Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 20,152 (bp)   Positions: 236
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LEXF1A/Stm (2019) 
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
Gtpbp4
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
G
G
G
C
G
T
G
G
G
A
T
C
G
T
G
T
C
-
T
G
G
G
T
T
C
G
T
T
G
G
C
C
C
A
A
A
T
C
C
-
T
7
C
G
G
G
G
A
-
T
-
G
A
G
A
-
G
A
G
G
T
G
A
T
T
A
A
C
T
G
T
13
C
-
G
C
C
C
A
3
A
A
G
G
A
G
G
C
G
T
T
A
C
C
G
T
A
A
A
A
T
-
C
A
C
A
C
T
T
T
-
G
T
A
3
-
C
G
-
T
T
C
T
T
A
C
G
C
C
A
T
A
6
A
C
T
C
G
T
A
T
A
-
6
C
C
-
T
G
T
C
A
G
C
3
C
G
G
C
C
C
G
A
T
C
A
G
15
2
T
-
T
G
C
G
C
-
A
C
T
C
G
C
G
T
G
T
T
T
T
C
A
G
T
T
T
G
C
T
A
A
G
2
G
G
G
T
3
G
G
G
A
C
G
G
A
A
C
C
C
G
G
C
C
T
A
A
C
G
C
T
C
G
T
A
  61,315,476
  61,315,523
  61,315,567
  61,315,572
  61,315,583
  61,315,586
  61,315,591
  61,315,938
  61,315,943
  61,315,989
  61,316,020
  61,316,054
  61,316,142
  61,316,203
  61,316,211
  61,316,250
  61,316,593
  61,316,595
  61,316,684
  61,316,692
  61,316,970
  61,317,104
  61,317,154
  61,317,167
  61,317,222
  61,317,255
  61,317,260
  61,317,276
  61,317,289
  61,317,380
  61,317,386
  61,317,429
  61,317,473
  61,317,524
  61,317,571
  61,317,605
  61,318,154
  61,318,390
  61,318,423
  61,318,437
  61,318,461
  61,318,561
  61,318,632
  61,318,651
  61,318,722
  61,318,755
  61,318,848
  61,318,884
  61,318,914
  61,319,148
  61,319,163
  61,319,214
  61,319,243
  61,319,357
  61,319,377
  61,319,396
  61,319,509
  61,319,518
  61,319,635
  61,319,642
  61,319,661
  61,319,722
  61,319,723
  61,319,781
  61,319,794
  61,319,887
  61,319,941
  61,319,948
  61,319,983
  61,320,041
  61,320,052
  61,320,376
  61,320,393
  61,320,424
  61,320,477
  61,320,570
  61,320,573
  61,320,595
  61,320,615
  61,320,621
  61,320,625
  61,320,661
  61,320,671
  61,320,685
  61,320,695
  61,320,712
  61,320,752
  61,320,759
  61,320,830
  61,320,857
  61,320,862
  61,320,894
  61,320,992
  61,321,021
  61,321,033
  61,321,070
  61,321,084
  61,321,089
  61,321,130
  61,321,151
  61,321,180
  61,321,192
  61,321,238
  61,321,298
  61,321,349
  61,321,350
  61,321,351
  61,321,398
  61,321,445
  61,321,462
  61,321,463
  61,321,497
  61,321,506
  61,321,507
  61,321,522
  61,321,799
  61,321,803
  61,321,811
  61,321,863
  61,321,867
  61,321,894
  61,321,909
  61,321,920
  61,321,966
  61,322,036
  61,322,040
  61,322,086
  61,322,146
  61,322,197
  61,322,231
  61,322,309
  61,322,315
  61,322,327
  61,322,337
  61,322,355
  61,322,377
  61,322,384
  61,322,458
  61,322,493
  61,322,516
  61,322,534
  61,322,536
  61,322,540
  61,322,567
  61,322,568
  61,322,636
  61,322,662
  61,322,692
  61,322,695
  61,322,709
  61,322,726
  61,322,729
  61,322,769
  61,322,789
  61,322,847
  61,322,935
  61,322,990
  61,322,998
  61,323,018
  61,323,025
  61,323,034
  61,323,083
  61,323,085
  61,323,090
  61,323,095
  61,323,127
  61,323,149
  61,323,152
  61,323,191
  61,323,241
  61,323,242
  61,323,244
  61,323,246
  61,323,247
  61,323,259
  61,323,270
  61,323,287
  61,323,291
  61,323,296
  61,323,362
  61,323,365
  61,323,497
  61,323,509
  61,323,525
  61,323,640
  61,323,648
  61,323,651
  61,323,664
  61,323,697
  61,323,807
  61,323,812
  61,323,831
  61,323,878
  61,323,958
  61,323,967
  61,323,985
  61,324,138
  61,324,143
  61,324,206
  61,324,275
  61,324,276
  61,324,384
  61,324,410
  61,324,561
  61,324,643
  61,324,644
  61,324,959
  61,325,053
  61,325,055
  61,325,418
  61,325,513
  61,325,664
  61,325,674
  61,325,689
  61,325,749
  61,325,789
  61,325,802
  61,325,813
  61,325,965
  61,326,061
  61,326,106
  61,326,116
  61,326,436
  61,326,449
  61,326,461
  61,326,631
  61,326,786
  61,326,792
  61,326,793
  61,326,804
  61,326,835
  61,326,839
  61,327,517
  61,327,528
  61,327,529
  61,327,583
C/T
G/A
G/A
G/A
C/A
G/C
T/C
-/A
G/A
G/C
A/-
T/C
C/T
G/T
T/C
G/T
T/A
C/A
-/C
T/G
G/A
G/A
G/A
T/G
T/A
C/T
G/A
T/A
T/C
G/A
G/T
C/T
C/G
C/G
C/G
A/G
A/G
T/C
C/A
C/T
-/8
T/C
7/-
C/-
G/A
G/A
G/C
G/A
A/T
-/5
T/C
-/G
G/T
A/G
G/T
A/G
T
G/T
A/G
G/T
G/C
T/C
G/A
A/C
T/C
T/C
A/-
A/G
C/T
T/G
G/C
T/C
13/-
C/T
-/2
G/T
C/A
C/T
C/T
A/G
3/-
A/G
A/T
G/A
G/A
A/G
G/A
G/A
C/A
G/A
T/G
T/C
A/T
C/T
C/T
G/A
T/C
A/G
A/C
C/T
A/-
T/A
-/2
C/G
A/C
C/T
A/G
C/G
T/A
T/C
T/G
-/3
G/A
T/G
A/G
3/-
-/5
C/T
G/C
T/T
T/G
T/A
C/T
T/C
T/C
A/G
C/T
G/A
C/T
C/T
A/G
T/C
A/G
6/-
A/G
C/A
T/C
C/A
G/A
T/-
A/T
T/G
A/C
-/C
6/-
C/T
C/T
-/G
T/C
G/A
T/A
C/T
A/C
G/C
C/A
3/-
C/G
G/C
G/C
C/A
C/G
C/A
G/A
A/G
T/C
C/T
A/G
G/A
15/-
2/-
-/C
-/2
T/C
G/A
C/T
G/T
C/T
-/5
A/G
C/G
T/-
C/T
G/A
C/T
G/-
T/G
G/T
T/C
T/G
T/C
T/G
C/T
A/G
G/A
T/G
T/C
T/C
G/A
C/G
T/G
A/G
A/-
G/A
2/-
G/A
G/C
G/C
T/-
3/-
G/C
G/A
G/T
A/G
C/T
G/A
G/C
A/G
A/C
C/T
C/T
C/T
G/C
G/A
C/-
C/T
T/-
A/-
A/C
C/T
G/C
C/T
T/G
C/A
G/T
T/G
A/G