Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 15,627 (bp)   Positions: 169
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
SHRSP/A3NCrl (2019) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
Ms4a7
-
A
-
T
G
C
T
A
G
G
T
A
C
A
C
C
-
T
T
A
G
6
C
T
T
G
G
G
-
A
C
G
G
G
G
G
G
G
A
G
T
-
A
C
C
A
G
C
G
C
A
A
A
G
T
2
2
-
2
G
A
-
G
C
-
-
T
G
G
C
G
T
T
A
T
C
A
T
C
G
T
T
G
T
A
G
C
C
C
A
G
G
G
A
T
A
T
G
C
C
C
A
G
A
A
T
A
9
A
8
T
G
T
A
C
T
T
T
C
A
A
C
C
C
G
A
C
C
T
T
C
G
C
G
T
T
C
C
G
C
G
C
C
-
A
G
-
T
4
G
C
C
G
T
G
A
C
T
G
A
T
T
T
3
C
A
C
C
C
  207,969,412
  207,969,588
  207,970,358
  207,970,763
  207,971,257
  207,971,712
  207,971,719
  207,971,824
  207,971,841
  207,972,013
  207,972,071
  207,972,957
  207,972,964
  207,972,992
  207,973,432
  207,973,445
  207,973,470
  207,973,672
  207,974,019
  207,974,200
  207,974,334
  207,974,560
  207,974,580
  207,974,605
  207,974,708
  207,974,720
  207,974,771
  207,974,893
  207,975,208
  207,975,502
  207,975,571
  207,975,604
  207,976,301
  207,976,721
  207,976,769
  207,976,963
  207,977,255
  207,977,275
  207,977,310
  207,977,548
  207,977,566
  207,977,569
  207,977,572
  207,977,581
  207,977,656
  207,977,657
  207,977,697
  207,977,698
  207,977,762
  207,977,783
  207,977,872
  207,978,371
  207,978,466
  207,978,480
  207,978,509
  207,978,959
  207,978,971
  207,978,978
  207,978,983
  207,978,984
  207,979,145
  207,979,150
  207,979,158
  207,979,187
  207,979,237
  207,979,262
  207,979,298
  207,979,345
  207,979,440
  207,979,441
  207,979,500
  207,979,513
  207,979,514
  207,979,516
  207,979,554
  207,979,556
  207,979,563
  207,979,582
  207,979,589
  207,979,629
  207,979,758
  207,979,792
  207,979,823
  207,980,027
  207,980,097
  207,980,108
  207,980,119
  207,980,170
  207,980,172
  207,980,174
  207,980,183
  207,980,271
  207,980,299
  207,980,308
  207,980,310
  207,980,351
  207,980,400
  207,980,416
  207,980,424
  207,980,449
  207,980,451
  207,980,475
  207,980,587
  207,980,631
  207,980,649
  207,980,674
  207,980,724
  207,980,727
  207,980,782
  207,980,785
  207,980,831
  207,980,979
  207,981,009
  207,981,019
  207,981,196
  207,981,492
  207,981,521
  207,981,732
  207,981,894
  207,981,901
  207,981,918
  207,981,922
  207,981,923
  207,981,938
  207,982,014
  207,982,117
  207,982,120
  207,982,207
  207,982,238
  207,982,301
  207,982,575
  207,982,740
  207,982,741
  207,982,743
  207,982,753
  207,982,754
  207,982,900
  207,982,929
  207,982,932
  207,982,935
  207,982,951
  207,982,955
  207,982,960
  207,982,973
  207,983,017
  207,983,045
  207,983,112
  207,983,125
  207,983,129
  207,983,207
  207,983,252
  207,983,257
  207,983,293
  207,983,368
  207,983,522
  207,983,584
  207,983,610
  207,983,673
  207,983,764
  207,983,782
  207,983,865
  207,983,976
  207,983,999
  207,984,004
  207,984,081
  207,984,147
  207,984,327
  207,984,330
  207,984,435
A
-
3
C
A
G
G
G
A
A
C
C
A
G
T
A
7
A
C
G
A
-
T
A
G
A
A
A
G
G
T
A
A
A
A
C
A
C
T
A
C
A
T
T
T
G
T
T
T
T
G
G
C
A
A
-
2/-
-/2
-
C/-
C
T
C
T
T/T
13
C
A
A
T
A
C
C
G
C
A
T
G
T
C
C
C
A
C
T
A
T
T
T
C
A
T
A
G
C
G
A
A
T
T
A
G
A
G
G
C
-
-
C
-
C
A
C
T
T
A/-
-/C
G
G
C
T
A
G
T
A
G
A
A
C
C
T
A
A
A
C
A
A
T
A
T
A
A
T
G
G
T
11
A
-
-
T
G
-
C
A
T
G
C
C
G
-
G
A
-
T
G
T
G
A