Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 191,348 (bp)   Positions: 323
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
MR/N (2020) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
Dlg1
2
G
T
-
-
-
G
G
A
G
G
G
C
T
G
C
-
T
G
-
C
T
T
C
C
C
G
C
C
-
T
A
G
C
C
G
-
-
C
G
-
A
C
C
A
T
C
G
G
-
C
C
T
A
G
T
G
C
A
A
A
T
A
T
A
-
3
G
C
A
G
G
C
C
C
C
A
C
A
-
C
A
C
C
C
T
-
C
C
T
T
A
A
C
T
3
T
C
T
-
-
T
T
-
-
T
C
T
T
A
T
C
T
A
T
T
-
T
T
T
C
-
A
A
-
C
A
C
G
A
G
G
7
A
T
G
C
T
T
A
C
2
T
T
C
A
-
C
C
G
C
C
G
A
C
A
T
T
-
A
A
T
T
T
T
T
A
-
3
C
-
A
-
T
T
T
T
G
C
G
A
A
C
A
A
2
G
C
T
A
4
C
C
3
A
C
A
T
T
G
A
-
C
C
C
T
A
T
A
G
A
G
A
A
A
A
A
A
A
A
A
T
-
G
A
A
A
G
A
G
G
G
A
T
T
A
C
T
T
G
A
2
5
G
A
G
A
C
C
C
C
A
G
G
A
C
C
30
A
6
C
T
G
2
A
C
-
T
A
G
T
T
A
G
G
G
G
G
C
T
C
C
8
G
-
G
-
T
C
T
T
G
G
2
A
C
-
9
G
A
-
G
T
C
C
C
-
T
2
-
5
T
-
T
A
-
T
A
A
A
G
T
-
  68,912,505
  68,912,727
  68,914,768
  68,914,889
  68,915,324
  68,915,328
  68,916,273
  68,916,894
  68,917,162
  68,917,861
  68,917,932
  68,917,966
  68,919,163
  68,919,234
  68,919,331
  68,919,338
  68,919,497
  68,919,534
  68,919,580
  68,919,973
  68,920,925
  68,921,032
  68,921,220
  68,921,499
  68,921,785
  68,921,876
  68,922,528
  68,922,618
  68,922,650
  68,922,990
  68,924,477
  68,925,062
  68,925,173
  68,925,704
  68,926,148
  68,926,217
  68,926,331
  68,926,338
  68,926,346
  68,927,448
  68,929,437
  68,929,520
  68,930,161
  68,930,821
  68,930,893
  68,931,278
  68,934,291
  68,934,524
  68,934,620
  68,935,320
  68,935,367
  68,936,038
  68,936,707
  68,937,183
  68,937,591
  68,937,639
  68,937,716
  68,939,803
  68,940,287
  68,940,295
  68,941,301
  68,941,516
  68,942,087
  68,942,255
  68,942,623
  68,943,043
  68,943,049
  68,944,318
  68,944,483
  68,944,639
  68,945,285
  68,945,494
  68,945,575
  68,947,986
  68,948,465
  68,949,125
  68,949,514
  68,950,586
  68,950,847
  68,950,985
  68,951,036
  68,951,040
  68,951,213
  68,952,690
  68,953,710
  68,953,752
  68,953,934
  68,954,064
  68,954,250
  68,954,254
  68,954,450
  68,954,456
  68,954,468
  68,954,470
  68,954,490
  68,954,492
  68,954,510
  68,954,518
  68,954,558
  68,955,005
  68,955,141
  68,955,572
  68,955,798
  68,955,882
  68,956,635
  68,956,676
  68,956,719
  68,957,642
  68,957,775
  68,957,970
  68,958,596
  68,959,113
  68,959,426
  68,960,224
  68,961,371
  68,961,955
  68,962,402
  68,964,112
  68,964,699
  68,965,845
  68,966,078
  68,966,096
  68,967,164
  68,967,239
  68,967,369
  68,968,233
  68,968,363
  68,969,163
  68,969,637
  68,970,694
  68,971,311
  68,972,658
  68,973,454
  68,973,495
  68,973,603
  68,974,536
  68,974,537
  68,974,538
  68,978,615
  68,978,925
  68,979,427
  68,980,551
  68,980,903
  68,981,318
  68,981,380
  68,981,779
  68,981,825
  68,982,282
  68,982,653
  68,982,771
  68,982,898
  68,983,512
  68,983,657
  68,984,250
  68,984,352
  68,985,211
  68,985,602
  68,985,890
  68,986,261
  68,986,457
  68,987,218
  68,988,603
  68,988,859
  68,990,152
  68,990,203
  68,990,834
  68,991,297
  68,991,304
  68,991,307
  68,991,332
  68,991,341
  68,992,298
  68,994,027
  68,994,695
  68,994,912
  68,995,550
  68,995,551
  68,996,138
  68,997,668
  68,998,142
  68,998,689
  68,999,082
  68,999,917
  68,999,954
  69,001,410
  69,001,962
  69,001,966
  69,002,393
  69,002,860
  69,005,453
  69,005,590
  69,005,689
  69,006,116
  69,007,466
  69,007,531
  69,007,888
  69,008,061
  69,008,217
  69,008,510
  69,008,569
  69,008,592
  69,008,719
  69,008,924
  69,009,058
  69,010,496
  69,010,615
  69,011,422
  69,011,797
  69,012,227
  69,013,024
  69,013,887
  69,013,982
  69,014,214
  69,014,648
  69,014,652
  69,015,109
  69,015,113
  69,015,367
  69,015,384
  69,015,412
  69,015,444
  69,015,457
  69,017,195
  69,019,292
  69,020,559
  69,020,560
  69,023,978
  69,024,631
  69,026,346
  69,026,422
  69,030,353
  69,030,645
  69,031,635
  69,032,857
  69,032,893
  69,033,834
  69,040,369
  69,040,375
  69,041,109
  69,042,288
  69,042,362
  69,043,738
  69,043,755
  69,044,044
  69,044,061
  69,044,072
  69,044,743
  69,044,771
  69,044,795
  69,044,797
  69,044,953
  69,044,969
  69,045,112
  69,046,176
  69,046,512
  69,047,283
  69,047,928
  69,049,510
  69,049,875
  69,049,959
  69,051,440
  69,052,414
  69,053,517
  69,054,496
  69,054,497
  69,056,724
  69,057,552
  69,057,762
  69,059,565
  69,059,822
  69,060,827
  69,062,302
  69,062,672
  69,064,609
  69,064,611
  69,064,613
  69,064,615
  69,064,617
  69,065,676
  69,067,570
  69,068,267
  69,069,383
  69,071,826
  69,071,833
  69,073,110
  69,073,760
  69,074,860
  69,074,861
  69,076,041
  69,078,651
  69,079,036
  69,079,687
  69,081,149
  69,081,154
  69,081,443
  69,082,568
  69,082,718
  69,085,846
  69,086,190
  69,086,351
  69,086,635
  69,087,282
  69,087,571
  69,090,194
  69,093,856
  69,093,857
  69,093,861
  69,093,865
  69,093,868
  69,093,871
  69,093,874
  69,093,891
  69,093,925
  69,093,930
  69,094,176
  69,096,451
  69,096,662
  69,097,160
  69,097,161
  69,097,162
  69,099,641
  69,103,104
  69,103,136
-
A
C/-
T
A
2
A
C
G
A
A
A
G
C
A
T
2
C
A
3
T
C
C
T
G
T
T
T
T
9
C
G
T
T
T
T
T
T
T
A
A
G
G
T
-
C
-
A
A
3
T
T
C
T
A
C
A
T
C
G
G
G
-
C
G
8
-
A
T
T
T
A
T
T
T
A
G
T
G
A
G
T
G
T
T
-
12
T/-
T
C
C/-
-/G
G
T
-/C
-
C
T
C
4
T
C
C
G
4
C
T
C
G
C
C
T
A
-/T
C
C
T
C
C
G
A
4
G
G
A
T
G
T
-
T
A
A
-
G
C
A
T
C
C
-
G
-
C
C
T
-
5
T
T
C
A
T
A
G
T
G
C
C
3
C
T
C
C
C
C
G
C
4
-
T
A
C
C
A
C
C
C
A
T
A
G
-
T
G
G
-
T
A
-
G
-
T
T
-
T
T
G
C
C
A
T
4
A
T
T
C
C
C
G
A
G
C
T
T/-
G/T
-
G
-
C
G
C
C
A
-
T
T
-/G
A
G
A
A
A
G
-
C
G
T
C
C/-
-
-
-
-
A
G
A
G
T
-/T
T
T
G
A
C
C
T
G
-
G
6/-
T
C
C
-
C/-
G
12
C
G
-
A
G/-
G
-/C
-/C
C/-
-/C
-/C
T
C
G
T
-
-/A
2
A
A
A/-
G
C
G
T
A
-
C
T
T
-
A
G
T
A
C
T
T
A
2
C
-
G
-
C
A
C
G
5
C
C/-
-/C
C/-
A
C
4