13	C	C	T	C	A	A	C	T	G	G	G	G	G	G	-	-	G	A	T	G	G	T	T	A	A	T	-	G	2	G	A	G	A	A	T	C	A	A	-	G	G	A	-	A	T	C	T	G	A	-	T	C	C	T	G	A	G	T	T	A	5	A	T	G	A	C	T	-	G	3	T	C	T	G	A	G	A	A	A	-	-	G	17	A	T	C	T	-	A	G	-	C	A	G	A	T	A	T	G	A	G	A	G	-	A	A	T	G	T	G	G	G	T	-	G	C	T	A	T	G	-	T/-	G	G	A	11	G	C	G	G