Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 102,045 (bp)   Positions: 302
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LEXF10A/StmMcwi (2020) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC103693333
LOC103693333
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
Glra1
C
T
T
A
T
C
A
A
C
A
G
T
C
T
7
T
A
T
T
T
G
G
4
C
T
C
C
C
C
C
A
A
C
T
G
C
A
A
C
A
G
T
C
C
C
C
G
T
-
A
G
-
T
-
3
A
-
G
A
C
T
T
C
C
136
A
C
T
T
T
C
T
T
C
G
T
A
A
C
3
-
T
C
T
G
T
G
C
T
A
G
C
T
A
T
T
A
A
G
T
C
C
A
G
-
-
A
G
T
T
A
A
G
A
G
A
C
T
C
C
A
C
G
C
C
A
G
A
T
G
-
A
T
A
G
A
C
-
G
C
T
T
A
G
A
G
T
-
C
C
T
-
G
G
A
A
2
A
T
A
G
G
G
-
A
3
T
C
G
A
T
T
G
T
-
T
C
G
T
T
T
C
T
A
A
A
G
G
G
G
T
T
G
C
A
T
C
T
C
C
T
-
C
3
G
A
2
C
A
T
A
G
G
4
A
C
G
C
C
G
2
A
C
C
8
A
A
-
C
A
T
G
C
T
T
T
C
G
T
G
T
A
T
C
C
A
G
C
G
A
G
A
T
C
C
-
T
G
A
A
G
C
T
A
G
G
A
-
A
T
G
A
8
G
C
C
C
-
G
G
C
A
T
G
A
T
T
T
T
2
A
A
T
A
T
C
C
T
T
C
T
C
  39,628,433
  39,629,448
  39,629,457
  39,629,899
  39,633,259
  39,633,293
  39,633,584
  39,633,667
  39,633,895
  39,634,341
  39,634,695
  39,637,560
  39,638,703
  39,639,035
  39,639,072
  39,639,257
  39,639,835
  39,643,060
  39,643,155
  39,643,247
  39,643,434
  39,643,762
  39,643,871
  39,643,876
  39,643,881
  39,643,890
  39,643,906
  39,643,912
  39,643,914
  39,643,918
  39,644,178
  39,644,771
  39,644,938
  39,645,346
  39,645,864
  39,645,939
  39,646,234
  39,646,298
  39,646,316
  39,646,373
  39,646,402
  39,646,474
  39,646,583
  39,646,585
  39,646,594
  39,646,604
  39,646,642
  39,646,800
  39,647,013
  39,647,175
  39,647,282
  39,647,580
  39,648,095
  39,648,360
  39,648,392
  39,649,627
  39,649,722
  39,649,824
  39,651,125
  39,652,967
  39,653,291
  39,653,552
  39,653,628
  39,653,630
  39,653,713
  39,653,718
  39,653,723
  39,653,741
  39,653,797
  39,653,833
  39,653,845
  39,654,335
  39,655,004
  39,655,080
  39,656,353
  39,656,758
  39,657,723
  39,658,751
  39,658,924
  39,658,931
  39,658,953
  39,659,010
  39,659,176
  39,659,250
  39,659,315
  39,659,327
  39,659,825
  39,659,930
  39,660,045
  39,660,050
  39,660,281
  39,660,358
  39,660,404
  39,661,384
  39,661,385
  39,662,197
  39,662,215
  39,662,288
  39,662,479
  39,662,614
  39,663,482
  39,663,508
  39,663,814
  39,664,662
  39,664,856
  39,664,859
  39,664,909
  39,665,476
  39,666,056
  39,666,284
  39,666,287
  39,666,295
  39,666,406
  39,666,569
  39,666,589
  39,666,696
  39,666,764
  39,666,784
  39,666,872
  39,666,951
  39,667,077
  39,667,385
  39,667,433
  39,667,645
  39,667,842
  39,667,893
  39,667,969
  39,668,158
  39,668,218
  39,668,252
  39,668,407
  39,668,432
  39,668,669
  39,668,672
  39,668,785
  39,669,080
  39,669,249
  39,669,414
  39,669,668
  39,669,730
  39,669,801
  39,669,912
  39,670,171
  39,670,212
  39,670,292
  39,670,323
  39,670,561
  39,670,810
  39,670,905
  39,671,188
  39,671,196
  39,671,591
  39,671,960
  39,671,991
  39,672,048
  39,672,296
  39,672,357
  39,672,362
  39,672,822
  39,673,156
  39,673,309
  39,673,709
  39,673,781
  39,673,973
  39,674,170
  39,674,284
  39,674,457
  39,674,544
  39,675,299
  39,675,649
  39,676,531
  39,682,774
  39,682,926
  39,683,086
  39,683,177
  39,683,272
  39,683,453
  39,683,706
  39,684,081
  39,684,558
  39,684,871
  39,685,470
  39,685,684
  39,685,755
  39,685,760
  39,686,698
  39,686,702
  39,686,764
  39,686,766
  39,686,768
  39,686,864
  39,687,002
  39,687,281
  39,688,076
  39,688,909
  39,689,090
  39,689,210
  39,689,219
  39,689,630
  39,689,709
  39,689,951
  39,690,071
  39,690,289
  39,690,306
  39,690,307
  39,690,308
  39,690,325
  39,690,356
  39,690,985
  39,691,057
  39,691,205
  39,691,430
  39,691,674
  39,692,052
  39,692,074
  39,692,116
  39,693,408
  39,693,737
  39,694,982
  39,695,526
  39,695,688
  39,695,943
  39,698,537
  39,698,718
  39,699,953
  39,700,672
  39,704,038
  39,705,429
  39,705,986
  39,706,406
  39,706,569
  39,706,572
  39,707,015
  39,707,110
  39,707,189
  39,707,223
  39,707,249
  39,707,379
  39,707,632
  39,707,708
  39,708,041
  39,708,389
  39,708,596
  39,709,469
  39,709,486
  39,709,552
  39,709,977
  39,709,991
  39,710,173
  39,710,180
  39,710,196
  39,710,237
  39,710,278
  39,710,512
  39,710,823
  39,710,860
  39,711,008
  39,711,067
  39,711,168
  39,711,199
  39,711,217
  39,711,590
  39,711,629
  39,712,067
  39,712,132
  39,712,235
  39,712,304
  39,712,562
  39,712,563
  39,712,832
  39,712,889
  39,713,440
  39,713,880
  39,713,905
  39,714,137
  39,714,138
  39,714,524
  39,715,068
  39,715,125
  39,716,777
  39,718,236
  39,718,402
  39,718,684
  39,718,761
  39,719,098
  39,720,614
  39,720,856
  39,720,898
  39,722,693
  39,722,778
  39,722,780
  39,722,913
  39,723,535
  39,723,969
  39,724,198
  39,724,331
  39,724,984
  39,725,269
  39,725,583
  39,725,852
  39,726,649
  39,727,861
T
-
G
G
C
T
G
T
A
-
A
C
A
C
-
C
G
C
C
C
A
A
-
T
C
T
A
C/T
C/T
C/T
-/T
C
T
C
A
T
G
G
T
G
A
C
T
A
T
T
A
C
T
G
A
T
C
2
-
G
G
A
G
T
C
C
T
T
-
G/-
-/T
-/G
-/C
C/-
A/-
C
C
A
A
A
C
G
G
-
2
C
G
C
A
G
A
A
C
G
A
T
C
G
A
C
T/G
C/T
T
C
T
T
G
A
9
T/T
T
A
C
C
G
G
A
G
A
G
T
A
T
T
T
A
A
A
T
G
T
G
A
A
4
G
C
G
C
T
A
2
A
A
C
C
G
C
G
A
C
2
T
T
C
4
A
A
G
G
-
C
C
G
A
C
T
C
G
-
C
A
A
G
C
C
T
C
2
G
G
A
C
G
C
-/A
G
-
G
G/-
-/A
A/-
-/A
A/-
C
C
A
T
-/G
C
T
G
A
G
G
9
A
3/-
-/T
-/C
2/-
A
G
C
G
A
A
-
-/T
T
C
T
-
A
-
G
A
T
-
G
G
4
A
G
A
A
T
C
A
G
T
A
C
A
C
G
C
T
A
C
A
G
A
G
C
G
C
T
T
3
C
A
G
T
A
T
G
G
T
A
T
C
T
-/C
T/C
T/-
-
A
-
G
T
G
A
A
T
G
C
C
G
C
C
C
C
-
C
C
-
T
C
T
T
G
A
T
C
G