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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 149,394 (bp)   Positions: 372
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
WN/N (2020) 
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Col5a2
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Col5a2
Col5a2
Col5a2
Col5a2
Col5a2
Col5a2
Col5a2
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Col5a2
Col5a2
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Col5a2
Col5a2
Col5a2
2
C
A
C
C
A
A
A
C
G
A
G
C
T
C
T
T
48
T
A
T
A
-
C
2
T
T
A
4
A
C
-
A
T
T
C
G
T
T
G
C
C
G
A
G
-
A
A
C
T
A
12
A
G
A
C
G
C
T
A
A
A
A
A
-
T
T
A
A
C
-
A
A
C
G
C
G
T
T
A
A
A
A
G
A
G
C
C
C
C
-
A
C
T
C
G
-
C
T
A
3
-
G
T
T
G
C
G
C
A
G
A
A
-
T
C
C
2
C
A
T
G
G
C
A
T
T
C
T
T
C
G
G
G
G
G
G
T
T
A
T
A
A
T
C
T
G
G
A
-
T
G
T
T
G
T
A
A
-
T
A
T
A
G
A
T
A
C
A
T
C
T
C
G
T
G
C
A
G
G
G
C
C
A
T
G
C
-
2
6
G
T
C
T
A
G
G
C
G
2
C
G
G
G
C
A
A
C
A
A
C
G
A
C
T
A
G
A
T
G
C
C
-
A
C
C
-
T
G
C
G
T
A
C
G
C
A
G
G
-
C
T
C
G
G
2
G
G
T
A
G
A
T
C
G
T
T
A
T
-
T
C
A
T
G
C
A
A
G
A
T
C
A
C
A
C
97
A
C
T
G
T
8
-
A
T
G
G
C
C
G
G
C
-
T
A
C
A
G
C
A
C
C
-
G
A
3
C
T
A
C
T
C
T
C
G
A
T
A
A
A
G
G
G
T
A
A
C
C
G
C
G
T
T
G
T
T
A
C
A
C
C
G
G
2
A
C
A
C
C
T
C
G
G
C
C
2
T
C
C
-
T
G
C
A
A
A
G
A
A
C
A
  47,450,728
  47,450,729
  47,451,747
  47,452,363
  47,453,592
  47,454,651
  47,455,684
  47,455,779
  47,455,850
  47,455,880
  47,455,902
  47,457,241
  47,457,828
  47,458,043
  47,458,510
  47,458,536
  47,459,963
  47,460,192
  47,461,763
  47,462,661
  47,463,029
  47,465,360
  47,465,432
  47,466,018
  47,466,109
  47,466,134
  47,466,142
  47,466,460
  47,466,482
  47,466,586
  47,467,419
  47,469,101
  47,469,104
  47,470,128
  47,470,350
  47,470,465
  47,470,849
  47,471,280
  47,471,306
  47,471,883
  47,472,161
  47,472,232
  47,473,014
  47,473,108
  47,473,485
  47,473,498
  47,473,584
  47,475,377
  47,475,895
  47,478,583
  47,479,719
  47,479,766
  47,479,826
  47,480,171
  47,480,311
  47,481,719
  47,481,916
  47,482,171
  47,483,011
  47,483,076
  47,483,167
  47,483,321
  47,483,341
  47,484,003
  47,484,266
  47,485,925
  47,488,466
  47,489,713
  47,490,478
  47,496,274
  47,503,211
  47,503,219
  47,503,222
  47,503,798
  47,507,825
  47,508,196
  47,511,723
  47,511,957
  47,515,086
  47,521,829
  47,521,833
  47,521,834
  47,521,835
  47,522,486
  47,522,516
  47,522,551
  47,522,981
  47,523,565
  47,523,923
  47,524,032
  47,524,170
  47,524,230
  47,524,250
  47,525,077
  47,525,883
  47,526,473
  47,526,865
  47,526,984
  47,527,250
  47,527,647
  47,528,422
  47,529,087
  47,529,090
  47,529,200
  47,529,897
  47,529,904
  47,531,059
  47,531,074
  47,531,763
  47,533,232
  47,533,661
  47,534,105
  47,534,533
  47,536,148
  47,537,466
  47,537,582
  47,537,782
  47,538,059
  47,542,590
  47,542,925
  47,543,489
  47,543,607
  47,543,693
  47,543,799
  47,543,860
  47,543,997
  47,544,089
  47,544,452
  47,544,828
  47,544,932
  47,545,064
  47,545,253
  47,545,343
  47,545,345
  47,545,347
  47,545,349
  47,545,351
  47,545,394
  47,545,438
  47,545,774
  47,545,935
  47,546,007
  47,546,174
  47,546,203
  47,546,361
  47,546,369
  47,546,394
  47,546,518
  47,546,567
  47,546,651
  47,546,657
  47,546,697
  47,546,807
  47,546,813
  47,546,829
  47,546,880
  47,546,891
  47,546,932
  47,546,949
  47,546,969
  47,546,985
  47,547,001
  47,547,115
  47,547,373
  47,547,445
  47,547,785
  47,547,794
  47,547,866
  47,548,090
  47,548,766
  47,548,777
  47,549,071
  47,549,152
  47,549,256
  47,549,319
  47,549,381
  47,551,304
  47,551,663
  47,551,690
  47,552,105
  47,552,146
  47,552,268
  47,552,296
  47,552,331
  47,552,602
  47,553,753
  47,554,016
  47,555,026
  47,555,028
  47,555,094
  47,555,258
  47,555,278
  47,556,382
  47,556,554
  47,557,235
  47,557,397
  47,557,707
  47,557,957
  47,558,267
  47,559,018
  47,559,931
  47,559,956
  47,560,390
  47,560,391
  47,560,914
  47,561,073
  47,562,411
  47,562,700
  47,562,901
  47,562,981
  47,563,665
  47,564,033
  47,564,051
  47,564,251
  47,565,056
  47,565,652
  47,566,439
  47,566,498
  47,567,606
  47,567,874
  47,568,935
  47,569,192
  47,570,897
  47,575,101
  47,575,529
  47,580,267
  47,580,483
  47,580,594
  47,580,628
  47,580,900
  47,581,449
  47,581,543
  47,581,952
  47,582,020
  47,582,279
  47,582,642
  47,582,688
  47,582,719
  47,582,886
  47,582,961
  47,583,019
  47,583,041
  47,583,100
  47,583,145
  47,583,475
  47,583,508
  47,583,557
  47,583,561
  47,583,659
  47,583,669
  47,583,751
  47,583,791
  47,583,810
  47,584,210
  47,584,313
  47,584,331
  47,584,357
  47,584,415
  47,584,547
  47,584,709
  47,584,734
  47,584,738
  47,584,871
  47,585,162
  47,585,500
  47,585,506
  47,585,527
  47,585,542
  47,585,644
  47,585,661
  47,585,667
  47,585,731
  47,585,760
  47,585,779
  47,585,969
  47,586,025
  47,586,097
  47,586,147
  47,586,591
  47,586,730
  47,586,783
  47,586,879
  47,586,933
  47,586,980
  47,587,124
  47,587,666
  47,588,017
  47,588,302
  47,588,333
  47,588,392
  47,588,488
  47,588,584
  47,588,689
  47,588,692
  47,588,711
  47,588,718
  47,588,724
  47,588,970
  47,589,072
  47,589,176
  47,589,195
  47,589,236
  47,589,237
  47,589,564
  47,589,789
  47,589,878
  47,590,102
  47,590,179
  47,590,193
  47,590,202
  47,590,206
  47,590,370
  47,590,388
  47,590,443
  47,590,492
  47,590,551
  47,590,559
  47,590,606
  47,590,609
  47,590,762
  47,590,765
  47,590,775
  47,590,802
  47,590,828
  47,590,844
  47,590,857
  47,590,864
  47,590,890
  47,590,903
  47,591,014
  47,591,016
  47,591,239
  47,591,242
  47,591,306
  47,591,379
  47,591,594
  47,591,813
  47,591,885
  47,591,967
  47,592,063
  47,592,125
  47,592,169
  47,592,176
  47,592,239
  47,592,370
  47,592,417
  47,592,441
  47,592,511
  47,592,645
  47,592,752
  47,593,132
  47,593,325
  47,593,361
  47,593,432
  47,593,484
  47,593,784
  47,593,794
  47,593,920
  47,593,978
  47,594,019
  47,594,060
  47,594,298
  47,594,752
  47,595,008
  47,595,114
  47,595,128
  47,595,479
  47,596,229
  47,596,492
  47,596,604
  47,597,520
  47,597,940
-
-/A
G
T
G
G
G
C
A
A
T
C
T
G
A
C
C
-
C
G
C
C
T
G
-
-/C
C
G
-
-/C
T
C
C
G
C
G
A
A
A
C
T
T
T
C
A
G
C
G
G
C
G
-
G
A
G
T
C
T
A
G
C
G
G
G
A
C
C
-
G
T
7
G/-
G/-
T
A
T
-
A
C
T/-
T/-
T/-
T/-
A/-
G/-
A
G
T
G
T
A
T
T/G
A
T
A
T
-
C
G
-
10/G
-
G
C
A
A
A
A
G
A
C
G
A
A
T
T
-
T
T
C
C
A
T
C
G
C
T
C
A
A
C
-/T
T
T
T
A
G
C
C
G
G
G
C
G
C
A
T
C
C
C
A
C
G
-
C
G
G
6
C
C
C
C
C
-
A
T
T
G
C
T
C
T
A
C
T
A
G
T
A
A
G
T
G
-
T
T
26
-
-
A
G
A
C
T
C
T
G
T
2/-
A
A
C
T
-
T/-
G
T
G
G
G
A/-
T
A
-
T
A
C
C
C
A
A
C
G
T
A
A
C
A
T
A
C
A/G
C/G
A
A
T
A
T
A
-
C
A
T
A
-
A/-
-/A
C
T
C
-
C
T
A
C
A
G
C
T
C
T
-
C
A
T
C
T
A
G
C
A
G
T
G
G
-
T/-
A
G
A
A
-
T
C
-
T
A
T
T
A
A
T
3
C
G
T
G
C
T
G
G
T
2
A
G
-
T
C
-
T
A
A
A
T
T
G
C
G
G
G
A
A
A
G
G
T
G
A
A
T
C
A
G
T
C
C
G
A
T
T
T
A
C
-
G
T
G
T
T
C
T
A
T
T
T
-
C
T
T
G
C
A
A
A/-
-/G
G
T
C
-
T
G